Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17169 Sequoiadendron giganteum HOM05D003488 ORTHO05D022332 1.6e-58 229.2 114 100.0
SEGI_25159 Sequoiadendron giganteum HOM05D003488 ORTHO05D004214 2.6e-48 195.3 97 99.0
ATR0776G025 Amborella trichopoda HOM05D003488 ORTHO05D004214 5.6e-43 177.6 114 72.8
TAR633G2222 Trochodendron aralioides HOM05D003488 ORTHO05D004214 2.3e-41 172.2 114 70.2
Aqoxy4G02784 Aquilegia oxysepala HOM05D003488 ORTHO05D004214 5.8e-40 167.5 114 66.7
QL01p012332 Quercus lobata HOM05D003488 ORTHO05D004214 7.5e-40 167.2 113 68.1
CSS0019661 Camellia sinensis var. sinensis HOM05D003488 ORTHO05D004214 9.8e-40 166.8 114 65.8
Nitab4.5_0013628g0020 Nicotiana tabacum HOM05D003488 ORTHO05D004214 6.4e-39 164.1 118 65.3
Peaxi162Scf00003g00057 Petunia axillaris HOM05D003488 ORTHO05D004214 8.3e-39 163.7 118 65.3
DCAR_013382 Daucus carota HOM05D003488 ORTHO05D004214 1.1e-38 163.3 114 64.9
Nn6g34912 Nelumbo nucifera HOM05D003488 ORTHO05D004214 1.1e-38 163.3 114 66.7
TWI31G0838 Tripterygium wilfordii HOM05D003488 ORTHO05D004214 1.4e-38 162.9 114 66.7
Sabra04G0137300 Salix brachista HOM05D003488 ORTHO05D004214 3.2e-38 161.8 114 63.2
Potri.009G164200 Populus trichocarpa HOM05D003488 ORTHO05D004214 4.1e-38 161.4 114 65.8
Sopen11g027050 Solanum pennellii HOM05D003488 ORTHO05D004214 4.1e-38 161.4 118 63.6
Dinv31679 Davidia involucrata HOM05D003488 ORTHO05D004214 5.4e-38 161.0 114 64.9
PSO384G1288 Papaver somniferum HOM05D003488 ORTHO05D004214 5.4e-38 161.0 114 66.7
Cpa.g.sc1448.1 Carica papaya HOM05D003488 ORTHO05D004214 9.2e-38 160.2 114 64.0
Ciclev10028521m.g Citrus clementina HOM05D003488 ORTHO05D004214 2.1e-37 159.1 114 63.2
Lj1P237T11 Lonicera japonica HOM05D003488 ORTHO05D004214 2.7e-37 158.7 118 63.6
PSO339G0354 Papaver somniferum HOM05D003488 ORTHO05D004214 2.7e-37 158.7 114 65.8
Gohir.A09G095500 Gossypium hirsutum HOM05D003488 ORTHO05D004214 6.0e-37 157.5 114 64.0
MSTRG.26643 Avicennia marina HOM05D003488 ORTHO05D004214 7.8e-37 157.1 114 60.5
Nn2g14149 Nelumbo nucifera HOM05D003488 ORTHO05D004214 7.8e-37 157.1 114 64.0
Phvul.011G094000 Phaseolus vulgaris HOM05D003488 ORTHO05D004214 7.8e-37 157.1 110 63.6
Sopen10g032950 Solanum pennellii HOM05D003488 ORTHO05D004214 7.8e-37 157.1 114 60.5
PGSC0003DMG400028258 Solanum tuberosum HOM05D003488 ORTHO05D004214 7.8e-37 157.1 114 60.5
CsaV3_6G040650 Cucumis sativus L. HOM05D003488 ORTHO05D004214 1.0e-36 156.8 114 63.2
