Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17421 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.4e-78 296.2 152 100.0
SEGI_36372 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.0e-17 91.3 72 62.5
SEGI_23703 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.0e-16 89.7 94 51.1
SEGI_20981 Sequoiadendron giganteum HOM05D018057 ORTHO05D012767 1.6e-13 80.1 53 66.0
SEGI_35333 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.1e-13 79.7 55 61.8
SEGI_37292 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.6e-13 79.0 58 55.2
SEGI_06590 Sequoiadendron giganteum HOM05D000506 ORTHO05D000369 8.0e-13 77.8 133 37.6
SEGI_23315 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.4e-12 77.0 86 43.0
SEGI_32077 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.2e-12 75.1 56 55.4
SEGI_05382 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 6.8e-12 74.7 54 57.4
SEGI_15464 Sequoiadendron giganteum HOM05D000630 ORTHO05D001565 6.8e-12 74.7 71 47.9
SEGI_18538 Sequoiadendron giganteum HOM05D014930 ORTHO05D001565 6.8e-12 74.7 72 51.4
SEGI_24575 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 6.8e-12 74.7 91 42.9
SEGI_26453 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 8.9e-12 74.3 56 55.4
SEGI_31336 Sequoiadendron giganteum HOM05D000170 ORTHO05D001565 2.6e-11 72.8 58 53.4
SEGI_04927 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 3.4e-11 72.4 73 45.2
SEGI_01716 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.4e-11 72.0 53 56.6
SEGI_07873 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 9.8e-11 70.9 53 54.7
SEGI_21554 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 9.8e-11 70.9 53 56.6
SEGI_21983 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.3e-10 70.5 53 58.5
SEGI_17064 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.9e-10 69.3 54 53.7
SEGI_33261 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.9e-10 69.3 55 52.7
SEGI_39428 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.9e-10 68.6 51 56.9
SEGI_10939 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 6.4e-10 68.2 55 50.9
SEGI_13780 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 8.3e-10 67.8 58 48.3
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 8.3e-10 67.8 54 51.9
SEGI_21472 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.1e-09 67.4 52 59.6
SEGI_05245 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.4e-09 66.2 54 51.9
SEGI_25441 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.2e-09 65.9 58 46.6
SEGI_08668 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.0e-09 64.7 59 45.8
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 1.6e-08 63.5 58 44.8
SEGI_02900 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.0e-08 63.2 54 50.0
SEGI_11295 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 2.7e-08 62.8 53 50.9
SEGI_03610 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.5e-08 62.4 52 55.8
SEGI_27577 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.5e-08 62.4 49 59.2
SEGI_02496 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.6e-08 62.0 58 48.3
SEGI_21679 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.6e-08 62.0 52 53.8
TPR.G11388 Trifolium pratense HOM05D000176 ORTHO05D000106 5.9e-08 61.6 67 44.8
SEGI_15510 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.8e-08 61.2 49 51.0
SEGI_22170 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.0e-07 60.8 50 54.0
SEGI_29824 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.7e-07 60.1 53 47.2
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 1.7e-07 60.1 52 44.2
SEGI_06357 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.3e-07 59.7 103 34.0
SEGI_32693 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.3e-07 59.7 48 54.2
SEGI_01327 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.0e-07 59.3 52 53.8
SEGI_09660 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.0e-07 59.3 50 50.0
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 3.9e-07 58.9 54 50.0
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 3.9e-07 58.9 54 50.0
Ca_26998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.0e-07 58.5 82 40.2
SEGI_17433 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.0e-07 58.5 50 50.0
SEGI_22168 Sequoiadendron giganteum HOM05D002752 ORTHO05D001565 5.0e-07 58.5 45 53.3
SEGI_23917 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.0e-07 58.5 51 47.1
SEGI_36809 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.0e-07 58.5 50 50.0
SEGI_33748 Sequoiadendron giganteum HOM05D001782 ORTHO05D000022 6.6e-07 58.2 51 54.9
CSS0046365 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 8.6e-07 57.8 71 43.7
SEGI_17201 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 8.6e-07 57.8 50 48.0
SEGI_38829 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.1e-06 57.4 50 48.0
SEGI_39108 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.1e-06 57.4 41 56.1
FvH4_3g28611 Fragaria vesca HOM05D000176 ORTHO05D000106 1.5e-06 57.0 70 41.4
RcHm_v2.0_Chr5g0052481 Rosa chinensis HOM05D000176 ORTHO05D000106 1.5e-06 57.0 70 41.4
SEGI_07521 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.5e-06 57.0 54 48.1
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 1.5e-06 57.0 53 43.4
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-06 56.6 54 44.4
SEGI_09094 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.9e-06 56.6 46 50.0
