Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17309 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 8.9e-190 666.8 336 100.0
SEGI_04074 Sequoiadendron giganteum HOM05D024118 ORTHO05D384547 3.5e-85 319.3 158 100.0
SEGI_22353 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 3.4e-72 276.2 138 100.0
SEGI_11419 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 5.0e-39 166.0 352 38.1
SEGI_08973 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 1.9e-35 154.1 386 33.7
SEGI_28244 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 8.2e-26 122.1 373 31.4
Mapoly0012s0202 Marchantia polymorpha HOM05D003014 ORTHO05D003233 3.9e-20 103.2 263 32.3
Pp3c3_810 Physcomitrium patens HOM05D003014 ORTHO05D003233 2.5e-14 84.0 193 32.1
Pp3c26_15000 Physcomitrium patens HOM05D003014 ORTHO05D003233 8.0e-13 79.0 203 30.5
SMO147G0123 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 8.0e-13 79.0 180 33.9
SMO240G0043 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 1.0e-12 78.6 207 29.0
Pp3c13_2080 Physcomitrium patens HOM05D003014 ORTHO05D003233 1.8e-12 77.8 242 27.7
Sabra14G0017800 Salix brachista HOM05D003014 ORTHO05D003233 3.0e-12 77.0 210 29.5
Prupe.8G127700 Prunus persica HOM05D003014 ORTHO05D003233 5.2e-12 76.3 198 29.8
Mapoly0126s0029 Marchantia polymorpha HOM05D003014 ORTHO05D003233 1.5e-11 74.7 198 30.3
Cpa.g.sc21.177 Carica papaya HOM05D003014 ORTHO05D003233 2.0e-11 74.3 215 27.0
GSVIVG01009469001 Vitis vinifera HOM05D003014 ORTHO05D003233 2.0e-11 74.3 204 27.5
Cc02_g18940 Coffea canephora HOM05D003014 ORTHO05D003233 2.6e-11 73.9 286 25.5
Thecc.08G003900 Theobroma cacao HOM05D003014 ORTHO05D003233 2.6e-11 73.9 234 27.4
Peaxi162Scf00152g00131 Petunia axillaris HOM05D003014 ORTHO05D003233 4.4e-11 73.2 226 27.9
QL11p034987 Quercus lobata HOM05D003014 ORTHO05D003233 4.4e-11 73.2 218 27.1
Ciclev10003973m.g Citrus clementina HOM05D003014 ORTHO05D003233 5.7e-11 72.8 227 26.0
Prupe.1G432900 Prunus persica HOM05D003014 ORTHO05D003233 5.7e-11 72.8 185 27.6
Hma1.2p1_0370F.1_g137650 Hydrangea macrophylla HOM05D003014 ORTHO05D003233 1.3e-10 71.6 205 28.8
TAR376G0856 Trochodendron aralioides HOM05D003014 ORTHO05D003233 1.7e-10 71.2 216 26.9
Manes.18G039500 Manihot esculenta HOM05D003014 ORTHO05D003233 2.2e-10 70.9 206 29.6
Nitab4.5_0000292g0060 Nicotiana tabacum HOM05D003014 ORTHO05D003233 2.2e-10 70.9 204 27.0
Nn1g04801 Nelumbo nucifera HOM05D003014 ORTHO05D003233 2.8e-10 70.5 237 25.7
Sabra16G0191500 Salix brachista HOM05D000187 ORTHO05D000230 2.8e-10 70.5 206 29.6
Nitab4.5_0001230g0010 Nicotiana tabacum HOM05D003014 ORTHO05D003233 3.7e-10 70.1 194 28.4
Oeu001777.1 Olea europaea HOM05D003014 ORTHO05D003233 3.7e-10 70.1 186 28.0
QL02p004396 Quercus lobata HOM05D003014 ORTHO05D003233 4.8e-10 69.7 163 28.8
Oeu013724.1 Olea europaea HOM05D003014 ORTHO05D003233 6.3e-10 69.3 188 28.2
TWI56G0629 Tripterygium wilfordii HOM05D003014 ORTHO05D003233 6.3e-10 69.3 186 24.7
Potri.014G025900 Populus trichocarpa HOM05D003014 ORTHO05D003233 8.2e-10 68.9 216 28.2
