Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17570 Sequoiadendron giganteum HOM05D002889 ORTHO05D003366 2.0e-133 479.2 249 100.0
ATR0787G124 Amborella trichopoda HOM05D002889 ORTHO05D003366 6.8e-86 321.2 194 85.1
Aqoxy5G00053 Aquilegia oxysepala HOM05D002889 ORTHO05D003366 8.3e-84 314.3 199 81.4
Nn1g03087 Nelumbo nucifera HOM05D002889 ORTHO05D003366 2.4e-83 312.8 191 82.7
Nn3g19858 Nelumbo nucifera HOM05D002889 ORTHO05D003366 9.2e-83 310.8 192 81.2
Dinv43034 Davidia involucrata HOM05D002889 ORTHO05D003366 2.1e-82 309.7 245 69.0
CiPaw.03G153400 Carya illinoinensis HOM05D002889 ORTHO05D003366 3.5e-82 308.9 192 81.2
TAR362G1318 Trochodendron aralioides HOM05D002889 ORTHO05D003366 3.5e-82 308.9 194 80.4
Migut.N02247 Erythranthe guttata HOM05D002889 ORTHO05D003366 7.8e-82 307.8 243 69.1
TWI14G1217 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 1.7e-81 306.6 194 79.9
Thecc.01G236600 Theobroma cacao HOM05D002889 ORTHO05D003366 3.0e-81 305.8 245 66.9
MBI10_g16806_MAGBIO Magnolia biondii HOM05D002889 ORTHO05D003366 6.6e-81 304.7 194 82.0
Solyc06g008040.3 Solanum lycopersicum HOM05D002889 ORTHO05D003366 6.6e-81 304.7 196 78.1
GSVIVG01028494001 Vitis vinifera HOM05D002889 ORTHO05D003366 1.1e-80 303.9 191 79.1
Dinv19240 Davidia involucrata HOM05D002889 ORTHO05D003366 1.5e-80 303.5 245 68.6
Duzib133G1137 Durio zibethinus HOM05D002889 ORTHO05D003366 1.5e-80 303.5 198 77.3
Manes.12G044400 Manihot esculenta HOM05D002889 ORTHO05D003366 1.5e-80 303.5 194 79.4
QL09p043970 Quercus lobata HOM05D002889 ORTHO05D003366 1.5e-80 303.5 192 80.2
DCAR_012623 Daucus carota HOM05D002889 ORTHO05D003366 1.9e-80 303.1 192 77.1
Ciclev10018498m.g Citrus clementina HOM05D002889 ORTHO05D003366 2.5e-80 302.8 191 80.1
Prupe.8G209400 Prunus persica HOM05D002889 ORTHO05D003366 2.5e-80 302.8 192 78.6
Psat3g050120 Pisum sativum HOM05D002889 ORTHO05D003366 3.3e-80 302.4 192 80.2
Atru.chr5.1927 Acer truncatum HOM05D002889 ORTHO05D003366 4.3e-80 302.0 191 79.1
Actinidia09497 Actinidia chinensis HOM05D002889 ORTHO05D003366 4.3e-80 302.0 194 77.8
arahy.Tifrunner.gnm1.ann1.EIAU9G Arachis hypogaea HOM05D002889 ORTHO05D003366 4.3e-80 302.0 192 78.6
Glyma.13G130000 Glycine max HOM05D002889 ORTHO05D003366 4.3e-80 302.0 194 78.4
Gohir.D08G210800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 4.3e-80 302.0 244 66.4
Gorai.004G223500 Gossypium raimondii HOM05D002889 ORTHO05D003366 4.3e-80 302.0 244 66.4
Potri.002G253200 Populus trichocarpa HOM05D002889 ORTHO05D003366 4.3e-80 302.0 194 77.8
Sabra02G0192400 Salix brachista HOM05D002889 ORTHO05D003366 4.3e-80 302.0 194 77.8
Sopen06g002880 Solanum pennellii HOM05D002889 ORTHO05D003366 4.3e-80 302.0 196 77.0