SEGI_22998 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.9e-06 56.6 46 52.2
SEGI_25510 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.9e-06 56.6 63 44.4
SEGI_30264 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 1.9e-06 56.6 46 52.2
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-06 56.2 52 50.0
QL12p023375 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-06 56.2 54 42.6
SEGI_07902 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.5e-06 56.2 50 48.0
SEGI_15264 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.5e-06 56.2 51 45.1
SEGI_19296 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.5e-06 56.2 50 48.0
SEGI_25458 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.5e-06 56.2 50 48.0
SEGI_26519 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.5e-06 56.2 125 32.8
SEGI_37565 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.5e-06 56.2 54 46.3
Ca_12413_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.3e-06 55.8 44 54.5
QL02p053683 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-06 55.8 54 44.4
QL04p043590 Quercus lobata HOM05D001978 ORTHO05D003036 3.3e-06 55.8 54 44.4
QL05p087728 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-06 55.8 54 44.4
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-06 55.8 54 44.4
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 3.3e-06 55.8 54 44.4
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-06 55.8 54 42.6
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-06 55.8 54 44.4
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-06 55.8 54 44.4
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 3.3e-06 55.8 54 44.4
SEGI_03936 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.3e-06 55.8 50 46.0
SEGI_22329 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.3e-06 55.8 49 46.9
SEGI_23499 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.3e-06 55.8 63 42.9
SEGI_30606 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 3.3e-06 55.8 69 34.8
TPR.G39416 Trifolium pratense HOM05D000176 ORTHO05D001565 3.3e-06 55.8 49 44.9
Prupe.4G252400 Prunus persica HOM05D000176 ORTHO05D000106 4.3e-06 55.5 70 40.0
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 4.3e-06 55.5 54 42.6
QL05p078397 Quercus lobata HOM05D000070 ORTHO05D000106 4.3e-06 55.5 54 42.6
Rhsim05G0077700 Rhododendron simsii HOM05D000176 ORTHO05D000106 4.3e-06 55.5 116 31.9
SEGI_06580 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 51 47.1
SEGI_15491 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 50 44.0
SEGI_23677 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 54 44.4
SEGI_24315 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 104 32.7
SEGI_32873 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 47 51.1
SEGI_33098 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 51 47.1
SEGI_36764 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.3e-06 55.5 54 46.3
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 5.6e-06 55.1 48 52.1
Lalb_Chr15g0080531 Lupinus albus HOM05D000176 ORTHO05D000106 5.6e-06 55.1 72 41.7
SEGI_15584 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.6e-06 55.1 40 55.0
SEGI_18024 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.6e-06 55.1 73 38.4
SEGI_24607 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.6e-06 55.1 45 51.1
SEGI_32405 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.6e-06 55.1 100 32.0
SEGI_36981 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 5.6e-06 55.1 51 43.1
Ah.07g199040 Amaranthus hybridus HOM05D000176 ORTHO05D000106 7.3e-06 54.7 50 50.0
CSS0028598 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 7.3e-06 54.7 73 41.1
Ca_07479_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.3e-06 54.7 45 48.9
SEGI_08201 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 54 44.4
SEGI_11878 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 50 46.0
SEGI_17042 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 50 46.0
SEGI_18557 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 43 55.8
SEGI_29971 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 50 46.0
SEGI_30031 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 62 43.5
SEGI_38969 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 7.3e-06 54.7 120 30.8
TPR.G28073 Trifolium pratense HOM05D000176 ORTHO05D000106 7.3e-06 54.7 66 40.9
TWI56G0332 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.3e-06 54.7 51 49.0
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 7.3e-06 54.7 53 43.4
Ca_04467_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.5e-06 54.3 44 50.0
Os02g0592600 Oryza sativa ssp. japonica HOM05D000176 ORTHO05D000106 9.5e-06 54.3 52 46.2
QL02p000127 Quercus lobata HOM05D003289 ORTHO05D004594 9.5e-06 54.3 54 42.6
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 9.5e-06 54.3 56 41.1
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 9.5e-06 54.3 66 42.4
Rhsim01G0238100 Rhododendron simsii HOM05D000176 ORTHO05D000106 9.5e-06 54.3 53 49.1
SEGI_17506 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 9.5e-06 54.3 51 45.1
SEGI_21766 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 9.5e-06 54.3 46 52.2
SEGI_23343 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 9.5e-06 54.3 50 46.0


User provided reference genes

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