Dinv21216 Davidia involucrata HOM05D003488 ORTHO05D004214 1.0e-36 156.8 114 64.0
Rhsim01G0205200 Rhododendron simsii HOM05D003488 ORTHO05D004214 1.0e-36 156.8 114 63.2
SEGI_39785 Sequoiadendron giganteum HOM05D003488 ORTHO05D004214 1.0e-36 156.8 114 67.5
Atru.chr3.3255 Acer truncatum HOM05D003488 ORTHO05D004214 1.3e-36 156.4 114 62.3
Gorai.006G111900 Gossypium raimondii HOM05D003488 ORTHO05D004214 1.3e-36 156.4 114 64.9
Peaxi162Scf00290g00084 Petunia axillaris HOM05D003488 ORTHO05D004214 1.3e-36 156.4 114 62.3
Solyc10g083480.2 Solanum lycopersicum HOM05D003488 ORTHO05D004214 1.3e-36 156.4 114 60.5
COL.COLO4_19885 Corchorus olitorius HOM05D003488 ORTHO05D004214 1.7e-36 156.0 114 63.2
Gohir.D09G095200 Gossypium hirsutum HOM05D003488 ORTHO05D004214 1.7e-36 156.0 114 64.0
MBI17_g08366_MAGBIO Magnolia biondii HOM05D003488 ORTHO05D004214 3.0e-36 155.2 111 66.7
Nitab4.5_0000755g0230 Nicotiana tabacum HOM05D003488 ORTHO05D004214 3.0e-36 155.2 110 66.4
Phvul.011G093800 Phaseolus vulgaris HOM05D003488 ORTHO05D004214 3.0e-36 155.2 114 61.4
SGA_v2.0_scaffold75G24751 Striga asiatica HOM05D003488 ORTHO05D004214 3.9e-36 154.8 114 61.4
Migut.J01046 Erythranthe guttata HOM05D003488 ORTHO05D004214 5.1e-36 154.5 112 61.6
CAN.G1039.14 Capsicum annuum HOM05D003488 ORTHO05D004214 6.6e-36 154.1 114 61.4
MELO3C024542.2 Cucumis melo HOM05D003488 ORTHO05D004214 6.6e-36 154.1 114 61.4
Duzib168G1363 Durio zibethinus HOM05D003488 ORTHO05D004214 1.1e-35 153.3 114 61.4
Lsat_1_v5_gn_8_76881 Lactuca sativa HOM05D003488 ORTHO05D004214 1.1e-35 153.3 114 60.5
Lalb_Chr01g0004851 Lupinus albus HOM05D003488 ORTHO05D004214 1.1e-35 153.3 110 63.6
Potri.004G203300 Populus trichocarpa HOM05D003488 ORTHO05D004214 1.1e-35 153.3 114 62.3
Glyma.12G088900 Glycine max HOM05D003488 ORTHO05D004214 1.5e-35 152.9 114 61.4
Manes.04G004000 Manihot esculenta HOM05D003488 ORTHO05D004214 1.5e-35 152.9 114 62.3
arahy.Tifrunner.gnm1.ann1.Q9WWUM Arachis hypogaea HOM05D003488 ORTHO05D004214 2.5e-35 152.1 114 60.5
Lj3A997T49 Lonicera japonica HOM05D003488 ORTHO05D004214 2.5e-35 152.1 114 60.5
Nitab4.5_0000963g0070 Nicotiana tabacum HOM05D003488 ORTHO05D004214 2.5e-35 152.1 112 59.8
CSS0032778 Camellia sinensis var. sinensis HOM05D003488 ORTHO05D004214 3.3e-35 151.8 114 61.4
Gohir.D07G113900 Gossypium hirsutum HOM05D003488 ORTHO05D004214 3.3e-35 151.8 114 61.4
Gorai.001G122200 Gossypium raimondii HOM05D003488 ORTHO05D004214 3.3e-35 151.8 114 61.4
