Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 1.6e-92 342.8 180 100.0
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 1.4e-59 233.4 170 75.3
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 4.4e-58 228.4 175 70.9
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 1.1e-56 223.8 175 70.3
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 4.1e-56 221.9 175 68.0
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 6.9e-56 221.1 175 68.0
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 6.9e-56 221.1 175 68.0
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 5.9e-55 218.0 168 70.2
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 5.9e-55 218.0 174 70.1
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 1.0e-54 217.2 175 67.4
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.7e-54 216.5 169 69.2
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 1.7e-54 216.5 174 69.0
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 2.9e-54 215.7 175 68.0
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 3.8e-54 215.3 175 66.9
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 5.0e-54 214.9 168 69.6
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 6.5e-54 214.5 168 69.6
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 1.1e-53 213.8 168 67.3
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 1.4e-53 213.4 169 70.4
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 1.4e-53 213.4 178 66.3
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 3.2e-53 212.2 168 68.5
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 3.2e-53 212.2 175 65.1
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 4.2e-53 211.8 173 65.9
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 4.2e-53 211.8 175 66.3
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 5.5e-53 211.5 175 67.4
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 5.5e-53 211.5 176 65.9
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 2.1e-52 209.5 174 66.7
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 2.7e-52 209.1 175 66.3
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 2.7e-52 209.1 176 65.3
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 2.7e-52 209.1 176 65.3
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 4.7e-52 208.4 168 65.5
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 4.7e-52 208.4 176 64.8
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 4.7e-52 208.4 175 66.3
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 7.9e-52 207.6 169 67.5
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 1.0e-51 207.2 171 64.9
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 1.4e-51 206.8 177 64.4
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 3.9e-51 205.3 169 65.7
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 6.7e-51 204.5 179 65.4
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 6.7e-51 204.5 171 64.3
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 8.8e-51 204.1 180 65.6
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 1.1e-50 203.8 170 62.4
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 1.1e-50 203.8 171 63.7
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 1.1e-50 203.8 171 63.7
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 2.6e-50 202.6 174 63.8
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 4.4e-50 201.8 174 64.4
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 4.4e-50 201.8 172 65.7
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 5.7e-50 201.4 171 63.7
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.3e-49 200.3 177 62.1
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 2.2e-49 199.5 169 64.5
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 1.1e-48 197.2 173 61.3
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 1.4e-48 196.8 173 62.4
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 2.4e-48 196.1 176 60.2
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 3.1e-48 195.7 176 60.2
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 4.1e-48 195.3 170 61.8
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 7.0e-48 194.5 178 61.2
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 1.6e-47 193.4 174 60.3
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 2.0e-47 193.0 176 59.7
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 2.0e-47 193.0 171 61.4
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.6e-47 192.6 171 61.4
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.6e-47 192.6 171 61.4
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 2.6e-47 192.6 175 60.0
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.5e-47 192.2 171 61.4
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 5.9e-47 191.4 176 59.1
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 5.9e-47 191.4 168 60.7
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 5.9e-47 191.4 173 59.5
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 5.9e-47 191.4 173 59.5
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 7.7e-47 191.0 175 60.6
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 1.0e-46 190.7 173 62.4
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 1.3e-46 190.3 173 59.5
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.3e-46 190.3 174 62.6
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 1.7e-46 189.9 173 59.0
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 1.7e-46 189.9 173 59.0
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.7e-46 189.9 173 60.1
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 3.8e-46 188.7 170 60.6
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 6.5e-46 188.0 173 58.4
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 1.9e-45 186.4 175 57.7
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 2.5e-45 186.0 172 58.1
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 3.2e-45 185.7 147 66.0
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 3.2e-45 185.7 175 60.6
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 4.2e-45 185.3 172 62.2
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 5.5e-45 184.9 171 60.2
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 7.2e-45 184.5 176 58.5
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 7.2e-45 184.5 175 58.3
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.2e-44 183.7 175 58.3
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 1.6e-44 183.3 175 61.7
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 3.6e-44 182.2 178 57.9
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 4.7e-44 181.8 171 59.1
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 6.1e-44 181.4 176 56.8
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 1.4e-43 180.3 174 58.6
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 2.3e-43 179.5 172 57.6
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 1.2e-42 177.2 173 56.6
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 1.2e-42 177.2 171 57.3
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 1.2e-42 177.2 171 57.3
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 1.5e-42 176.8 172 58.1
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 1.5e-42 176.8 172 58.1
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 1.7e-41 173.3 172 58.1
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 3.7e-41 172.2 175 55.4
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 3.7e-41 172.2 177 55.9
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 8.2e-41 171.0 174 59.2
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 1.4e-40 170.2 173 55.5
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 5.3e-40 168.3 176 53.4
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 9.1e-40 167.5 175 53.1
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 9.1e-40 167.5 169 53.8
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 2.0e-39 166.4 138 63.0
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 3.5e-39 165.6 175 54.3
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 1.0e-38 164.1 175 54.9
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 1.3e-38 163.7 165 57.0
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 3.8e-38 162.2 174 56.3
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 6.5e-38 161.4 117 70.9
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 8.5e-38 161.0 117 70.1
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 5.5e-37 158.3 176 54.5
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 7.2e-37 157.9 176 51.1
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 2.1e-36 156.4 165 54.5
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 3.6e-36 155.6 121 66.1
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 8.0e-36 154.5 183 49.7
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 9.8e-34 147.5 117 65.0
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 1.7e-33 146.7 191 46.6
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 2.2e-33 146.4 186 46.8
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 2.8e-33 146.0 114 66.7
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.1e-32 144.1 171 49.7
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 1.1e-32 144.1 171 50.9
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 1.1e-32 144.1 171 50.9
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 1.4e-32 143.7 177 51.4
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 3.1e-32 142.5 171 50.9
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 1.5e-29 133.7 181 47.5
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 2.3e-27 126.3 114 60.5
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 9.8e-26 120.9 91 69.2
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 3.7e-25 119.0 99 65.7
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 6.3e-25 118.2 96 61.5
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 3.5e-23 112.5 164 45.1
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 1.3e-22 110.5 106 59.4
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.7e-22 110.2 128 53.1
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 1.5e-21 107.1 97 59.8
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.3e-21 105.9 106 54.7
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 9.5e-21 104.4 83 66.3
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 8.0e-20 101.3 73 68.5
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 8.0e-20 101.3 73 68.5
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 9.8e-18 94.4 79 62.0
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 2.2e-17 93.2 96 57.3
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 3.7e-17 92.4 72 66.7
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 7.0e-16 88.2 115 50.4
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 9.2e-16 87.8 118 44.1
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 1.2e-15 87.4 89 55.1
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 1.6e-15 87.0 151 43.7
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.7e-14 83.6 53 77.4
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 1.5e-10 70.5 57 64.9
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 2.0e-10 70.1 170 38.2
arahy.Tifrunner.gnm1.ann1.K04YXN Arachis hypogaea HOM05D002737 ORTHO05D023756 2.6e-10 69.7 90 48.9
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.4e-08 63.9 55 60.0


User provided reference genes

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