MD10G1170900 Malus domestica HOM05D002889 ORTHO05D003366 5.6e-80 301.6 192 77.6
TPR.G7556 Trifolium pratense HOM05D002889 ORTHO05D003366 5.6e-80 301.6 192 80.2
Eucgr.K03590 Eucalyptus grandis HOM05D002889 ORTHO05D003366 7.3e-80 301.2 191 80.1
TAR365G1138 Trochodendron aralioides HOM05D002889 ORTHO05D003366 7.3e-80 301.2 194 78.9
HPP92_027294 Vanilla planifolia HOM05D002889 ORTHO05D003366 7.3e-80 301.2 194 78.9
TWI23G0798 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 9.5e-80 300.8 194 77.8
Gohir.A08G192800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 1.2e-79 300.4 244 66.0
AagrBONN_evm.TU.Sc2ySwM_228.3600 Anthoceros agrestis HOM05D002889 ORTHO05D003366 2.8e-79 299.3 192 79.2
FAN15G1177 Fragaria x ananassa HOM05D002889 ORTHO05D003366 2.8e-79 299.3 192 77.6
Cc01_g17450 Coffea canephora HOM05D002889 ORTHO05D003366 3.6e-79 298.9 194 77.8
PGR044G2403 Punica granatum HOM05D002889 ORTHO05D003366 3.6e-79 298.9 191 79.1
Lalb_Chr25g0289711 Lupinus albus HOM05D002889 ORTHO05D003366 4.7e-79 298.5 192 78.6
Nitab4.5_0000813g0100 Nicotiana tabacum HOM05D002889 ORTHO05D003366 4.7e-79 298.5 191 78.5
Peaxi162Scf00499g00610 Petunia axillaris HOM05D002889 ORTHO05D003366 4.7e-79 298.5 194 76.3
MSTRG.12505 Avicennia marina HOM05D002889 ORTHO05D003366 6.2e-79 298.1 192 77.6
FAN24G0698 Fragaria x ananassa HOM05D002889 ORTHO05D003366 6.2e-79 298.1 192 77.1
Nitab4.5_0003180g0050 Nicotiana tabacum HOM05D002889 ORTHO05D003366 6.2e-79 298.1 196 77.0
RcHm_v2.0_Chr6g0285551 Rosa chinensis HOM05D002889 ORTHO05D003366 6.2e-79 298.1 192 77.1
FAN27G1075 Fragaria x ananassa HOM05D002889 ORTHO05D003366 8.1e-79 297.7 192 77.1
Lj1g0020070 Lotus japonicus HOM05D002889 ORTHO05D003366 8.1e-79 297.7 190 78.9
CiPaw.04G108600 Carya illinoinensis HOM05D002889 ORTHO05D003366 1.1e-78 297.4 192 77.6
Ca_08769_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 1.1e-78 297.4 192 79.2
Haze_24745 Corylus avellana HOM05D002889 ORTHO05D003366 1.1e-78 297.4 194 77.3
CAN.G941.45 Capsicum annuum HOM05D002889 ORTHO05D003366 1.4e-78 297.0 194 76.3
Eucgr.H00823 Eucalyptus grandis HOM05D002889 ORTHO05D003366 1.4e-78 297.0 194 77.3
Nitab4.5_0002727g0040 Nicotiana tabacum HOM05D002889 ORTHO05D003366 1.4e-78 297.0 196 76.5
CSS0022688 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D003366 1.8e-78 296.6 245 65.7
Lj5g0008167 Lotus japonicus HOM05D002889 ORTHO05D003366 1.8e-78 296.6 192 78.1
Medtr7g099480 Medicago truncatula HOM05D002889 ORTHO05D003366 1.8e-78 296.6 192 79.2
VMungo0720G0228 Vigna mungo HOM05D002889 ORTHO05D003366 1.8e-78 296.6 192 79.2
Duzib138G1300 Durio zibethinus HOM05D002889 ORTHO05D003366 2.4e-78 296.2 252 63.9