Glyma.11G183600 Glycine max HOM05D003488 ORTHO05D004214 4.3e-35 151.4 114 60.5
Gohir.A07G110300 Gossypium hirsutum HOM05D003488 ORTHO05D004214 4.3e-35 151.4 114 61.4
Nitab4.5_0001725g0160 Nicotiana tabacum HOM05D003488 ORTHO05D004214 4.3e-35 151.4 114 61.4
Peaxi162Scf00163g00052 Petunia axillaris HOM05D003488 ORTHO05D004214 4.3e-35 151.4 114 58.8
Psat0s2993g0200 Pisum sativum HOM05D003488 ORTHO05D004214 4.3e-35 151.4 114 62.3
arahy.Tifrunner.gnm1.ann1.0J6PHG Arachis hypogaea HOM05D003488 ORTHO05D004214 5.6e-35 151.0 114 59.6
Thecc.09G284200 Theobroma cacao HOM05D003488 ORTHO05D004214 5.6e-35 151.0 114 62.3
Prupe.6G129400 Prunus persica HOM05D003488 ORTHO05D004214 7.3e-35 150.6 114 63.2
Actinidia31274 Actinidia chinensis HOM05D003488 ORTHO05D004214 9.5e-35 150.2 114 60.5
Lalb_Chr02g0154961 Lupinus albus HOM05D003488 ORTHO05D004214 9.5e-35 150.2 114 60.5
SGA_v2.0_scaffold13G06728 Striga asiatica HOM05D003488 ORTHO05D004214 9.5e-35 150.2 114 61.4
TPR.G21934 Trifolium pratense HOM05D003488 ORTHO05D004214 9.5e-35 150.2 114 61.4
ECA236G1444 Erigeron canadensis HOM05D003488 ORTHO05D004214 1.2e-34 149.8 114 58.8
Medtr4g053260 Medicago truncatula HOM05D003488 ORTHO05D004214 1.6e-34 149.4 114 62.3
Nitab4.5_0000132g0010 Nicotiana tabacum HOM05D003488 ORTHO05D004214 1.6e-34 149.4 114 57.9
Ca_19405_v3 Cicer arietinum L. HOM05D003488 ORTHO05D004214 2.1e-34 149.1 114 60.5
Hma1.2p1_0084F.1_g043700 Hydrangea macrophylla HOM05D003488 ORTHO05D004214 2.8e-34 148.7 114 61.4
Manes.11G161600 Manihot esculenta HOM05D003488 ORTHO05D004214 2.8e-34 148.7 110 62.7
PGSC0003DMG403002701 Solanum tuberosum HOM05D003488 ORTHO05D004214 2.8e-34 148.7 114 59.6
Psat4g110920 Pisum sativum HOM05D003488 ORTHO05D004214 3.6e-34 148.3 114 61.4
TPR.G17200 Trifolium pratense HOM05D003488 ORTHO05D004214 3.6e-34 148.3 114 61.4
Nitab4.5_0005483g0030 Nicotiana tabacum HOM05D003488 ORTHO05D004214 4.7e-34 147.9 114 59.6
Solyc09g009470.1 Solanum lycopersicum HOM05D003488 ORTHO05D004214 4.7e-34 147.9 114 58.8
Haze_19602 Corylus avellana HOM05D003488 ORTHO05D004214 6.2e-34 147.5 114 59.6
MD14G1022200 Malus domestica HOM05D003488 ORTHO05D004214 6.2e-34 147.5 114 61.4
Rhsim03G0075900 Rhododendron simsii HOM05D003488 ORTHO05D004214 6.2e-34 147.5 114 58.8
Psat6g013800 Pisum sativum HOM05D003488 ORTHO05D004214 8.1e-34 147.1 114 60.5
VMungo1127G1058 Vigna mungo HOM05D003488 ORTHO05D004214 8.1e-34 147.1 114 57.0
Medtr1g060040 Medicago truncatula HOM05D003488 ORTHO05D004214 1.1e-33 146.7 114 57.0
