Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17770 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.1e-97 359.8 298 100.0
SEGI_27814 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.5e-63 247.3 305 63.9
SEGI_05036 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.0e-44 183.7 283 52.3
SEGI_27931 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.9e-42 177.2 273 53.5
SEGI_35972 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.7e-41 173.3 276 52.2
SEGI_20107 Sequoiadendron giganteum HOM05D040372 ORTHO05D011908 5.6e-26 122.5 129 77.5
SEGI_22282 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.5e-23 112.1 79 69.6
SEGI_07878 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.9e-11 73.2 75 46.7
SEGI_16220 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.6e-11 72.0 72 48.6
SEGI_33735 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.6e-11 72.0 66 57.6
Sed0012359 Sechium edule HOM05D000071 ORTHO05D000029 1.5e-10 71.2 219 23.7
Ciclev10024087m.g Citrus clementina HOM05D000053 ORTHO05D000035 3.6e-09 66.6 222 26.6
Eucgr.E00143 Eucalyptus grandis HOM05D000053 ORTHO05D000035 4.7e-09 66.2 219 28.3
Eucgr.E01223 Eucalyptus grandis HOM05D000053 ORTHO05D000035 4.7e-09 66.2 226 28.3
Eucgr.E00148 Eucalyptus grandis HOM05D000053 ORTHO05D000035 6.2e-09 65.9 221 28.1
GSVIVG01030341001 Vitis vinifera HOM05D000053 ORTHO05D000448 1.1e-08 65.1 203 28.1
SEGI_25326 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.8e-08 64.3 286 36.0
Duzib138G1125 Durio zibethinus HOM05D000053 ORTHO05D000035 2.3e-08 63.9 224 25.4
SEGI_27319 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 3.1e-08 63.5 68 48.5
CSS0007788 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 8.9e-08 62.0 211 32.7
Eucgr.L00863 Eucalyptus grandis HOM05D000053 ORTHO05D000035 8.9e-08 62.0 222 25.2
SEGI_10182 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 8.9e-08 62.0 244 24.6
arahy.Tifrunner.gnm1.ann1.HM3IZV Arachis hypogaea HOM05D000053 ORTHO05D000035 1.2e-07 61.6 234 23.9
Ciclev10023810m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.2e-07 61.6 222 25.7
Duzib213G0190 Durio zibethinus HOM05D000053 ORTHO05D000035 1.5e-07 61.2 233 27.0
Eucgr.F00295 Eucalyptus grandis HOM05D000053 ORTHO05D000035 1.5e-07 61.2 190 24.2
Atru.chr6.2544 Acer truncatum HOM05D000071 ORTHO05D000029 2.0e-07 60.8 62 46.8
Actinidia33174 Actinidia chinensis HOM05D000071 ORTHO05D000029 2.0e-07 60.8 187 27.3
Eucgr.B00674 Eucalyptus grandis HOM05D000053 ORTHO05D000035 2.0e-07 60.8 221 26.7
Lj1A487G35 Lonicera japonica HOM05D000071 ORTHO05D000029 2.0e-07 60.8 75 45.3
PSO210G4457 Papaver somniferum HOM05D000071 ORTHO05D000029 2.0e-07 60.8 204 31.9
TPR.G32041 Trifolium pratense HOM05D000053 ORTHO05D000035 2.0e-07 60.8 229 26.2
EL10Ac3g05373 Beta vulgaris HOM05D000071 ORTHO05D000029 2.6e-07 60.5 74 44.6
Eucgr.L01193 Eucalyptus grandis HOM05D000071 ORTHO05D000029 2.6e-07 60.5 74 40.5
FvH4_5g20780 Fragaria vesca HOM05D000071 ORTHO05D000029 2.6e-07 60.5 224 26.8
FAN18G4569 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.6e-07 60.5 224 26.8
arahy.Tifrunner.gnm1.ann1.RES0SR Arachis hypogaea HOM05D000053 ORTHO05D000035 3.4e-07 60.1 234 23.9
Eucgr.F00522 Eucalyptus grandis HOM05D000053 ORTHO05D000035 3.4e-07 60.1 205 28.3
Eucgr.L01192 Eucalyptus grandis HOM05D000071 ORTHO05D000029 3.4e-07 60.1 74 40.5
Medtr7g009450 Medicago truncatula HOM05D000053 ORTHO05D000035 3.4e-07 60.1 221 26.2
SalBow7G1435 Salvia bowleyana HOM05D004358 ORTHO05D004960 3.4e-07 60.1 205 28.8
