Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.0e-177 624.4 328 100.0
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 2.5e-59 233.4 221 54.3
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 6.1e-58 228.8 221 53.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.4e-57 227.6 221 55.2
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 4.4e-56 222.6 223 50.7
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 4.4e-56 222.6 214 55.1
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.7e-55 220.7 234 50.9
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.2e-55 220.3 221 52.9
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 6.3e-55 218.8 221 53.8
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 8.2e-55 218.4 224 54.0
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.4e-54 217.6 221 52.9
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 3.1e-54 216.5 214 55.6
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 9.1e-54 214.9 230 49.6
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 9.1e-54 214.9 222 50.9
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 1.2e-53 214.5 221 49.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 1.2e-53 214.5 221 53.8
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.0e-53 213.8 222 51.4
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 2.0e-53 213.8 221 49.3
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 2.0e-53 213.8 220 51.8
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.0e-53 213.8 221 52.5
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.4e-53 213.0 220 51.8
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 4.5e-53 212.6 221 49.3
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 4.5e-53 212.6 221 51.1
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.5e-53 212.6 220 51.8
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 5.9e-53 212.2 224 50.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 5.9e-53 212.2 232 47.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 5.9e-53 212.2 223 48.9
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 5.9e-53 212.2 221 51.1
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.3e-52 211.1 223 51.6
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.7e-52 210.7 221 52.0
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.7e-52 210.7 220 51.4
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.7e-52 210.7 221 51.6
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 2.2e-52 210.3 222 49.5
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 2.9e-52 209.9 224 50.4
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 2.9e-52 209.9 223 48.0
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 3.8e-52 209.5 228 50.4
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 5.0e-52 209.1 224 51.3
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 5.0e-52 209.1 221 49.3
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 6.5e-52 208.8 224 50.0
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 6.5e-52 208.8 224 50.0
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 8.5e-52 208.4 224 50.0
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 8.5e-52 208.4 221 51.1
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 8.5e-52 208.4 221 49.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 8.5e-52 208.4 222 50.9
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.4e-51 207.6 221 51.6
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.4e-51 207.6 221 51.1
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.4e-51 207.6 221 50.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.9e-51 207.2 222 49.5
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.9e-51 207.2 223 51.1
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 4.2e-51 206.1 224 50.0
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 5.5e-51 205.7 220 49.1
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 9.4e-51 204.9 224 49.6
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.2e-50 204.5 221 50.7
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.2e-50 204.5 221 48.4
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.2e-50 204.5 219 47.0
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.6e-50 204.1 220 48.2
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.1e-50 203.8 220 51.4
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.1e-50 203.8 222 51.8
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.7e-50 203.4 223 48.4
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.7e-50 203.4 221 48.4
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 2.7e-50 203.4 220 49.5
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.7e-50 203.4 221 48.0
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.6e-50 203.0 220 49.1
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 4.7e-50 202.6 221 49.3
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 6.1e-50 202.2 221 48.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.8e-49 200.7 221 51.1
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.9e-49 199.5 221 49.3
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.2e-49 199.1 220 47.3
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 5.2e-49 199.1 214 49.5
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.1e-48 198.0 214 48.1
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.1e-48 198.0 221 49.8
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.5e-48 197.6 221 48.9
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 1.5e-48 197.6 220 47.7
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.5e-48 197.6 220 48.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.0e-48 197.2 211 48.3
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 4.4e-48 196.1 220 45.5
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 4.4e-48 196.1 247 45.3
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 7.4e-48 195.3 234 44.4
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.7e-48 194.9 221 47.5
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.3e-47 194.5 232 47.0
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.3e-47 194.5 220 47.3
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.7e-47 194.1 220 48.6
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.8e-47 193.4 201 50.2
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 2.8e-47 193.4 220 48.2
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 6.3e-47 192.2 220 45.5
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.3e-47 192.2 214 48.6
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.1e-46 191.4 220 49.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.8e-46 190.7 220 45.9
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.8e-46 190.7 214 49.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.8e-46 190.7 183 52.5
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.5e-45 186.4 232 45.3
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.5e-45 186.4 220 47.3
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.3e-44 184.5 220 47.3
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.7e-44 184.1 218 45.9
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 2.9e-44 183.3 220 46.8
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 8.5e-44 181.8 230 45.7
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.2e-43 179.5 257 42.4
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.6e-42 176.4 216 45.8
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 3.6e-42 176.4 272 40.8
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 2.3e-41 173.7 222 45.5
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.3e-39 165.6 221 42.5
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 6.3e-39 165.6 221 44.3
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.3e-36 157.9 220 40.9
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.9e-36 156.8 213 42.3
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.5e-36 155.6 190 45.3
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 7.2e-35 152.1 209 43.5
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 9.4e-35 151.8 214 40.7
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 3.7e-23 113.2 114 51.8
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 5.0e-20 102.8 128 46.9
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.0e-16 90.9 103 46.6
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 6.4e-15 85.9 144 37.5
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.0e-09 68.6 41 78.0
SEGI_14072 Sequoiadendron giganteum HOM05D003215 ORTHO05D003735 1.4e-09 68.2 51 68.6
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.8e-09 65.9 81 40.7
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.6e-08 63.9 72 51.4


User provided reference genes

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