Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 2.1e-266 921.8 450 100.0
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 1.1e-198 696.8 447 72.7
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 2.0e-197 692.6 453 72.2
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 3.5e-197 691.8 450 72.7
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 3.8e-196 688.3 449 70.8
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 3.8e-196 688.3 457 71.1
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 3.8e-196 688.3 450 71.6
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 8.6e-196 687.2 449 72.4
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 1.1e-195 686.8 450 71.3
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 1.5e-195 686.4 457 70.9
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 7.2e-195 684.1 449 71.3
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 7.2e-195 684.1 452 71.9
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 9.5e-195 683.7 452 71.0
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.2e-194 683.3 449 71.3
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 2.1e-194 682.6 449 70.8
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 2.1e-194 682.6 450 71.1
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 2.8e-194 682.2 450 71.6
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 2.8e-194 682.2 460 70.9
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 4.7e-194 681.4 449 71.0
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 4.7e-194 681.4 451 71.2
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 6.1e-194 681.0 450 71.3
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 8.0e-194 680.6 452 70.6
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 1.0e-193 680.2 451 71.2
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.0e-193 680.2 450 70.4
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 2.3e-193 679.1 450 71.1
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 2.3e-193 679.1 450 71.1
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 3.0e-193 678.7 458 70.5
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 3.0e-193 678.7 450 71.8
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 5.2e-193 677.9 450 71.1
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.8e-193 677.6 450 71.1
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 2.0e-192 676.0 449 71.0
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 2.6e-192 675.6 447 69.8
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 2.6e-192 675.6 449 69.5
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 5.7e-192 674.5 449 72.2
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 9.8e-192 673.7 450 70.2
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 1.3e-191 673.3 446 69.1
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.7e-191 672.9 458 70.1
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 1.7e-191 672.9 458 69.7
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 2.2e-191 672.5 449 70.6
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 2.8e-191 672.2 450 70.2
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 2.8e-191 672.2 450 70.9
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 3.7e-191 671.8 449 71.0
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 3.7e-191 671.8 449 69.0
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 3.7e-191 671.8 451 70.5
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 6.3e-191 671.0 450 68.4
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 1.4e-190 669.8 449 69.0
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 1.4e-190 669.8 450 68.7
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 2.4e-190 669.1 450 69.1
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 2.4e-190 669.1 449 70.2
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 4.1e-190 668.3 449 68.6
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 4.1e-190 668.3 454 69.4
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 4.1e-190 668.3 450 70.0
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 7.0e-190 667.5 450 69.8
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 9.2e-190 667.2 450 69.1
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 1.2e-189 666.8 449 69.3
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 1.6e-189 666.4 449 67.9
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 2.0e-189 666.0 462 68.6
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 2.0e-189 666.0 450 69.6
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 2.0e-189 666.0 450 68.0
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 2.0e-189 666.0 449 68.6
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.7e-189 665.6 450 70.4
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 2.7e-189 665.6 455 68.6
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.5e-189 665.2 450 70.0
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 3.5e-189 665.2 450 69.6
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 4.5e-189 664.8 450 69.1
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 4.5e-189 664.8 450 67.8
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 5.9e-189 664.5 449 69.0
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 7.8e-189 664.1 451 70.1
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 1.0e-188 663.7 499 64.5
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 1.3e-188 663.3 449 68.4
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 1.3e-188 663.3 449 69.0
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.9e-188 662.1 450 70.0
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 6.6e-188 661.0 449 69.3
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 6.6e-188 661.0 450 68.0
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 8.6e-188 660.6 449 68.6
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 1.5e-187 659.8 449 69.0
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 1.5e-187 659.8 449 69.0
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 1.9e-187 659.4 450 69.1
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 3.3e-187 658.7 430 72.3
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 4.3e-187 658.3 450 68.4
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 5.6e-187 657.9 452 68.6
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 7.3e-187 657.5 450 68.4
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 9.5e-187 657.1 436 70.4
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 1.6e-186 656.4 481 65.1
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 1.6e-186 656.4 451 68.5
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 2.8e-186 655.6 449 68.4
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 3.6e-186 655.2 455 68.6
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 1.4e-185 653.3 448 69.6
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 1.4e-185 653.3 449 68.2
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 1.8e-185 652.9 452 67.5
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 2.3e-185 652.5 455 68.6
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 4.0e-185 651.7 449 68.2