HanXRQChr03g0074841 Helianthus annuus HOM05D003014 ORTHO05D003233 1.1e-09 68.6 208 27.4
Potri.001G305100 Populus trichocarpa HOM05D003014 ORTHO05D003233 1.1e-09 68.6 278 25.9
Pp3c1_8930 Physcomitrium patens HOM05D003014 ORTHO05D003233 1.4e-09 68.2 196 27.0
SalBow6G1753 Salvia bowleyana HOM05D003014 ORTHO05D003233 1.8e-09 67.8 166 28.9
ECA240G1347 Erigeron canadensis HOM05D003014 ORTHO05D003233 2.4e-09 67.4 195 25.6
unitig_0.g90 Utricularia gibba HOM05D003014 ORTHO05D003233 2.4e-09 67.4 173 30.6
MD15G1079900 Malus domestica HOM05D003014 ORTHO05D003233 3.1e-09 67.0 185 27.6
Pp3c2_31440 Physcomitrium patens HOM05D003014 ORTHO05D003233 3.1e-09 67.0 198 28.3
CiPaw.06G171700 Carya illinoinensis HOM05D003014 ORTHO05D003233 4.1e-09 66.6 259 25.9
Sed0010940 Sechium edule HOM05D003014 ORTHO05D003233 4.1e-09 66.6 167 29.9
GSVIVG01031718001 Vitis vinifera HOM05D003014 ORTHO05D003233 4.1e-09 66.6 188 29.3
arahy.Tifrunner.gnm1.ann1.HVT10G Arachis hypogaea HOM05D000670 ORTHO05D000529 5.3e-09 66.2 159 25.2
ECA240G0588 Erigeron canadensis HOM05D000071 ORTHO05D003233 5.3e-09 66.2 232 23.3
Dinv42167 Davidia involucrata HOM05D003014 ORTHO05D003233 7.0e-09 65.9 249 26.1
TWI15G0365 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 7.0e-09 65.9 198 29.3
TWI36G1467 Tripterygium wilfordii HOM05D003014 ORTHO05D003233 7.0e-09 65.9 188 25.5
Phvul.003G048100 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 9.1e-09 65.5 177 27.7
AagrBONN_evm.TU.Sc2ySwM_228.3495 Anthoceros agrestis HOM05D003014 ORTHO05D003233 1.2e-08 65.1 201 27.9
CSS0023387 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 1.2e-08 65.1 301 24.3
SEGI_00209 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 1.2e-08 65.1 177 28.8
vmacro02036 Vaccinium macrocarpon HOM05D003014 ORTHO05D003233 1.2e-08 65.1 207 28.5
arahy.Tifrunner.gnm1.ann1.N7IIZM Arachis hypogaea HOM05D000670 ORTHO05D000529 1.6e-08 64.7 186 25.3
SMO270G0033 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 1.6e-08 64.7 163 32.5
HPP92_002772 Vanilla planifolia HOM05D003014 ORTHO05D003233 1.6e-08 64.7 214 24.3
Lsat_1_v5_gn_9_110961 Lactuca sativa HOM05D003014 ORTHO05D003233 2.0e-08 64.3 186 26.9
Manes.10G080300 Manihot esculenta HOM05D003014 ORTHO05D003233 2.6e-08 63.9 190 26.8
SMO232G0131 Selaginella moellendorffii HOM05D000567 ORTHO05D000323 2.6e-08 63.9 168 29.2
SGA_v2.0_scaffold393G50697 Striga asiatica HOM05D003014 ORTHO05D003233 3.5e-08 63.5 246 24.8
TWI81G0152 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 3.5e-08 63.5 167 32.9
Actinidia14565 Actinidia chinensis HOM05D001604 ORTHO05D001432 4.5e-08 63.2 220 28.2
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 4.5e-08 63.2 190 26.8
CSS0015958 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 5.9e-08 62.8 206 26.2
Gohir.D01G110400 Gossypium hirsutum HOM05D003014 ORTHO05D003233 5.9e-08 62.8 199 25.1
Gorai.002G135000 Gossypium raimondii HOM05D003014 ORTHO05D003233 5.9e-08 62.8 199 25.1
Oeu007296.1 Olea europaea HOM05D003014 ORTHO05D003233 5.9e-08 62.8 184 28.3