Manes.13G042800 Manihot esculenta HOM05D002889 ORTHO05D003366 2.4e-78 296.2 194 76.3
Mapoly0066s0036 Marchantia polymorpha HOM05D002889 ORTHO05D003366 2.4e-78 296.2 190 79.5
Nitab4.5_0004779g0010 Nicotiana tabacum HOM05D002889 ORTHO05D003366 2.4e-78 296.2 197 76.1
arahy.Tifrunner.gnm1.ann1.73DRY2 Arachis hypogaea HOM05D002889 ORTHO05D003366 3.1e-78 295.8 192 77.6
arahy.Tifrunner.gnm1.ann1.CB4TML Arachis hypogaea HOM05D002889 ORTHO05D003366 4.0e-78 295.4 192 77.1
Carub.0003s3449 Capsella rubella HOM05D002889 ORTHO05D003366 4.0e-78 295.4 191 78.0
Peaxi162Scf00052g02011 Petunia axillaris HOM05D002889 ORTHO05D003366 4.0e-78 295.4 196 76.5
Aa31LG8G17120 Aethionema arabicum HOM05D002889 ORTHO05D003366 5.2e-78 295.0 191 77.0
Glyma.03G170000 Glycine max HOM05D002889 ORTHO05D003366 6.8e-78 294.7 190 78.4
Rhsim13G0041900 Rhododendron simsii HOM05D002889 ORTHO05D003366 6.8e-78 294.7 194 76.8
Phvul.001G168400 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 8.9e-78 294.3 190 78.4
Solyc09g063030.4 Solanum lycopersicum HOM05D002889 ORTHO05D003366 8.9e-78 294.3 196 77.0
Sopen09g025200 Solanum pennellii HOM05D002889 ORTHO05D003366 8.9e-78 294.3 196 77.0
unitig_746.g26747 Utricularia gibba HOM05D002889 ORTHO05D003366 8.9e-78 294.3 192 78.1
VMungo1383G1051 Vigna mungo HOM05D002889 ORTHO05D003366 1.2e-77 293.9 190 78.4
THA.LOC104820061 Tarenaya hassleriana HOM05D002889 ORTHO05D003366 2.0e-77 293.1 191 77.5
CAN.G154.1 Capsicum annuum HOM05D002889 ORTHO05D003366 2.6e-77 292.7 196 76.0
Glyma.10G042600 Glycine max HOM05D002889 ORTHO05D003366 3.4e-77 292.4 194 76.8
Glyma.19G171200 Glycine max HOM05D002889 ORTHO05D003366 3.4e-77 292.4 190 77.9
DCAR_018539 Daucus carota HOM05D002889 ORTHO05D003366 4.4e-77 292.0 201 74.1
TWI59G1284 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 4.4e-77 292.0 198 77.3
SalBow6G0687 Salvia bowleyana HOM05D002889 ORTHO05D003366 5.8e-77 291.6 192 77.1
Sed0001453 Sechium edule HOM05D002889 ORTHO05D003366 5.8e-77 291.6 192 75.0
unitig_899.g15235 Utricularia gibba HOM05D002889 ORTHO05D003366 5.8e-77 291.6 191 75.9
AL3G47890 Arabidopsis lyrata HOM05D002889 ORTHO05D003366 7.6e-77 291.2 191 77.0
Actinidia37572 Actinidia chinensis HOM05D002889 ORTHO05D003366 1.7e-76 290.0 189 77.8
A09p12740 Brassica napus HOM05D002889 ORTHO05D003366 1.7e-76 290.0 191 77.0
BraA09t36918Z Brassica rapa HOM05D002889 ORTHO05D003366 1.7e-76 290.0 191 77.0
Psat6g064880 Pisum sativum HOM05D002889 ORTHO05D003366 1.7e-76 290.0 190 76.3
Sp3g33430 Schrenkiella parvula HOM05D002889 ORTHO05D003366 1.7e-76 290.0 191 76.4
CARHR110690 Cardamine hirsuta HOM05D002889 ORTHO05D003366 2.9e-76 289.3 191 75.9