SEGI_04932 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 3.4e-07 60.1 65 44.6
SEGI_13181 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 3.4e-07 60.1 62 43.5
SEGI_22638 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 3.4e-07 60.1 75 42.7
SEGI_23430 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.4e-07 60.1 213 25.4
Hma1.2p1_0453F.1_g156120 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 5.8e-07 59.3 205 28.8
SEGI_31982 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 5.8e-07 59.3 101 35.6
SEGI_34046 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.8e-07 59.3 205 27.8
Sopen12g007020 Solanum pennellii HOM05D000053 ORTHO05D000035 5.8e-07 59.3 221 24.9
Dinv06390 Davidia involucrata HOM05D000071 ORTHO05D000029 7.6e-07 58.9 66 47.0
Gohir.A01G054800 Gossypium hirsutum HOM05D000053 ORTHO05D000035 7.6e-07 58.9 222 27.5
Gohir.D11G262200 Gossypium hirsutum HOM05D000053 ORTHO05D000035 7.6e-07 58.9 228 24.6
Lj1C490T0 Lonicera japonica HOM05D000071 ORTHO05D000029 7.6e-07 58.9 67 47.8
Lj1P487T12 Lonicera japonica HOM05D000071 ORTHO05D000029 7.6e-07 58.9 70 47.1
Lju1964C0T10 Lonicera japonica HOM05D000071 ORTHO05D000029 7.6e-07 58.9 69 46.4
Psat5g105920 Pisum sativum HOM05D000071 ORTHO05D000029 7.6e-07 58.9 55 49.1
PGSC0003DMG400028591 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.6e-07 58.9 202 27.2
EL10Ac5g12523 Beta vulgaris HOM05D000053 ORTHO05D000448 9.9e-07 58.5 66 37.9
COL.COLO4_13600 Corchorus olitorius HOM05D004673 ORTHO05D005596 9.9e-07 58.5 65 44.6
Eucgr.E01371 Eucalyptus grandis HOM05D000053 ORTHO05D000035 9.9e-07 58.5 232 27.6
Eucgr.E01372 Eucalyptus grandis HOM05D000053 ORTHO05D000035 9.9e-07 58.5 228 28.5
Psat0s3437g0040 Pisum sativum HOM05D000071 ORTHO05D000029 9.9e-07 58.5 55 49.1
SEGI_24216 Sequoiadendron giganteum HOM05D051108 ORTHO05D011908 9.9e-07 58.5 65 43.1
SEGI_31536 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 9.9e-07 58.5 222 24.8
Atru.chr6.2539 Acer truncatum HOM05D000071 ORTHO05D000029 1.3e-06 58.2 56 48.2
Eucgr.J02330 Eucalyptus grandis HOM05D000071 ORTHO05D000029 1.3e-06 58.2 74 37.8
Lsat_1_v5_gn_2_127241 Lactuca sativa HOM05D000071 ORTHO05D000029 1.3e-06 58.2 235 26.0
Lj7P217T6 Lonicera japonica HOM05D000071 ORTHO05D000029 1.3e-06 58.2 69 46.4
SEGI_22504 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.3e-06 58.2 63 49.2
Sopen01g041940 Solanum pennellii HOM05D000053 ORTHO05D000035 1.3e-06 58.2 255 33.3
GSVIVG01030065001 Vitis vinifera HOM05D000053 ORTHO05D000035 1.3e-06 58.2 71 45.1
Gorai.007G295800 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.7e-06 57.8 75 40.0
Prupe.2G270200 Prunus persica HOM05D000071 ORTHO05D000029 1.7e-06 57.8 68 47.1
SEGI_12792 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.7e-06 57.8 72 40.3
SEGI_33040 Sequoiadendron giganteum HOM05D000004 ORTHO05D011908 1.7e-06 57.8 63 49.2
TPR.G30193 Trifolium pratense HOM05D000071 ORTHO05D000029 1.7e-06 57.8 225 23.1
Glyma.13G003500 Glycine max HOM05D000071 ORTHO05D000029 2.2e-06 57.4 64 43.8
Lj1A496T19 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 57.4 80 43.8
Lj1A504T19 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 57.4 80 43.8
Lj1A509T30 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 57.4 80 43.8
Lj1A509T32 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 57.4 80 43.8
Lj1C490T1 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 57.4 80 43.8
Lj1C509G3 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 57.4 80 43.8