PSO170G5216 Papaver somniferum HOM05D003014 ORTHO05D003233 5.9e-08 62.8 251 24.3
Sc08g0001710 Simmondsia chinensis HOM05D003014 ORTHO05D003233 5.9e-08 62.8 249 22.9
Atru.chr13.721 Acer truncatum HOM05D003014 ORTHO05D003233 7.7e-08 62.4 219 26.9
Gohir.A01G122633 Gossypium hirsutum HOM05D003014 ORTHO05D003233 1.0e-07 62.0 185 24.3
Gohir.A01G122666 Gossypium hirsutum HOM05D003014 ORTHO05D003233 1.0e-07 62.0 185 24.3
Nitab4.5_0001428g0060 Nicotiana tabacum HOM05D003014 ORTHO05D003233 1.0e-07 62.0 256 27.0
Sabra09G0076200 Salix brachista HOM05D003014 ORTHO05D003233 1.0e-07 62.0 194 26.3
CSS0044289 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 1.3e-07 61.6 304 24.7
Ciclev10030106m.g Citrus clementina HOM05D003014 ORTHO05D003233 1.3e-07 61.6 277 24.9
Dinv15730 Davidia involucrata HOM05D003014 ORTHO05D003233 1.3e-07 61.6 208 28.4
Dinv32065 Davidia involucrata HOM05D000469 ORTHO05D000323 1.3e-07 61.6 287 25.1
Nitab4.5_0007431g0020 Nicotiana tabacum HOM05D003014 ORTHO05D003233 1.3e-07 61.6 199 27.6
A09p13790 Brassica napus HOM05D001604 ORTHO05D001432 1.7e-07 61.2 190 30.0
BraA09t37031Z Brassica rapa HOM05D001604 ORTHO05D001432 1.7e-07 61.2 190 30.0
Duzib132G1208 Durio zibethinus HOM05D003014 ORTHO05D003233 1.7e-07 61.2 182 26.9
Manes.02G019350 Manihot esculenta HOM05D001604 ORTHO05D001432 1.7e-07 61.2 200 31.0
CDE02G2363 Ceratophyllum demersum HOM05D003014 ORTHO05D003233 2.2e-07 60.8 172 27.3
Psat0s5079g0040 Pisum sativum HOM05D003014 ORTHO05D003233 2.2e-07 60.8 95 38.9
TPR.G22418 Trifolium pratense HOM05D000670 ORTHO05D000529 2.2e-07 60.8 184 28.8
Gohir.A13G041500 Gossypium hirsutum HOM05D003014 ORTHO05D003233 2.9e-07 60.5 184 25.5
Gohir.D13G040200 Gossypium hirsutum HOM05D003014 ORTHO05D003233 2.9e-07 60.5 187 23.0
Medtr6g047570 Medicago truncatula HOM05D000670 ORTHO05D000529 2.9e-07 60.5 175 28.6
Psat4g079600 Pisum sativum HOM05D000670 ORTHO05D000529 2.9e-07 60.5 156 31.4
THA.LOC104806046 Tarenaya hassleriana HOM05D003014 ORTHO05D003233 2.9e-07 60.5 201 26.9
VMungo0251G1556 Vigna mungo HOM05D003014 ORTHO05D003233 2.9e-07 60.5 173 26.0
Zm00001eb429330 Zea mays HOM05D001604 ORTHO05D001432 2.9e-07 60.5 184 27.7
AagrBONN_evm.TU.Sc2ySwM_117.966 Anthoceros agrestis HOM05D000670 ORTHO05D000529 3.8e-07 60.1 170 27.1
Eucgr.G01493 Eucalyptus grandis HOM05D003014 ORTHO05D003233 3.8e-07 60.1 190 26.3
Lj4g0023024 Lotus japonicus HOM05D000670 ORTHO05D000529 3.8e-07 60.1 176 25.0
Peaxi162Scf00016g02026 Petunia axillaris HOM05D003014 ORTHO05D003233 3.8e-07 60.1 199 26.1
Gorai.013G045100 Gossypium raimondii HOM05D003014 ORTHO05D003233 5.0e-07 59.7 183 23.0
Phvul.003G231000 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 5.0e-07 59.7 169 24.3
Thecc.02G102900 Theobroma cacao HOM05D003014 ORTHO05D003233 5.0e-07 59.7 188 25.5
TWI59G0726 Tripterygium wilfordii HOM05D000670 ORTHO05D000529 5.0e-07 59.7 322 22.7
MBI17_g08637_MAGBIO Magnolia biondii HOM05D003014 ORTHO05D003233 6.5e-07 59.3 218 25.2