HanXRQChr13g0409041 Helianthus annuus HOM05D002889 ORTHO05D003366 2.9e-76 289.3 188 76.6
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 2.9e-76 289.3 245 63.7
AUR62025387 Chenopodium quinoa HOM05D002889 ORTHO05D003366 4.9e-76 288.5 192 75.0
Lalb_Chr20g0113361 Lupinus albus HOM05D002889 ORTHO05D003366 4.9e-76 288.5 193 76.7
TPR.G35800 Trifolium pratense HOM05D002889 ORTHO05D003366 4.9e-76 288.5 190 75.8
AT2G20190 Arabidopsis thaliana HOM05D002889 ORTHO05D003366 6.4e-76 288.1 191 75.9
Thhalv10001879m.g Eutrema salsugineum HOM05D002889 ORTHO05D003366 6.4e-76 288.1 191 75.9
Medtr1g069165 Medicago truncatula HOM05D002889 ORTHO05D003366 6.4e-76 288.1 190 76.3
BcaNung04093 Brassica carinata HOM05D002889 ORTHO05D003366 8.4e-76 287.7 191 76.4
Lalb_Chr02g0152941 Lupinus albus HOM05D002889 ORTHO05D003366 8.4e-76 287.7 192 75.0
CsaV3_7G025450 Cucumis sativus L. HOM05D002889 ORTHO05D003366 1.1e-75 287.3 192 74.0
Phvul.007G156100 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 1.1e-75 287.3 196 75.0
BcaB03g16811 Brassica carinata HOM05D002889 ORTHO05D003366 1.4e-75 287.0 189 76.7
A07p00540 Brassica napus HOM05D002889 ORTHO05D003366 1.4e-75 287.0 189 76.7
BraA07t27848Z Brassica rapa HOM05D002889 ORTHO05D003366 1.4e-75 287.0 189 76.7
BcaC06g36696 Brassica carinata HOM05D002889 ORTHO05D003366 1.9e-75 286.6 189 76.7
BolC7t40536H Brassica oleracea HOM05D002889 ORTHO05D003366 1.9e-75 286.6 189 76.7
HanXRQChr10g0287251 Helianthus annuus HOM05D002889 ORTHO05D003366 1.9e-75 286.6 188 76.6
MELO3C024150.2 Cucumis melo HOM05D002889 ORTHO05D003366 2.4e-75 286.2 192 74.0
Gohir.A07G202300 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.4e-75 286.2 192 75.0
Gohir.D07G208500 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.2e-75 285.8 192 75.0
Gorai.001G183300 Gossypium raimondii HOM05D002889 ORTHO05D003366 3.2e-75 285.8 185 77.3
C07p00990 Brassica napus HOM05D002889 ORTHO05D003366 4.1e-75 285.4 189 76.2
Gorai.001G235400 Gossypium raimondii HOM05D002889 ORTHO05D003366 4.1e-75 285.4 192 74.5
Sed0016475 Sechium edule HOM05D002889 ORTHO05D003366 4.1e-75 285.4 194 73.2
Cpa.g.sc8.204 Carica papaya HOM05D002889 ORTHO05D003366 5.4e-75 285.0 185 76.2
C09p15080 Brassica napus HOM05D002889 ORTHO05D003366 7.1e-75 284.6 191 75.4
BolC9t54414H Brassica oleracea HOM05D002889 ORTHO05D003366 7.1e-75 284.6 191 75.4
Gohir.A07G154000 Gossypium hirsutum HOM05D002889 ORTHO05D003366 9.2e-75 284.3 186 76.3
Ca_09624_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 1.6e-74 283.5 190 75.8
MSTRG.17535 Avicennia marina HOM05D002889 ORTHO05D003366 2.7e-74 282.7 192 72.9
