Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17390 Sequoiadendron giganteum HOM05D000343 ORTHO05D013318 1.3e-70 269.6 137 100.0
SEGI_31084 Sequoiadendron giganteum HOM05D000343 ORTHO05D003187 5.7e-10 68.2 117 41.0
Pp3c2_8660 Physcomitrium patens HOM05D000343 ORTHO05D003187 1.3e-09 67.0 54 64.8
SEGI_23565 Sequoiadendron giganteum HOM05D000343 ORTHO05D003187 1.1e-08 63.9 56 62.5
AagrBONN_evm.TU.Sc2ySwM_228.4544 Anthoceros agrestis HOM05D000343 ORTHO05D003187 1.8e-08 63.2 66 53.0
SEGI_18306 Sequoiadendron giganteum HOM05D000343 ORTHO05D013318 1.8e-08 63.2 66 54.5
SEGI_12445 Sequoiadendron giganteum HOM05D000343 ORTHO05D003187 7.0e-08 61.2 70 50.0
Pp3c6_24750 Physcomitrium patens HOM05D000343 ORTHO05D003187 1.2e-07 60.5 53 60.4
Aqoxy7G02748 Aquilegia oxysepala HOM05D000343 ORTHO05D003187 2.7e-07 59.3 52 53.8
MBI04_g28022_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D003187 2.7e-07 59.3 71 50.7
MBI04_g37011_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D003187 2.7e-07 59.3 71 50.7
AUR62007721 Chenopodium quinoa HOM05D000343 ORTHO05D003187 4.5e-07 58.5 60 53.3
Lj6g0012293 Lotus japonicus HOM05D000343 ORTHO05D003187 4.5e-07 58.5 60 51.7
Medtr2g036380 Medicago truncatula HOM05D000343 ORTHO05D003187 4.5e-07 58.5 59 52.5
RhsimUnG0198000 Rhododendron simsii HOM05D000343 ORTHO05D003187 4.5e-07 58.5 53 56.6
AUR62013421 Chenopodium quinoa HOM05D000343 ORTHO05D003187 5.9e-07 58.2 57 54.4
Glyma.09G055600 Glycine max HOM05D000343 ORTHO05D003187 5.9e-07 58.2 60 51.7
SEGI_30397 Sequoiadendron giganteum HOM05D000343 ORTHO05D013318 5.9e-07 58.2 54 59.3
Sc14g0001430 Simmondsia chinensis HOM05D000343 ORTHO05D003187 5.9e-07 58.2 59 54.2
SGA_v2.0_scaffold21G09641 Striga asiatica HOM05D000343 ORTHO05D003187 5.9e-07 58.2 52 59.6
Ah.05g169160 Amaranthus hybridus HOM05D001702 ORTHO05D003187 7.7e-07 57.8 60 51.7
CBR_g29490 Chara braunii HOM05D000343 ORTHO05D003187 7.7e-07 57.8 54 53.7
Ca_02232_v3 Cicer arietinum L. HOM05D000343 ORTHO05D003187 7.7e-07 57.8 58 53.4
Dinv25418 Davidia involucrata HOM05D000343 ORTHO05D003187 7.7e-07 57.8 59 52.5
Phvul.009G240000 Phaseolus vulgaris HOM05D000343 ORTHO05D003187 7.7e-07 57.8 60 51.7
Potri.006G076900 Populus trichocarpa HOM05D000343 ORTHO05D003187 7.7e-07 57.8 58 50.0
TPR.G32645 Trifolium pratense HOM05D000343 ORTHO05D003187 7.7e-07 57.8 59 50.8
vmacro20832 Vaccinium macrocarpon HOM05D000343 ORTHO05D003187 7.7e-07 57.8 53 56.6
Ca_12387_v3 Cicer arietinum L. HOM05D000343 ORTHO05D003187 1.0e-06 57.4 58 51.7
Migut.L01894 Erythranthe guttata HOM05D000343 ORTHO05D003187 1.0e-06 57.4 55 54.5
Sed0020208 Sechium edule HOM05D000343 ORTHO05D003187 1.0e-06 57.4 58 50.0
EL10Ac1g01341 Beta vulgaris HOM05D000343 ORTHO05D003187 1.3e-06 57.0 60 51.7
ECA234G2850 Erigeron canadensis HOM05D000343 ORTHO05D003187 1.3e-06 57.0 58 55.2