Zm00001eb025850 Zea mays HOM05D000670 ORTHO05D049987 6.5e-07 59.3 148 29.1
ATR0584G279 Amborella trichopoda HOM05D003014 ORTHO05D003233 8.5e-07 58.9 102 35.3
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 8.5e-07 58.9 165 27.3
Lsat_1_v5_gn_7_83480 Lactuca sativa HOM05D000670 ORTHO05D000529 8.5e-07 58.9 170 24.7
Lj4g0009952 Lotus japonicus HOM05D003014 ORTHO05D003233 8.5e-07 58.9 230 23.5
Mapoly0114s0037 Marchantia polymorpha HOM05D012101 ORTHO05D013612 8.5e-07 58.9 150 26.7
Aa31LG2G860 Aethionema arabicum HOM05D001604 ORTHO05D001432 1.1e-06 58.5 280 26.8
Duzib187G1813 Durio zibethinus HOM05D000670 ORTHO05D000529 1.1e-06 58.5 192 25.0
Medtr0011s0260 Medicago truncatula HOM05D000670 ORTHO05D000529 1.1e-06 58.5 144 27.8
Phvul.010G043200 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 1.1e-06 58.5 169 26.0
THA.LOC104817999 Tarenaya hassleriana HOM05D001604 ORTHO05D001432 1.1e-06 58.5 206 29.6
TAR381G0350 Trochodendron aralioides HOM05D003014 ORTHO05D003233 1.1e-06 58.5 200 24.5
AUR62027064 Chenopodium quinoa HOM05D000670 ORTHO05D000529 1.5e-06 58.2 152 28.9
CsaV3_7G008580 Cucumis sativus L. HOM05D003014 ORTHO05D003233 1.5e-06 58.2 82 37.8
Potri.003G128000 Populus trichocarpa HOM05D001604 ORTHO05D001432 1.5e-06 58.2 277 27.4
Rhsim11G0164600 Rhododendron simsii HOM05D003014 ORTHO05D003233 1.5e-06 58.2 66 43.9
vmacro11362 Vaccinium macrocarpon HOM05D001604 ORTHO05D001432 1.5e-06 58.2 217 26.3
Actinidia02003 Actinidia chinensis HOM05D001604 ORTHO05D001432 1.9e-06 57.8 222 28.8
ClCG02G005950 Citrullus lanatus HOM05D003014 ORTHO05D003233 1.9e-06 57.8 77 42.9
MELO3C018451.2 Cucumis melo HOM05D003014 ORTHO05D003233 1.9e-06 57.8 108 37.0
Phvul.010G043400 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 1.9e-06 57.8 269 22.7
PGR042G3868 Punica granatum HOM05D003014 ORTHO05D003233 1.9e-06 57.8 75 38.7
Lj9C357T7 Lonicera japonica HOM05D003014 ORTHO05D003233 2.5e-06 57.4 151 29.1
Lalb_Chr20g0108401 Lupinus albus HOM05D003014 ORTHO05D003233 2.5e-06 57.4 171 26.9
Hund00406 Selenicereus undatus HOM05D000670 ORTHO05D000529 2.5e-06 57.4 152 25.7
Aqoxy439s001 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 3.2e-06 57.0 160 26.9
Aqoxy6G00605 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 3.2e-06 57.0 160 26.9
COL.COLO4_32636 Corchorus olitorius HOM05D003014 ORTHO05D003233 3.2e-06 57.0 58 46.6
Lj5P224T39 Lonicera japonica HOM05D000670 ORTHO05D000529 3.2e-06 57.0 182 24.7
Os01g0577300 Oryza sativa ssp. japonica HOM05D001604 ORTHO05D001432 3.2e-06 57.0 56 55.4
Phvul.003G231200 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 3.2e-06 57.0 136 25.0
SMO347G0063 Selaginella moellendorffii HOM05D000567 ORTHO05D000323 3.2e-06 57.0 176 30.7
TPR.G22425 Trifolium pratense HOM05D000670 ORTHO05D000529 3.2e-06 57.0 158 26.6
TPR.G2753 Trifolium pratense HOM05D000469 ORTHO05D000323 3.2e-06 57.0 222 26.1
Actinidia12937 Actinidia chinensis HOM05D003014 ORTHO05D003233 4.2e-06 56.6 90 36.7
Ciclev10027158m.g Citrus clementina HOM05D000670 ORTHO05D000529 4.2e-06 56.6 150 26.0