Cfa002518 Carpinus fangiana HOM05D002889 ORTHO05D003366 6.0e-74 281.6 194 75.3
PSO170G4103 Papaver somniferum HOM05D002889 ORTHO05D003366 6.0e-74 281.6 264 61.0
PSO764G0331 Papaver somniferum HOM05D002889 ORTHO05D003366 7.8e-74 281.2 264 62.9
Lsat_1_v5_gn_8_90261 Lactuca sativa HOM05D002889 ORTHO05D003366 2.3e-73 279.6 188 75.0
EL10Ac7g17762 Beta vulgaris HOM05D002889 ORTHO05D003366 3.0e-73 279.3 228 64.5
CDE02G1653 Ceratophyllum demersum HOM05D002889 ORTHO05D002017 3.0e-73 279.3 190 76.8
Zm00001eb077900 Zea mays HOM05D002889 ORTHO05D003366 3.0e-73 279.3 191 73.8
vmacro14772 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 6.6e-73 278.1 184 75.5
SMO271G0072 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 4.3e-72 275.4 192 72.9
vmacro02730 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 2.8e-71 272.7 221 66.1
SGA_v2.0_scaffold42G16158 Striga asiatica HOM05D002889 ORTHO05D003366 4.4e-69 265.4 249 59.0
SMO358G0024 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 5.8e-69 265.0 185 75.1
ECA236G1707 Erigeron canadensis HOM05D002889 ORTHO05D003366 9.9e-69 264.2 171 77.8
Pp3c24_11460 Physcomitrium patens HOM05D002889 ORTHO05D003366 6.4e-68 261.5 192 70.8
Thecc.04G215400 Theobroma cacao HOM05D002889 ORTHO05D003366 6.4e-68 261.5 190 66.8
Rhsim01G0258400 Rhododendron simsii HOM05D002889 ORTHO05D003366 7.1e-67 258.1 219 63.5
Duzib212G0822 Durio zibethinus HOM05D002889 ORTHO05D003366 2.7e-66 256.1 190 64.7
Hund05497 Selenicereus undatus HOM05D002889 ORTHO05D003366 2.7e-66 256.1 171 74.9
arahy.Tifrunner.gnm1.ann1.PFSA3S Arachis hypogaea HOM05D002889 ORTHO05D003366 3.5e-66 255.8 192 70.8
Pp3c8_18290 Physcomitrium patens HOM05D002889 ORTHO05D003366 6.0e-66 255.0 189 69.8
Gohir.D09G053074 Gossypium hirsutum HOM05D002889 ORTHO05D003366 7.8e-66 254.6 190 65.8
SGA_v2.0_scaffold3G01589 Striga asiatica HOM05D002889 ORTHO05D003366 7.8e-66 254.6 192 68.8
Gorai.006G054600 Gossypium raimondii HOM05D002889 ORTHO05D003366 2.3e-65 253.1 203 62.1
PGR083G0457 Punica granatum HOM05D002889 ORTHO05D003366 2.3e-65 253.1 189 68.3
Gohir.A09G053900 Gossypium hirsutum HOM05D002889 ORTHO05D003366 1.1e-64 250.8 203 61.6
Oeu015915.1 Olea europaea HOM05D002889 ORTHO05D003366 1.1e-64 250.8 191 70.2
Hund18347 Selenicereus undatus HOM05D002889 ORTHO05D003366 1.9e-64 250.0 276 52.2
Ah.08g213900 Amaranthus hybridus HOM05D002889 ORTHO05D003366 6.2e-63 245.0 192 66.1
BcaC04g22811 Brassica carinata HOM05D002889 ORTHO05D003366 1.8e-62 243.4 191 68.6
CDE08G0296 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 4.9e-60 235.3 184 69.0
AagrBONN_evm.TU.Sc2ySwM_344.3269 Anthoceros agrestis HOM05D002889 ORTHO05D003366 2.1e-58 229.9 189 65.1
