Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17368 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 1.2e-67 259.6 123 100.0
SEGI_15497 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 3.9e-50 201.4 94 100.0
SEGI_29882 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 2.6e-30 135.6 96 66.7
SEGI_03614 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 2.3e-26 122.5 90 64.4
SEGI_32438 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 2.3e-26 122.5 90 64.4
SEGI_38019 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 2.3e-26 122.5 90 64.4
SEGI_24706 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 5.1e-26 121.3 90 64.4
SEGI_38973 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 1.1e-25 120.2 88 64.8
SEGI_40507 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 1.3e-24 116.7 90 62.2
Hma1.2p1_1705F.1_g298430 Hydrangea macrophylla HOM05D000899 ORTHO05D000710 4.4e-09 65.1 96 35.4
Lj1g0020322 Lotus japonicus HOM05D000899 ORTHO05D000710 4.4e-09 65.1 55 52.7
COL.COLO4_11429 Corchorus olitorius HOM05D000899 ORTHO05D000710 5.7e-09 64.7 100 40.0
MBI13_g09082_MAGBIO Magnolia biondii HOM05D000899 ORTHO05D000710 9.7e-09 63.9 95 38.9
Lj5C27G11 Lonicera japonica HOM05D000899 ORTHO05D000710 1.3e-08 63.5 54 55.6
Thecc.01G057300 Theobroma cacao HOM05D000899 ORTHO05D000710 1.3e-08 63.5 96 35.4
TAR383G0941 Trochodendron aralioides HOM05D000899 ORTHO05D000710 1.3e-08 63.5 93 37.6
MBI03_g13483_MAGBIO Magnolia biondii HOM05D000899 ORTHO05D000710 2.2e-08 62.8 97 39.2
DCAR_010887 Daucus carota HOM05D000899 ORTHO05D000710 2.8e-08 62.4 124 32.3
Oeu062442.2 Olea europaea HOM05D000899 ORTHO05D000710 3.7e-08 62.0 97 36.1
Eucgr.H01681 Eucalyptus grandis HOM05D000899 ORTHO05D000710 6.3e-08 61.2 104 38.5
SalBow7G3588 Salvia bowleyana HOM05D000899 ORTHO05D000710 6.3e-08 61.2 55 47.3
Nn5g30279 Nelumbo nucifera HOM05D000899 ORTHO05D000710 8.2e-08 60.8 98 35.7
CSS0029800 Camellia sinensis var. sinensis HOM05D000899 ORTHO05D000710 1.1e-07 60.5 70 42.9
Psat3g000400 Pisum sativum HOM05D000899 ORTHO05D000710 1.1e-07 60.5 100 32.0
Migut.H00427 Erythranthe guttata HOM05D000899 ORTHO05D000710 1.4e-07 60.1 100 35.0
Oeu053412.2 Olea europaea HOM05D000899 ORTHO05D000710 1.8e-07 59.7 99 33.3
GSVIVG01022125001 Vitis vinifera HOM05D000899 ORTHO05D000710 1.8e-07 59.7 99 34.3
GSVIVG01022121001 Vitis vinifera HOM05D000899 ORTHO05D000710 2.4e-07 59.3 96 37.5
Aa31LG8G1620 Aethionema arabicum HOM05D000899 ORTHO05D000710 3.1e-07 58.9 99 33.3
MSTRG.26840 Avicennia marina HOM05D000899 ORTHO05D000710 4.1e-07 58.5 100 35.0
Dinv20372 Davidia involucrata HOM05D000899 ORTHO05D000710 4.1e-07 58.5 52 50.0
SEGI_28491 Sequoiadendron giganteum HOM05D000899 ORTHO05D000710 4.1e-07 58.5 92 39.1
Thecc.08G005400 Theobroma cacao HOM05D000899 ORTHO05D000710 4.1e-07 58.5 97 34.0
Atru.chr3.314 Acer truncatum HOM05D000899 ORTHO05D000710 5.3e-07 58.2 97 37.1
PGSC0003DMG400009155 Solanum tuberosum HOM05D000899 ORTHO05D000710 5.3e-07 58.2 55 45.5
Dinv29990 Davidia involucrata HOM05D000899 ORTHO05D000710 7.0e-07 57.8 94 31.9
Manes.13G123800 Manihot esculenta HOM05D000899 ORTHO05D000710 7.0e-07 57.8 97 35.1
SalBow5G4300 Salvia bowleyana HOM05D000899 ORTHO05D000710 7.0e-07 57.8 98 37.8
SalBow5G4996 Salvia bowleyana HOM05D000899 ORTHO05D000710 7.0e-07 57.8 98 37.8
MSTRG.9548 Avicennia marina HOM05D000899 ORTHO05D000710 9.1e-07 57.4 55 41.8
Eucgr.H01678 Eucalyptus grandis HOM05D000899 ORTHO05D000710 9.1e-07 57.4 98 39.8
Eucgr.H02038 Eucalyptus grandis HOM05D000899 ORTHO05D000710 9.1e-07 57.4 104 37.5
GSVIVG01016653001 Vitis vinifera HOM05D000899 ORTHO05D000710 9.1e-07 57.4 95 32.6
Ca_09562_v3 Cicer arietinum L. HOM05D000899 ORTHO05D000710 1.2e-06 57.0 54 44.4