Oeu009221.1 Olea europaea HOM05D003488 ORTHO05D004214 1.1e-33 146.7 114 58.8
Prupe.7G111200 Prunus persica HOM05D003488 ORTHO05D004214 1.1e-33 146.7 114 62.3
CAN.G397.11 Capsicum annuum HOM05D003488 ORTHO05D004214 1.4e-33 146.4 114 58.8
Cfa016600 Carpinus fangiana HOM05D003488 ORTHO05D004214 1.4e-33 146.4 114 60.5
Sopen09g004200 Solanum pennellii HOM05D003488 ORTHO05D004214 1.4e-33 146.4 114 58.8
Zm00001eb147200 Zea mays HOM05D003488 ORTHO05D004214 1.4e-33 146.4 114 61.4
Ca_08884_v3 Cicer arietinum L. HOM05D003488 ORTHO05D004214 1.8e-33 146.0 114 59.6
Manes.09G056000 Manihot esculenta HOM05D003488 ORTHO05D004214 1.8e-33 146.0 114 59.6
Os01g0859600 Oryza sativa ssp. japonica HOM05D003488 ORTHO05D004214 2.3e-33 145.6 114 61.4
AUR62006173 Chenopodium quinoa HOM05D003488 ORTHO05D004214 4.0e-33 144.8 114 62.3
AUR62028536 Chenopodium quinoa HOM05D003488 ORTHO05D004214 4.0e-33 144.8 114 63.2
Lj3g0011633 Lotus japonicus HOM05D003488 ORTHO05D004214 4.0e-33 144.8 114 57.9
AUR62021589 Chenopodium quinoa HOM05D003488 ORTHO05D004214 5.2e-33 144.4 114 62.3
BolC6t39128H Brassica oleracea HOM05D003488 ORTHO05D004214 6.8e-33 144.1 114 60.5
FvH4_6g18580 Fragaria vesca HOM05D003488 ORTHO05D004214 6.8e-33 144.1 114 57.0
FAN05G0207 Fragaria x ananassa HOM05D003488 ORTHO05D004214 6.8e-33 144.1 114 57.0
FAN05G2045 Fragaria x ananassa HOM05D003488 ORTHO05D004214 6.8e-33 144.1 114 57.0
FAN09G1414 Fragaria x ananassa HOM05D003488 ORTHO05D004214 6.8e-33 144.1 114 57.0
BcaB03g15209 Brassica carinata HOM05D003488 ORTHO05D004214 8.9e-33 143.7 114 60.5
Thhalv10018615m.g Eutrema salsugineum HOM05D003488 ORTHO05D004214 8.9e-33 143.7 114 60.5
RcHm_v2.0_Chr3g0473131 Rosa chinensis HOM05D003488 ORTHO05D004214 8.9e-33 143.7 114 57.0
PGR004G0231 Punica granatum HOM05D003488 ORTHO05D004214 1.2e-32 143.3 114 57.9
MSTRG.5840 Avicennia marina HOM05D003488 ORTHO05D004214 1.5e-32 142.9 114 57.0
BcaC08g46148 Brassica carinata HOM05D003488 ORTHO05D004214 2.0e-32 142.5 114 59.6
C06p43110 Brassica napus HOM05D003488 ORTHO05D004214 2.0e-32 142.5 114 59.6
BraA07t31008Z Brassica rapa HOM05D003488 ORTHO05D004214 2.0e-32 142.5 114 59.6
CARHR059640 Cardamine hirsuta HOM05D003488 ORTHO05D004214 2.0e-32 142.5 114 59.6
Glyma.19G194600 Glycine max HOM05D003488 ORTHO05D004214 2.6e-32 142.1 114 57.9
GSVIVG01036133001 Vitis vinifera HOM05D003488 ORTHO05D004214 2.6e-32 142.1 114 59.6