Lj2C1137G6 Lonicera japonica HOM05D002889 ORTHO05D003366 5.6e-56 221.9 140 78.6
ClCG09G009410 Citrullus lanatus HOM05D002889 ORTHO05D003366 1.8e-54 216.9 192 59.4
AUR62008857 Chenopodium quinoa HOM05D002889 ORTHO05D003366 6.4e-52 208.4 146 71.2
Zm00001eb426220 Zea mays HOM05D002889 ORTHO05D003366 1.1e-51 207.6 175 63.4
Lsat_1_v5_gn_9_11241 Lactuca sativa HOM05D002889 ORTHO05D003366 9.3e-51 204.5 140 71.4
Os02g0816300 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 4.9e-44 182.2 187 52.4
COL.COLO4_05728 Corchorus olitorius HOM05D002889 ORTHO05D003366 2.1e-42 176.8 148 58.8
Zm00001eb258850 Zea mays HOM05D002889 ORTHO05D003366 4.1e-38 162.5 213 44.6
Gohir.D07G160200 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.4e-37 159.5 106 73.6
Oeu017344.1 Olea europaea HOM05D002889 ORTHO05D003366 3.8e-36 156.0 108 72.2
MD05G1182800 Malus domestica HOM05D002889 ORTHO05D003366 8.5e-36 154.8 108 70.4
Lj1A81T56 Lonicera japonica HOM05D002889 ORTHO05D003366 1.0e-33 147.9 89 83.1
Lj1A81T55 Lonicera japonica HOM05D002889 ORTHO05D003366 1.1e-32 144.4 124 60.5
EL10Ac7g17764 Beta vulgaris HOM05D002889 ORTHO05D003366 3.1e-30 136.3 82 82.9
CBR_g12856 Chara braunii HOM05D002889 ORTHO05D003366 1.2e-29 134.4 156 44.2
CDE09G0034 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 1.4e-27 127.5 78 80.8
Gohir.D07G160250 Gossypium hirsutum HOM05D002889 ORTHO05D003366 5.5e-27 125.6 85 71.8
EL10Ac7g17763 Beta vulgaris HOM05D002889 ORTHO05D003366 7.9e-26 121.7 159 45.3
EL10Ac7g17767 Beta vulgaris HOM05D002889 ORTHO05D003366 1.1e-24 117.9 122 52.5
FvH4_2g19850 Fragaria vesca HOM05D002889 ORTHO05D003366 1.1e-24 117.9 86 65.1
CBR_g8665 Chara braunii HOM05D002889 ORTHO05D003366 4.4e-24 115.9 117 49.6
EL10Ac7g17766 Beta vulgaris HOM05D002889 ORTHO05D003366 2.4e-22 110.2 110 57.3
EL10Ac7g17765 Beta vulgaris HOM05D002889 ORTHO05D003366 1.5e-21 107.5 115 54.8
RcHm_v2.0_Chr1g0330771 Rosa chinensis HOM05D002889 ORTHO05D003366 1.5e-21 107.5 93 54.8
PRCOL_00006275 Prasinoderma coloniale HOM05D002889 ORTHO05D003366 1.0e-20 104.8 184 36.4
Sc05g0002470 Simmondsia chinensis HOM05D002889 ORTHO05D003366 4.1e-14 82.8 63 66.7
BcaC05g29830 Brassica carinata HOM05D002889 ORTHO05D012790 7.7e-13 78.6 59 66.1
C05p60400 Brassica napus HOM05D010738 ORTHO05D012790 2.2e-12 77.0 43 83.7
BolC5t34686H Brassica oleracea HOM05D010738 ORTHO05D012790 2.2e-12 77.0 43 83.7
MCO10G388 Micromonas commoda HOM05D002889 ORTHO05D003366 1.5e-11 74.3 78 50.0
arahy.Tifrunner.gnm1.ann1.46R0UG Arachis hypogaea HOM05D002853 ORTHO05D003030 7.2e-11 72.0 78 55.1


User provided reference genes

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