Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.5e-32 141.7 118 100.0
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.1e-08 62.8 38 68.4
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.7e-08 62.4 43 62.8
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.7e-08 62.4 44 63.6
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 3.5e-08 62.0 44 65.9
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-08 62.0 44 63.6
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 4.6e-08 61.6 37 70.3
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.0e-08 61.2 38 65.8
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 7.9e-08 60.8 37 67.6
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.0e-07 60.5 50 54.0
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.0e-07 60.5 44 59.1
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.0e-07 60.5 41 63.4
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.3e-07 60.1 38 63.2
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.3e-07 60.1 42 59.5
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-07 59.7 38 68.4
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-07 59.3 38 65.8
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.9e-07 58.5 38 63.2
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.9e-07 58.5 38 63.2
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 3.9e-07 58.5 38 68.4
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.1e-07 58.2 44 61.4
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.1e-07 58.2 44 56.8
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.7e-07 57.8 47 59.6
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.7e-07 57.8 44 59.1
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.7e-07 57.4 39 61.5
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 1.9e-06 56.2 38 65.8
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.9e-06 56.2 38 65.8
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.9e-06 56.2 38 65.8
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 2.5e-06 55.8 35 65.7
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.3e-06 55.5 39 61.5
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 4.3e-06 55.1 38 60.5
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.3e-06 55.1 39 61.5
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 4.3e-06 55.1 35 62.9
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 5.6e-06 54.7 38 63.2
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.6e-06 54.7 44 59.1
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 9.6e-06 53.9 44 59.1
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.6e-06 53.9 44 56.8


User provided reference genes

Program Settings