Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.6e-123 444.9 222 100.0
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.2e-22 110.9 206 33.0
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 2.9e-19 99.8 209 33.0
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 3.2e-18 96.3 201 34.3
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 2.7e-17 93.2 195 32.3
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 1.0e-16 91.3 205 31.2
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 1.3e-16 90.9 201 30.8
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 8.7e-16 88.2 197 29.4
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 8.7e-16 88.2 197 29.4
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.5e-15 87.4 197 29.4
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 1.9e-15 87.0 197 29.4
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.9e-15 87.0 197 29.4
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 5.6e-15 85.5 197 30.5
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 7.3e-15 85.1 201 32.8
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 1.3e-14 84.3 201 31.8
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 2.1e-14 83.6 206 32.0
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 3.6e-14 82.8 201 30.8
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 6.2e-14 82.0 208 30.3
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 3.1e-13 79.7 201 29.4
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 6.9e-13 78.6 207 29.5
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 6.9e-13 78.6 205 27.8
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 6.9e-13 78.6 198 29.3
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 6.9e-13 78.6 198 29.3
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 2.6e-12 76.6 201 29.9
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 3.4e-12 76.3 205 28.8
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 7.6e-12 75.1 202 30.7
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 1.3e-11 74.3 205 29.3
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 1.3e-11 74.3 187 28.9
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.7e-11 73.9 205 29.3
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 2.9e-11 73.2 204 26.5
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.9e-11 73.2 174 29.9
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 4.9e-11 72.4 200 30.0
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 8.4e-11 71.6 197 29.9
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 1.1e-10 71.2 198 28.8
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.4e-10 70.9 205 25.9
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 1.4e-10 70.9 191 28.3
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 3.2e-10 69.7 205 27.8
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.2e-10 69.7 194 29.9
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 4.2e-10 69.3 194 29.4
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 4.2e-10 69.3 198 27.3
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 5.4e-10 68.9 194 29.9
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 5.4e-10 68.9 204 27.0
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 9.3e-10 68.2 199 28.6
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 9.3e-10 68.2 206 26.2
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 1.2e-09 67.8 204 27.0
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 1.2e-09 67.8 194 30.9
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 1.6e-09 67.4 198 28.3
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 3.5e-09 66.2 190 30.0
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 3.5e-09 66.2 200 28.0
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 6.0e-09 65.5 204 26.5
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 6.0e-09 65.5 199 28.6
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 6.0e-09 65.5 193 31.1
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 6.0e-09 65.5 191 27.7
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 7.9e-09 65.1 205 25.4
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 7.9e-09 65.1 201 26.4
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 1.0e-08 64.7 195 29.7
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 1.0e-08 64.7 205 25.4
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.8e-08 63.9 204 26.0
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.8e-08 63.9 205 26.8
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.8e-08 63.9 221 29.4
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.8e-08 63.9 221 29.4
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 1.8e-08 63.9 198 27.8
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 2.3e-08 63.5 60 50.0
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 2.3e-08 63.5 203 28.1
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 3.0e-08 63.2 202 27.2
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 3.0e-08 63.2 202 27.2
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 3.9e-08 62.8 194 28.9
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 5.1e-08 62.4 192 28.6
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 6.7e-08 62.0 206 30.1
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 8.7e-08 61.6 202 27.7
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 8.7e-08 61.6 205 27.3
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 1.1e-07 61.2 196 28.1
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 1.9e-07 60.5 191 27.7
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 3.3e-07 59.7 191 25.1
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 7.4e-07 58.5 192 26.6
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 7.4e-07 58.5 202 26.2
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 7.4e-07 58.5 192 28.6
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 9.6e-07 58.2 192 27.1
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 3.6e-06 56.2 201 26.4
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 4.8e-06 55.8 206 28.6
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 6.2e-06 55.5 199 28.1


User provided reference genes

Program Settings