Lalb_Chr18g0052291 Lupinus albus HOM05D000343 ORTHO05D003187 1.3e-06 57.0 60 51.7
Os06g0700700 Oryza sativa ssp. japonica HOM05D000343 ORTHO05D003187 1.3e-06 57.0 63 52.4
Sabra06G0058200 Salix brachista HOM05D000343 ORTHO05D003187 1.3e-06 57.0 58 50.0
AUR62033256 Chenopodium quinoa HOM05D000343 ORTHO05D003187 1.7e-06 56.6 58 53.4
Ciclev10003938m.g Citrus clementina HOM05D000343 ORTHO05D003187 1.7e-06 56.6 52 57.7
ECA240G3161 Erigeron canadensis HOM05D000343 ORTHO05D003187 1.7e-06 56.6 58 55.2
HanXRQChr10g0309191 Helianthus annuus HOM05D000343 ORTHO05D003187 1.7e-06 56.6 58 55.2
PRCOL_00006129 Prasinoderma coloniale HOM05D000343 ORTHO05D003187 1.7e-06 56.6 65 47.7
Actinidia27077 Actinidia chinensis HOM05D000343 ORTHO05D003187 2.3e-06 56.2 59 52.5
EL10Ac8g18327 Beta vulgaris HOM05D000343 ORTHO05D003187 2.3e-06 56.2 58 53.4
AUR62021341 Chenopodium quinoa HOM05D000343 ORTHO05D003187 2.3e-06 56.2 58 53.4
Ciclev10000354m.g Citrus clementina HOM05D000343 ORTHO05D003187 2.3e-06 56.2 52 57.7
Gohir.A05G003000 Gossypium hirsutum HOM05D000343 ORTHO05D003187 2.3e-06 56.2 58 53.4
Lj5C677G2 Lonicera japonica HOM05D000343 ORTHO05D003187 2.3e-06 56.2 58 55.2
Lalb_Chr12g0199521 Lupinus albus HOM05D000343 ORTHO05D003187 2.3e-06 56.2 58 51.7
Psat1g147280 Pisum sativum HOM05D000343 ORTHO05D003187 2.3e-06 56.2 73 46.6
VMungo1309G1508 Vigna mungo HOM05D000343 ORTHO05D003187 2.3e-06 56.2 60 50.0
Zm00001eb095020 Zea mays HOM05D000343 ORTHO05D003187 2.3e-06 56.2 52 53.8
Actinidia01292 Actinidia chinensis HOM05D000343 ORTHO05D003187 2.9e-06 55.8 53 54.7
CiPaw.02G099500 Carya illinoinensis HOM05D000343 ORTHO05D003187 2.9e-06 55.8 51 54.9
ClCG06G013530 Citrullus lanatus HOM05D000343 ORTHO05D003187 2.9e-06 55.8 52 51.9
MELO3C017438.2 Cucumis melo HOM05D000343 ORTHO05D003187 2.9e-06 55.8 52 51.9
CsaV3_1G031800 Cucumis sativus L. HOM05D000343 ORTHO05D003187 2.9e-06 55.8 52 51.9
Dinv25417 Davidia involucrata HOM05D000343 ORTHO05D003187 2.9e-06 55.8 58 53.4
Dinv25420 Davidia involucrata HOM05D000343 ORTHO05D003187 2.9e-06 55.8 58 53.4
Eucgr.C00131 Eucalyptus grandis HOM05D000343 ORTHO05D003187 2.9e-06 55.8 51 58.8
Lsat_1_v5_gn_5_82580 Lactuca sativa HOM05D000343 ORTHO05D003187 2.9e-06 55.8 58 53.4
Lsat_1_v5_gn_7_56421 Lactuca sativa HOM05D000343 ORTHO05D003187 2.9e-06 55.8 59 52.5
Lalb_Chr07g0180611 Lupinus albus HOM05D000343 ORTHO05D003187 2.9e-06 55.8 58 53.4
QL11p004640 Quercus lobata HOM05D000343 ORTHO05D003187 2.9e-06 55.8 64 46.9
SEGI_18993 Sequoiadendron giganteum HOM05D000343 ORTHO05D013318 2.9e-06 55.8 54 55.6
HPP92_017112 Vanilla planifolia HOM05D000343 ORTHO05D003187 2.9e-06 55.8 53 56.6
GSVIVG01010896001 Vitis vinifera HOM05D000343 ORTHO05D003187 2.9e-06 55.8 58 51.7
BcaC09g51787 Brassica carinata HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
BcaC09g51790 Brassica carinata HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
