Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 1.1e-181 639.8 322 100.0
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 9.7e-93 344.4 288 60.8
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 1.6e-90 337.0 289 61.2
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 6.5e-89 331.6 298 60.1
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 8.5e-89 331.3 307 57.7
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 1.1e-88 330.9 287 61.7
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 1.5e-88 330.5 290 59.7
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.9e-88 330.1 293 59.7
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 5.5e-88 328.6 287 58.9
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 1.2e-87 327.4 285 59.3
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 1.6e-87 327.0 287 62.0
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 1.6e-87 327.0 294 60.2
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 2.1e-87 326.6 294 58.8
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 4.7e-87 325.5 287 61.7
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 1.4e-86 323.9 287 58.9
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 2.3e-86 323.2 307 57.0
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 3.0e-86 322.8 288 57.3
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 4.0e-86 322.4 307 56.0
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 6.8e-86 321.6 286 60.1
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 6.8e-86 321.6 290 57.9
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 8.8e-86 321.2 290 59.7
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 1.2e-85 320.9 287 57.8
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 1.2e-85 320.9 291 59.5
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 2.0e-85 320.1 284 60.2
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 2.6e-85 319.7 306 55.2
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 2.6e-85 319.7 287 59.9
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 7.5e-85 318.2 307 56.4
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 1.7e-84 317.0 288 57.6
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 3.7e-84 315.8 287 57.1
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 3.7e-84 315.8 294 56.8
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 8.3e-84 314.7 288 59.4
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 1.4e-83 313.9 287 56.8
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 1.4e-83 313.9 287 58.9
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 1.8e-83 313.5 291 57.4
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.8e-83 313.5 287 58.5
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 2.4e-83 313.2 288 58.3
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 2.4e-83 313.2 287 59.2
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 2.4e-83 313.2 306 54.9
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 2.4e-83 313.2 287 59.9
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 5.4e-83 312.0 322 53.4
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 5.4e-83 312.0 288 56.9
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 9.1e-83 311.2 288 56.9
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 9.1e-83 311.2 287 58.2
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 9.1e-83 311.2 308 55.2
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 1.2e-82 310.8 296 57.1
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 1.6e-82 310.5 297 56.2
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 2.0e-82 310.1 287 57.8
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 2.7e-82 309.7 287 59.2
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 3.5e-82 309.3 287 56.4
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 3.5e-82 309.3 287 58.2
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 3.5e-82 309.3 287 57.8
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 3.5e-82 309.3 294 55.8
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 5.9e-82 308.5 287 56.8
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 1.0e-81 307.8 287 57.5
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 1.3e-81 307.4 287 58.2
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 5.0e-81 305.4 287 57.1
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 6.5e-81 305.1 283 56.9
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 8.5e-81 304.7 287 56.4
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 8.5e-81 304.7 287 57.5
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.9e-80 303.5 287 57.5
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 2.5e-80 303.1 287 56.4
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 2.5e-80 303.1 287 56.8
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 3.2e-80 302.8 287 57.5
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 4.2e-80 302.4 297 55.9
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 9.4e-80 301.2 287 57.1
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 1.2e-79 300.8 312 51.9
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 2.1e-79 300.1 298 55.7
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 4.7e-79 298.9 288 56.9
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 1.4e-78 297.4 292 56.2
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 1.8e-78 297.0 288 55.6
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 2.3e-78 296.6 292 54.5
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 4.0e-78 295.8 291 55.7
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 4.0e-78 295.8 312 52.9
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 5.2e-78 295.4 283 55.5
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 8.8e-78 294.7 274 58.8
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 3.4e-77 292.7 294 52.4
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 5.7e-77 292.0 312 52.2
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 1.7e-76 290.4 253 60.1
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 1.1e-75 287.7 283 55.1
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.7e-74 283.1 299 50.5
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 3.8e-73 279.3 364 44.5
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 8.6e-73 278.1 284 54.2
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 1.8e-70 270.4 290 52.8
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 5.2e-70 268.9 283 51.9
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 1.2e-69 267.7 297 52.5
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 1.5e-69 267.3 291 52.6
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 7.5e-69 265.0 287 53.3
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 9.8e-69 264.6 284 52.5
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 1.7e-68 263.8 284 52.1
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 2.0e-66 256.9 312 48.1
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 4.6e-66 255.8 256 54.7
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 7.8e-66 255.0 292 49.7
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 3.3e-64 249.6 286 49.3
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 6.2e-63 245.4 213 60.6
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 4.4e-61 239.2 303 44.9
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 8.3e-60 235.0 280 48.2
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 8.6e-57 224.9 204 57.8
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 5.1e-49 199.1 293 40.3
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.2e-47 194.5 287 42.9
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 3.6e-47 193.0 287 42.5
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.1e-46 191.4 157 59.9
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 2.0e-45 187.2 154 63.0
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 2.2e-44 183.7 301 39.2
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 4.9e-44 182.6 150 60.7
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 5.4e-43 179.1 151 60.9
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 3.0e-41 173.3 263 41.4
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 3.6e-39 166.4 237 43.5
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.4e-35 154.5 122 64.8
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 2.7e-34 150.2 136 59.6
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 6.0e-34 149.1 294 35.0
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 4.3e-32 142.9 140 53.6
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.6e-26 124.4 113 57.5
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-24 118.2 105 59.0
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-24 118.2 105 59.0
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 9.6e-24 115.2 92 62.0
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 1.4e-19 101.3 85 58.8
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 1.9e-16 90.9 234 30.3
Lsat_1_v5_gn_3_107600 Lactuca sativa HOM05D000629 ORTHO05D013393 8.7e-09 65.5 74 45.9
PSO478G1928 Papaver somniferum HOM05D005625 ORTHO05D002418 1.1e-06 58.5 86 41.9
Cfa026593 Carpinus fangiana HOM05D005625 ORTHO05D007564 6.9e-06 55.8 253 25.3


User provided reference genes

Program Settings