VMungo1383G0237 Vigna mungo HOM05D003488 ORTHO05D004214 4.4e-32 141.4 114 57.0
HanXRQChr13g0397431 Helianthus annuus HOM05D003488 ORTHO05D004214 5.8e-32 141.0 118 57.6
THA.LOC104800533 Tarenaya hassleriana HOM05D003488 ORTHO05D004214 5.8e-32 141.0 115 59.1
EL10Ac7g16924 Beta vulgaris HOM05D003488 ORTHO05D004214 9.9e-32 140.2 114 58.8
A07p33820 Brassica napus HOM05D003488 ORTHO05D004214 9.9e-32 140.2 114 58.8
AL2G25690 Arabidopsis lyrata HOM05D003488 ORTHO05D004214 1.7e-31 139.4 114 58.8
AT1G67190 Arabidopsis thaliana HOM05D003488 ORTHO05D004214 1.7e-31 139.4 114 58.8
Carub.0002s1346 Capsella rubella HOM05D003488 ORTHO05D004214 2.9e-31 138.7 114 58.8
ClCG04G010010 Citrullus lanatus HOM05D003488 ORTHO05D004214 3.8e-31 138.3 117 56.4
Ah.15g095780 Amaranthus hybridus HOM05D003488 ORTHO05D004214 6.4e-31 137.5 108 58.3
Medtr7g104490 Medicago truncatula HOM05D003488 ORTHO05D004214 8.4e-31 137.1 114 51.8
Pp3c25_4500 Physcomitrium patens HOM05D003488 ORTHO05D004214 8.4e-31 137.1 112 56.2
Cc06_g05690 Coffea canephora HOM05D003488 ORTHO05D004214 1.1e-30 136.7 114 55.3
Sp5g22120 Schrenkiella parvula HOM05D003488 ORTHO05D004214 1.1e-30 136.7 114 57.9
Hund18755 Selenicereus undatus HOM05D003488 ORTHO05D004214 1.1e-30 136.7 105 60.0
arahy.Tifrunner.gnm1.ann1.D6PK9F Arachis hypogaea HOM05D003488 ORTHO05D004214 1.9e-30 136.0 110 57.3
AUR62009763 Chenopodium quinoa HOM05D003488 ORTHO05D004214 1.9e-30 136.0 102 62.7
HPP92_003226 Vanilla planifolia HOM05D003488 ORTHO05D004214 1.9e-30 136.0 114 56.1
CANSAT54G1372 Cannabis sativa HOM05D003488 ORTHO05D004214 5.4e-30 134.4 114 56.1
Sc12g0004500 Simmondsia chinensis HOM05D003488 ORTHO05D004214 5.4e-30 134.4 114 53.5
HanXRQChr02g0054781 Helianthus annuus HOM05D003488 ORTHO05D004214 7.1e-30 134.0 118 57.6
Lsat_1_v5_gn_6_38721 Lactuca sativa HOM05D003488 ORTHO05D004214 1.2e-29 133.3 118 57.6
CDE08G1419 Ceratophyllum demersum HOM05D003488 ORTHO05D004214 2.1e-29 132.5 118 56.8
Psat3g033640 Pisum sativum HOM05D003488 ORTHO05D004214 2.7e-29 132.1 114 50.9
TPR.G19554 Trifolium pratense HOM05D003488 ORTHO05D004214 1.3e-28 129.8 114 51.8
CiPaw.13G136100 Carya illinoinensis HOM05D003488 ORTHO05D004214 5.1e-28 127.9 114 57.0
Ca_08999_v3 Cicer arietinum L. HOM05D003488 ORTHO05D004214 1.1e-27 126.7 114 50.9
TPR.G11390 Trifolium pratense HOM05D003488 ORTHO05D004214 1.5e-27 126.3 114 49.1
Sc20g0006250 Simmondsia chinensis HOM05D003488 ORTHO05D004214 3.3e-27 125.2 112 53.6