BcaNung04411 Brassica carinata HOM05D000343 ORTHO05D003187 3.8e-06 55.5 52 57.7
A01p07510 Brassica napus HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
A01p08030 Brassica napus HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
C01p08990 Brassica napus HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
C01p09010 Brassica napus HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
BolC1t00890H Brassica oleracea HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
BraA01t00696Z Brassica rapa HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
BraA01t00748Z Brassica rapa HOM05D000343 ORTHO05D003187 3.8e-06 55.5 62 51.6
DCAR_019821 Daucus carota HOM05D000343 ORTHO05D003187 3.8e-06 55.5 52 57.7
FAN09G2756 Fragaria x ananassa HOM05D000343 ORTHO05D013318 3.8e-06 55.5 58 51.7
Gohir.D05G003400 Gossypium hirsutum HOM05D000343 ORTHO05D003187 3.8e-06 55.5 58 53.4
Gohir.D08G092866 Gossypium hirsutum HOM05D000343 ORTHO05D003187 3.8e-06 55.5 58 50.0
Gorai.009G003000 Gossypium raimondii HOM05D000343 ORTHO05D003187 3.8e-06 55.5 58 53.4
HanXRQChr09g0256491 Helianthus annuus HOM05D000343 ORTHO05D003187 3.8e-06 55.5 58 53.4
Hma1.2p1_0022F.1_g014680 Hydrangea macrophylla HOM05D000343 ORTHO05D003187 3.8e-06 55.5 59 50.8
Lsat_1_v5_gn_7_55541 Lactuca sativa HOM05D000343 ORTHO05D003187 3.8e-06 55.5 59 50.8
MBI16_g34882_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D003187 3.8e-06 55.5 52 57.7
PGR142G2448 Punica granatum HOM05D000343 ORTHO05D003187 3.8e-06 55.5 52 57.7
Hund09054 Selenicereus undatus HOM05D000343 ORTHO05D003187 3.8e-06 55.5 52 57.7
TAR383G0119 Trochodendron aralioides HOM05D000343 ORTHO05D003187 3.8e-06 55.5 55 50.9
TAR383G0358 Trochodendron aralioides HOM05D000343 ORTHO05D003187 3.8e-06 55.5 52 53.8
arahy.Tifrunner.gnm1.ann1.6QFK0R Arachis hypogaea HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 50.0
arahy.Tifrunner.gnm1.ann1.NH81W7 Arachis hypogaea HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 50.0
A03p59460 Brassica napus HOM05D000343 ORTHO05D003187 5.0e-06 55.1 52 55.8
Cpa.g.sc95.24 Carica papaya HOM05D000343 ORTHO05D003187 5.0e-06 55.1 52 53.8
CiPaw.08G033600 Carya illinoinensis HOM05D000343 ORTHO05D003187 5.0e-06 55.1 64 46.9
CDE02G3869 Ceratophyllum demersum HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 55.2
Haze_21994 Corylus avellana HOM05D000343 ORTHO05D003187 5.0e-06 55.1 64 48.4
Thhalv10024341m.g Eutrema salsugineum HOM05D000343 ORTHO05D003187 5.0e-06 55.1 52 55.8
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 51.7
Gohir.A08G083400 Gossypium hirsutum HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 50.0
Gorai.004G098400 Gossypium raimondii HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 50.0
HanXRQChr09g0245521 Helianthus annuus HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 53.4