Lalb_Chr18g0053621 Lupinus albus HOM05D000071 ORTHO05D000029 2.2e-06 57.4 202 28.7
Phvul.004G103300 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 2.2e-06 57.4 74 41.9
arahy.Tifrunner.gnm1.ann1.NUM2HH Arachis hypogaea HOM05D000053 ORTHO05D000035 2.9e-06 57.0 231 26.0
Gohir.D13G154000 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.9e-06 57.0 222 25.2
SEGI_26209 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.9e-06 57.0 71 43.7
SEGI_36595 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 2.9e-06 57.0 71 43.7
PGSC0003DMG400002937 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.9e-06 57.0 222 27.0
Thecc.07G121200 Theobroma cacao HOM05D000053 ORTHO05D000035 2.9e-06 57.0 227 25.1
Eucgr.F00297 Eucalyptus grandis HOM05D000053 ORTHO05D000035 3.8e-06 56.6 227 25.1
Gorai.013G174000 Gossypium raimondii HOM05D000053 ORTHO05D000035 3.8e-06 56.6 222 24.8
Medtr3g082130 Medicago truncatula HOM05D000071 ORTHO05D000029 3.8e-06 56.6 55 49.1
Medtr7g010730 Medicago truncatula HOM05D000053 ORTHO05D000035 3.8e-06 56.6 228 27.2
Os12g0222900 Oryza sativa ssp. japonica HOM05D000053 ORTHO05D000448 3.8e-06 56.6 58 53.4
QL09p046439 Quercus lobata HOM05D000053 ORTHO05D000035 3.8e-06 56.6 223 24.7
ATR0618G168 Amborella trichopoda HOM05D000053 ORTHO05D000448 4.9e-06 56.2 66 45.5
Duzib138G0611 Durio zibethinus HOM05D000053 ORTHO05D000035 4.9e-06 56.2 224 24.6
Gohir.A11G252400 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.9e-06 56.2 228 25.0
Lj1P482T11 Lonicera japonica HOM05D000071 ORTHO05D000029 4.9e-06 56.2 72 47.2
Medtr4g040330 Medicago truncatula HOM05D000071 ORTHO05D000029 4.9e-06 56.2 283 21.9
QL09p011978 Quercus lobata HOM05D000071 ORTHO05D000029 4.9e-06 56.2 59 49.2
QL11p039235 Quercus lobata HOM05D000053 ORTHO05D000035 4.9e-06 56.2 205 26.3
SEGI_02883 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 4.9e-06 56.2 56 51.8
SEGI_21198 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 4.9e-06 56.2 92 37.0
ATR0598G314 Amborella trichopoda HOM05D000311 ORTHO05D012563 6.4e-06 55.8 68 44.1
AT4G13820 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 6.4e-06 55.8 65 40.0
arahy.Tifrunner.gnm1.ann1.2E2S80 Arachis hypogaea HOM05D000053 ORTHO05D000035 6.4e-06 55.8 225 25.3
Migut.N02332 Erythranthe guttata HOM05D000071 ORTHO05D000029 6.4e-06 55.8 67 44.8
Gorai.007G281100 Gossypium raimondii HOM05D000053 ORTHO05D000035 6.4e-06 55.8 226 24.3
Medtr5g095120 Medicago truncatula HOM05D000053 ORTHO05D000035 6.4e-06 55.8 255 24.7
Phvul.004G103600 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 6.4e-06 55.8 76 39.5
SEGI_05400 Sequoiadendron giganteum HOM05D000002 ORTHO05D011908 6.4e-06 55.8 63 46.0
arahy.Tifrunner.gnm1.ann1.A0XVFN Arachis hypogaea HOM05D000053 ORTHO05D000035 8.4e-06 55.5 223 26.0
arahy.Tifrunner.gnm1.ann1.Z30F3P Arachis hypogaea HOM05D002757 ORTHO05D003252 8.4e-06 55.5 231 25.5
CSS0003259 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 8.4e-06 55.5 66 45.5
COL.COLO4_29050 Corchorus olitorius HOM05D000053 ORTHO05D000035 8.4e-06 55.5 231 24.7
SEGI_22325 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.4e-06 55.5 65 41.5
SEGI_38663 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.4e-06 55.5 65 41.5
SGA_v2.0_scaffold43G16314 Striga asiatica HOM05D000071 ORTHO05D000029 8.4e-06 55.5 179 40.8
Thecc.03G148000 Theobroma cacao HOM05D000071 ORTHO05D000029 8.4e-06 55.5 75 40.0
TAR427G0004 Trochodendron aralioides HOM05D000053 ORTHO05D000035 8.4e-06 55.5 197 27.4


User provided reference genes

Program Settings