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 5.2e-185 651.4 460 67.4
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 6.8e-185 651.0 461 67.7
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 8.9e-185 650.6 460 67.2
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 8.9e-185 650.6 460 67.2
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 1.2e-184 650.2 449 69.0
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 1.5e-184 649.8 458 67.5
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 1.5e-184 649.8 448 65.8
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 1.5e-184 649.8 449 67.0
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 2.0e-184 649.4 460 67.2
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 7.5e-184 647.5 449 68.2
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 2.2e-183 646.0 455 67.3
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 1.1e-182 643.7 460 67.0
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 5.4e-182 641.3 513 60.8
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 1.6e-181 639.8 458 67.7
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 2.7e-181 639.0 515 60.8
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 1.0e-180 637.1 458 67.7
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 1.9e-179 632.9 449 67.3
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 3.3e-179 632.1 441 69.6
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 1.2e-178 630.2 449 64.4
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.8e-178 629.0 455 65.7
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 3.1e-177 625.5 419 71.1
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 5.2e-177 624.8 451 66.3
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 8.9e-177 624.0 426 69.5
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 8.9e-177 624.0 450 66.9
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 1.2e-176 623.6 449 66.8
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 1.9e-174 616.3 449 65.9
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 8.6e-172 607.4 442 64.5
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 3.4e-168 595.5 451 64.1
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 9.2e-166 587.4 449 63.0
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 1.3e-164 583.6 451 62.3
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 6.6e-164 581.3 398 69.6
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 2.5e-163 579.3 397 70.5
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 5.8e-160 568.2 396 68.4
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 4.9e-159 565.1 455 61.8
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.1e-158 563.9 405 65.9
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 1.9e-158 563.1 451 61.6
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 1.1e-155 553.9 398 66.6
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 4.7e-154 548.5 410 65.4
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 6.2e-154 548.1 384 67.4
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 6.4e-151 538.1 452 59.3
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 2.1e-146 523.1 438 59.6
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.1e-146 523.1 365 69.3
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 2.4e-142 509.6 420 60.2
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 6.9e-137 491.5 401 61.1
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.7e-133 479.6 473 52.9
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 2.3e-132 476.5 479 51.8
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 9.0e-129 464.5 332 67.2
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 1.5e-128 463.8 449 53.9
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 2.6e-128 463.0 449 52.3
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 2.9e-127 459.5 377 60.2
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 4.6e-125 452.2 422 53.8
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.1e-123 447.6 341 64.8
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 3.7e-122 442.6 446 52.0
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 4.8e-122 442.2 312 66.7
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 1.5e-115 420.6 330 60.9
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 1.7e-114 417.2 415 53.5
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 2.4e-97 360.1 215 77.7
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 2.9e-87 326.6 249 59.4
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 2.2e-82 310.5 184 78.3
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 5.9e-80 302.4 219 67.1
CDE02G0373 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 3.3e-78 296.6 218 63.3
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-69 267.7 227 58.1
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 1.5e-59 234.6 163 68.7
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 4.1e-57 226.5 140 75.7
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 6.6e-55 219.2 609 27.3
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 3.7e-50 203.4 482 30.3
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 2.7e-48 197.2 443 29.3
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 5.6e-46 189.5 133 67.7
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 5.6e-46 189.5 159 56.6
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 8.1e-45 185.7 106 79.2
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 8.1e-45 185.7 132 67.4
SHI09320 Sapria himalayana HOM05D003665 ORTHO05D004387 3.1e-44 183.7 190 49.5
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.3e-42 178.3 140 62.1
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 1.2e-40 171.8 121 68.6
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 1.4e-36 158.3 160 50.6
TPR.G35439 Trifolium pratense HOM05D003665 ORTHO05D004387 9.9e-35 152.1 146 50.7
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 2.7e-32 144.1 150 50.7
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 1.8e-28 131.3 89 68.5
SHI09317 Sapria himalayana HOM05D003665 ORTHO05D004387 1.7e-26 124.8 110 56.4
TPR.G15544 Trifolium pratense HOM05D003665 ORTHO05D004387 1.2e-24 118.6 60 80.0
Ca_23093_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 3.0e-23 114.0 66 78.8
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 9.6e-22 109.0 64 76.6
VMungo0225G0001 Vigna mungo HOM05D003665 ORTHO05D004387 2.8e-21 107.5 68 73.5
VMungo1074G0001 Vigna mungo HOM05D003665 ORTHO05D004387 6.2e-21 106.3 116 50.0
SHI09315 Sapria himalayana HOM05D003665 ORTHO05D004387 1.5e-19 101.7 66 71.2
SHI09316 Sapria himalayana HOM05D003665 ORTHO05D004387 6.7e-15 86.3 70 55.7
Glyma.11G146000 Glycine max HOM05D003665 ORTHO05D004387 1.1e-14 85.5 48 79.2
BolC4t27275H Brassica oleracea HOM05D003665 ORTHO05D004387 1.0e-10 72.4 130 38.5
Lalb_Chr22g0350671 Lupinus albus HOM05D003665 ORTHO05D004387 8.4e-10 69.3 42 78.6
HanXRQChr06g0179151 Helianthus annuus HOM05D003665 ORTHO05D004387 1.1e-06 58.9 36 69.4
BraA04t17717Z Brassica rapa HOM05D003665 ORTHO05D040370 4.3e-06 57.0 64 46.9


User provided reference genes

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