Lsat_1_v5_gn_7_55520 Lactuca sativa HOM05D000343 ORTHO05D003187 5.0e-06 55.1 58 53.4
Sp7g27960 Schrenkiella parvula HOM05D000343 ORTHO05D003187 5.0e-06 55.1 52 55.8
Zm00001eb226870 Zea mays HOM05D000343 ORTHO05D003187 5.0e-06 55.1 63 49.2
Atru.chr7.800 Acer truncatum HOM05D000343 ORTHO05D003187 6.6e-06 54.7 52 51.9
AL7G22090 Arabidopsis lyrata HOM05D000343 ORTHO05D003187 6.6e-06 54.7 52 53.8
BcaC01g02870 Brassica carinata HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 50.0
C03p59470 Brassica napus HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 50.0
C07p57510 Brassica napus HOM05D000343 ORTHO05D003187 6.6e-06 54.7 52 55.8
BolC3t18209H Brassica oleracea HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 50.0
BolC7t46218H Brassica oleracea HOM05D000343 ORTHO05D003187 6.6e-06 54.7 52 55.8
Ca_21247_v3 Cicer arietinum L. HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 48.3
DCAR_013543 Daucus carota HOM05D000343 ORTHO05D003187 6.6e-06 54.7 52 57.7
Lj4g0004945 Lotus japonicus HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 48.3
PGR142G1489 Punica granatum HOM05D000343 ORTHO05D003187 6.6e-06 54.7 60 51.7
Hund26314 Selenicereus undatus HOM05D000343 ORTHO05D003187 6.6e-06 54.7 54 55.6
Thecc.09G182100 Theobroma cacao HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 51.7
Thecc.09G182200 Theobroma cacao HOM05D000343 ORTHO05D003187 6.6e-06 54.7 58 51.7
Aa31LG8G16160 Aethionema arabicum HOM05D000343 ORTHO05D003187 8.6e-06 54.3 52 51.9
BcaB03g16707 Brassica carinata HOM05D000343 ORTHO05D003187 8.6e-06 54.3 62 50.0
BcaB08g34841 Brassica carinata HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 50.0
A06p32960 Brassica napus HOM05D000343 ORTHO05D003187 8.6e-06 54.3 52 53.8
BraA06t26228Z Brassica rapa HOM05D000343 ORTHO05D003187 8.6e-06 54.3 52 53.8
Cfa013436 Carpinus fangiana HOM05D000343 ORTHO05D003187 8.6e-06 54.3 64 46.9
Duzib150G0019 Durio zibethinus HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 50.0
Duzib170G0455 Durio zibethinus HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 50.0
MD00G1104400 Malus domestica HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 51.7
MD01G1183700 Malus domestica HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 51.7
MD13G1244500 Malus domestica HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 51.7
MD16G1252700 Malus domestica HOM05D000343 ORTHO05D003187 8.6e-06 54.3 58 51.7
Rhsim01G0119800 Rhododendron simsii HOM05D000343 ORTHO05D003187 8.6e-06 54.3 52 55.8
Sp3g32510 Schrenkiella parvula HOM05D000343 ORTHO05D003187 8.6e-06 54.3 52 53.8
SMO144G0033 Selaginella moellendorffii HOM05D000343 ORTHO05D003187 8.6e-06 54.3 55 52.7
TWI63G0419 Tripterygium wilfordii HOM05D000343 ORTHO05D003187 8.6e-06 54.3 52 51.9


User provided reference genes

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