Duzib084G1235 Durio zibethinus HOM05D001604 ORTHO05D001432 4.2e-06 56.6 172 30.2
FAN28G0905 Fragaria x ananassa HOM05D000670 ORTHO05D000529 4.2e-06 56.6 146 26.7
Gohir.D08G201300 Gossypium hirsutum HOM05D001604 ORTHO05D001432 4.2e-06 56.6 164 28.7
PSO210G4688 Papaver somniferum HOM05D003014 ORTHO05D003233 4.2e-06 56.6 85 41.2
Peaxi162Scf00216g00008 Petunia axillaris HOM05D000670 ORTHO05D000529 4.2e-06 56.6 173 26.0
Phvul.010G043300 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 4.2e-06 56.6 174 25.9
TPR.G26013 Trifolium pratense HOM05D000670 ORTHO05D000529 4.2e-06 56.6 155 25.2
VMungo0251G3300 Vigna mungo HOM05D000670 ORTHO05D000529 4.2e-06 56.6 142 24.6
Lalb_Chr05g0220491 Lupinus albus HOM05D000670 ORTHO05D000529 5.5e-06 56.2 274 21.9
Medtr4g067010 Medicago truncatula HOM05D000670 ORTHO05D000529 5.5e-06 56.2 171 28.1
Rhsim02G0231600 Rhododendron simsii HOM05D001604 ORTHO05D001432 5.5e-06 56.2 219 26.0
SEGI_08608 Sequoiadendron giganteum HOM05D000670 ORTHO05D000529 5.5e-06 56.2 180 23.9
Thecc.03G279300 Theobroma cacao HOM05D001604 ORTHO05D001432 5.5e-06 56.2 172 29.1
MSTRG.11982 Avicennia marina HOM05D001604 ORTHO05D001432 7.2e-06 55.8 255 25.5
Ca_22081_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 7.2e-06 55.8 148 25.7
Haze_10360 Corylus avellana HOM05D000670 ORTHO05D000529 7.2e-06 55.8 183 24.6
Thhalv10023356m.g Eutrema salsugineum HOM05D001604 ORTHO05D001432 7.2e-06 55.8 197 28.9
FvH4_1g18740 Fragaria vesca HOM05D000670 ORTHO05D000529 7.2e-06 55.8 140 26.4
FAN19G0634 Fragaria x ananassa HOM05D000670 ORTHO05D000529 7.2e-06 55.8 140 26.4
HanXRQChr08g0227161 Helianthus annuus HOM05D000670 ORTHO05D000529 7.2e-06 55.8 155 27.1
Hund06488 Selenicereus undatus HOM05D000670 ORTHO05D000529 7.2e-06 55.8 165 25.5
vmacro22818 Vaccinium macrocarpon HOM05D001604 ORTHO05D001432 7.2e-06 55.8 217 25.8
CAN.G1838.2 Capsicum annuum HOM05D003014 ORTHO05D003233 9.4e-06 55.5 80 40.0
Ca_24654_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 9.4e-06 55.5 148 24.3
Eucgr.H02396 Eucalyptus grandis HOM05D000670 ORTHO05D000529 9.4e-06 55.5 195 25.6
Glyma.07G117600 Glycine max HOM05D000670 ORTHO05D000529 9.4e-06 55.5 133 26.3
Gorai.004G212200 Gossypium raimondii HOM05D001604 ORTHO05D001432 9.4e-06 55.5 164 28.7
Lj9C355T10 Lonicera japonica HOM05D003014 ORTHO05D003233 9.4e-06 55.5 151 28.5
Medtr4g097920 Medicago truncatula HOM05D000670 ORTHO05D000529 9.4e-06 55.5 145 27.6
Phvul.010G158300 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 9.4e-06 55.5 231 25.5
SalBow6G6778 Salvia bowleyana HOM05D003014 ORTHO05D003233 9.4e-06 55.5 149 28.2
SEGI_21017 Sequoiadendron giganteum HOM05D016707 ORTHO05D014682 9.4e-06 55.5 173 29.5
SEGI_29446 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 9.4e-06 55.5 157 27.4
TPR.G22430 Trifolium pratense HOM05D000670 ORTHO05D000529 9.4e-06 55.5 169 25.4
TPR.G29424 Trifolium pratense HOM05D000469 ORTHO05D000323 9.4e-06 55.5 243 23.0


User provided reference genes

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