ClCG07G014210 Citrullus lanatus HOM05D000899 ORTHO05D000710 1.2e-06 57.0 95 33.7
Sed0001573 Sechium edule HOM05D000899 ORTHO05D000710 1.2e-06 57.0 90 37.8
CAN.G790.48 Capsicum annuum HOM05D000899 ORTHO05D000710 1.5e-06 56.6 54 44.4
Lj4A150T38 Lonicera japonica HOM05D000899 ORTHO05D000710 1.5e-06 56.6 97 36.1
SalBow5G3594 Salvia bowleyana HOM05D000899 ORTHO05D000710 1.5e-06 56.6 51 47.1
SalBow5G5199 Salvia bowleyana HOM05D000899 ORTHO05D000710 1.5e-06 56.6 51 47.1
Solyc12g055730.3 Solanum lycopersicum HOM05D000899 ORTHO05D000710 1.5e-06 56.6 68 42.6
PGSC0003DMG400028858 Solanum tuberosum HOM05D000899 ORTHO05D000710 1.5e-06 56.6 68 42.6
SGA_v2.0_scaffold68G22824 Striga asiatica HOM05D000899 ORTHO05D000710 1.5e-06 56.6 70 41.4
COL.COLO4_11426 Corchorus olitorius HOM05D000899 ORTHO05D000710 2.0e-06 56.2 98 35.7
Eucgr.H01667 Eucalyptus grandis HOM05D000899 ORTHO05D000710 2.0e-06 56.2 96 36.5
Eucgr.H01675 Eucalyptus grandis HOM05D000899 ORTHO05D000710 2.0e-06 56.2 98 35.7
Eucgr.H02044 Eucalyptus grandis HOM05D000899 ORTHO05D000710 2.0e-06 56.2 98 36.7
ATR0006G068 Amborella trichopoda HOM05D000899 ORTHO05D000710 2.6e-06 55.8 100 36.0
COL.COLO4_11427 Corchorus olitorius HOM05D000899 ORTHO05D000710 2.6e-06 55.8 98 34.7
COL.COLO4_30885 Corchorus olitorius HOM05D000899 ORTHO05D000710 2.6e-06 55.8 95 33.7
DCAR_010888 Daucus carota HOM05D000899 ORTHO05D000710 2.6e-06 55.8 51 47.1
Eucgr.H02043 Eucalyptus grandis HOM05D000899 ORTHO05D000710 2.6e-06 55.8 98 35.7
PGR102G1740 Punica granatum HOM05D000899 ORTHO05D000710 2.6e-06 55.8 100 36.0
QL05p000599 Quercus lobata HOM05D000899 ORTHO05D000710 2.6e-06 55.8 95 32.6
Rhsim08G0246000 Rhododendron simsii HOM05D000899 ORTHO05D000710 2.6e-06 55.8 54 44.4
Cc04_g00570 Coffea canephora HOM05D000899 ORTHO05D000710 3.4e-06 55.5 68 39.7
Eucgr.H02046 Eucalyptus grandis HOM05D000899 ORTHO05D000710 3.4e-06 55.5 98 36.7
Gohir.A11G046700 Gossypium hirsutum HOM05D000899 ORTHO05D000710 3.4e-06 55.5 102 34.3
MD09G1171500 Malus domestica HOM05D000899 ORTHO05D000710 3.4e-06 55.5 96 35.4
MD15G1284800 Malus domestica HOM05D000899 ORTHO05D000710 3.4e-06 55.5 54 46.3
Nn4g25122 Nelumbo nucifera HOM05D000899 ORTHO05D000710 3.4e-06 55.5 92 33.7
Nitab4.5_0011027g0010 Nicotiana tabacum HOM05D000899 ORTHO05D000710 4.5e-06 55.1 99 34.3
Prupe.3G029900 Prunus persica HOM05D000899 ORTHO05D000710 4.5e-06 55.1 103 35.9
TWI56G0602 Tripterygium wilfordii HOM05D000899 ORTHO05D000710 4.5e-06 55.1 99 34.3
TAR628G1221 Trochodendron aralioides HOM05D000899 ORTHO05D000710 4.5e-06 55.1 98 32.7
GSVIVG01009480001 Vitis vinifera HOM05D000899 ORTHO05D000710 4.5e-06 55.1 102 37.3
Actinidia23287 Actinidia chinensis HOM05D000899 ORTHO05D000710 5.9e-06 54.7 112 33.0
Migut.D00905 Erythranthe guttata HOM05D000899 ORTHO05D000710 5.9e-06 54.7 52 46.2
CAN.G390.41 Capsicum annuum HOM05D000899 ORTHO05D000710 7.7e-06 54.3 51 49.0
CAN.G660.13 Capsicum annuum HOM05D000899 ORTHO05D000710 7.7e-06 54.3 100 36.0
Dinv39841 Davidia involucrata HOM05D000899 ORTHO05D000710 7.7e-06 54.3 96 31.2
Gohir.D11G050100 Gossypium hirsutum HOM05D000899 ORTHO05D000710 7.7e-06 54.3 80 40.0
Hma1.2p1_0090F.1_g045650 Hydrangea macrophylla HOM05D000899 ORTHO05D000710 7.7e-06 54.3 52 44.2
Lsat_1_v5_gn_4_89401 Lactuca sativa HOM05D000899 ORTHO05D000710 7.7e-06 54.3 68 39.7
MD15G1284700 Malus domestica HOM05D000899 ORTHO05D000710 7.7e-06 54.3 94 34.0
Nitab4.5_0014057g0010 Nicotiana tabacum HOM05D000899 ORTHO05D000710 7.7e-06 54.3 54 42.6
TWI53G1210 Tripterygium wilfordii HOM05D000899 ORTHO05D000710 7.7e-06 54.3 98 34.7
GSVIVG01022123001 Vitis vinifera HOM05D000899 ORTHO05D000710 7.7e-06 54.3 99 34.3


User provided reference genes

Program Settings