Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 1.6e-109 399.4 196 100.0
SEGI_39326 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 7.5e-72 274.2 197 76.1
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 2.2e-15 86.7 144 41.0
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 2.2e-15 86.7 155 40.6
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 5.0e-15 85.5 207 33.8
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 3.2e-14 82.8 214 33.2
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 5.5e-14 82.0 205 33.7
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 7.2e-14 81.6 207 36.2
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.6e-13 80.5 114 44.7
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.6e-13 80.5 114 44.7
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 2.1e-13 80.1 216 34.3
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 2.1e-13 80.1 216 34.3
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 3.6e-13 79.3 200 32.5
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 3.6e-13 79.3 187 35.3
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 3.6e-13 79.3 112 43.8
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 3.6e-13 79.3 211 36.5
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 4.6e-13 79.0 203 34.0
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 1.0e-12 77.8 203 31.0
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.8e-12 77.0 198 30.3
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 2.3e-12 76.6 109 42.2
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 2.3e-12 76.6 214 32.2
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 3.0e-12 76.3 221 33.9
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 5.1e-12 75.5 172 33.7
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.8e-12 74.7 207 33.3
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 8.8e-12 74.7 209 34.4
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 8.8e-12 74.7 108 45.4
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 8.8e-12 74.7 134 38.1
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 1.5e-11 73.9 109 41.3
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 3.3e-11 72.8 133 39.1
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 3.3e-11 72.8 140 35.0
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 4.3e-11 72.4 227 33.5
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 5.7e-11 72.0 214 31.3
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 9.7e-11 71.2 213 32.9
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 1.7e-10 70.5 221 27.6
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 2.8e-10 69.7 224 31.2
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 3.7e-10 69.3 109 40.4
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 6.3e-10 68.6 186 33.9
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 6.3e-10 68.6 109 38.5
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 8.2e-10 68.2 145 35.9
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 8.2e-10 68.2 139 34.5
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 1.1e-09 67.8 144 34.7
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.1e-09 67.8 87 47.1
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 1.4e-09 67.4 164 33.5
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.4e-09 67.4 210 29.0
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.8e-09 67.0 139 34.5
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 2.4e-09 66.6 224 29.5
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 2.4e-09 66.6 109 38.5
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.4e-09 66.6 87 46.0
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.1e-09 66.2 87 44.8
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 4.1e-09 65.9 137 34.3
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 4.1e-09 65.9 160 36.2
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 4.1e-09 65.9 92 41.3
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 5.3e-09 65.5 178 28.1
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 5.3e-09 65.5 207 30.4
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 5.3e-09 65.5 103 39.8
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 9.1e-09 64.7 219 28.8
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 9.1e-09 64.7 140 35.7
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 9.1e-09 64.7 185 30.3
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-08 64.3 87 44.8
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-08 64.3 87 44.8
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-08 64.3 87 44.8
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-08 64.3 87 44.8
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.2e-08 64.3 212 30.7
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.2e-08 64.3 122 36.9
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 2.6e-08 63.2 144 35.4
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 3.4e-08 62.8 89 46.1
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 3.4e-08 62.8 89 43.8
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 4.5e-08 62.4 95 43.2
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.5e-08 62.4 87 43.7
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 5.9e-08 62.0 207 31.9
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 5.9e-08 62.0 93 41.9
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 7.7e-08 61.6 94 40.4
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 7.7e-08 61.6 137 32.1
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 7.7e-08 61.6 171 33.9
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.0e-07 61.2 144 34.7
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.3e-07 60.8 101 36.6
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 1.3e-07 60.8 89 44.9
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.7e-07 60.5 204 30.4
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 1.7e-07 60.5 210 31.0
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 2.2e-07 60.1 136 33.8
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 2.2e-07 60.1 110 37.3
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 3.8e-07 59.3 136 35.3
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 5.0e-07 58.9 81 46.9
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 8.5e-07 58.2 210 30.0
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 8.5e-07 58.2 210 31.0
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 8.5e-07 58.2 134 32.1
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 8.5e-07 58.2 139 34.5
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 1.4e-06 57.4 141 37.6
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 1.4e-06 57.4 89 42.7
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 1.9e-06 57.0 161 29.2
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 4.2e-06 55.8 147 32.0
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 7.2e-06 55.1 154 32.5


User provided reference genes

Program Settings