Nitab4.5_0000202g0240 Nicotiana tabacum HOM05D003488 ORTHO05D004214 4.3e-27 124.8 112 53.6
Eucgr.B03854 Eucalyptus grandis HOM05D003488 ORTHO05D004214 6.2e-26 120.9 114 50.0
Dinv29477 Davidia involucrata HOM05D003488 ORTHO05D004214 1.1e-25 120.2 114 52.6
Eucgr.A01498 Eucalyptus grandis HOM05D003488 ORTHO05D004214 1.4e-25 119.8 104 57.7
Ah.15g090910 Amaranthus hybridus HOM05D003488 ORTHO05D004214 2.4e-25 119.0 132 48.5
CiPaw.13G136000 Carya illinoinensis HOM05D003488 ORTHO05D004214 2.4e-25 119.0 116 50.9
Aa31LG2G3560 Aethionema arabicum HOM05D003488 ORTHO05D004214 5.2e-25 117.9 114 51.8
AUR62036179 Chenopodium quinoa HOM05D003488 ORTHO05D022332 5.2e-25 117.9 92 57.6
Mapoly0037s0051 Marchantia polymorpha HOM05D003488 ORTHO05D004214 8.9e-25 117.1 116 49.1
CsaV3_3G037230 Cucumis sativus L. HOM05D003488 ORTHO05D022332 2.9e-23 112.1 114 47.4
THA.LOC104815726 Tarenaya hassleriana HOM05D003488 ORTHO05D004214 1.1e-22 110.2 114 49.1
PGR102G1638 Punica granatum HOM05D003488 ORTHO05D004214 2.4e-22 109.0 114 50.9
CiPaw.13G136300 Carya illinoinensis HOM05D003488 ORTHO05D004214 2.7e-21 105.5 114 44.7
TPR.G38236 Trifolium pratense HOM05D003488 ORTHO05D004214 7.8e-21 104.0 112 47.3
ECA233G3236 Erigeron canadensis HOM05D003488 ORTHO05D004214 1.0e-20 103.6 109 48.6
Phvul.001G189500 Phaseolus vulgaris HOM05D003488 ORTHO05D004214 3.6e-18 95.1 124 43.5
TAR636G2058 Trochodendron aralioides HOM05D000382 ORTHO05D000391 9.0e-17 90.5 81 54.3
CiPaw.14G100300 Carya illinoinensis HOM05D003488 ORTHO05D004214 1.5e-16 89.7 105 43.8
SalBow3G3938 Salvia bowleyana HOM05D003488 ORTHO05D004214 5.8e-16 87.8 96 47.9
GSVIVG01033833001 Vitis vinifera HOM05D003488 ORTHO05D004214 5.8e-16 87.8 114 41.2
PGR102G1861 Punica granatum HOM05D003488 ORTHO05D004214 7.6e-16 87.4 116 44.0
FAN14G3815 Fragaria x ananassa HOM05D003488 ORTHO05D004214 2.9e-15 85.5 108 39.8
CDE06G0950 Ceratophyllum demersum HOM05D003488 ORTHO05D004214 1.6e-13 79.7 71 54.9
AagrBONN_evm.TU.Sc2ySwM_368.174 Anthoceros agrestis HOM05D003488 ORTHO05D004214 1.3e-12 76.6 114 36.8
SalBow5G1330 Salvia bowleyana HOM05D003488 ORTHO05D004214 1.6e-10 69.7 67 53.7
Nitab4.5_0001216g0070 Nicotiana tabacum HOM05D003488 ORTHO05D285644 5.8e-08 61.2 63 42.9
Psat0s2993g0080 Pisum sativum HOM05D003488 ORTHO05D022332 3.8e-07 58.5 42 66.7
Lalb_Chr19g0136491 Lupinus albus HOM05D003488 ORTHO05D022332 1.4e-06 56.6 35 71.4


User provided reference genes

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