Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16825 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 2.1e-258 895.2 458 100.0
MBI18_g03887_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.6e-120 437.2 266 81.6
Aqoxy5G02886 Aquilegia oxysepala HOM05D003479 ORTHO05D004659 6.6e-119 431.8 266 78.9
PSO170G1939 Papaver somniferum HOM05D003479 ORTHO05D004659 4.3e-118 429.1 266 78.2
PSO357G0518 Papaver somniferum HOM05D003479 ORTHO05D004659 9.5e-118 427.9 266 78.2
arahy.Tifrunner.gnm1.ann1.RIE5PZ Arachis hypogaea HOM05D003479 ORTHO05D004659 2.1e-117 426.8 266 78.2
Ciclev10018541m.g Citrus clementina HOM05D003479 ORTHO05D004659 2.1e-117 426.8 266 77.8
TWI14G0833 Tripterygium wilfordii HOM05D003479 ORTHO05D004659 2.1e-117 426.8 266 79.3
TAR636G1704 Trochodendron aralioides HOM05D003479 ORTHO05D004659 2.1e-117 426.8 300 71.7
arahy.Tifrunner.gnm1.ann1.37N44H Arachis hypogaea HOM05D003479 ORTHO05D004659 4.7e-117 425.6 266 78.2
Ca_10221_v3 Cicer arietinum L. HOM05D003479 ORTHO05D004659 4.7e-117 425.6 266 78.6
COL.COLO4_23088 Corchorus olitorius HOM05D003479 ORTHO05D004659 6.2e-117 425.2 267 78.7
Nn4g25261 Nelumbo nucifera HOM05D003479 ORTHO05D004659 8.1e-117 424.9 266 78.6
Glyma.03G226200 Glycine max HOM05D003479 ORTHO05D004659 1.4e-116 424.1 266 78.2
ATR0693G109 Amborella trichopoda HOM05D003479 ORTHO05D004659 1.8e-116 423.7 266 77.4
Glyma.19G223200 Glycine max HOM05D003479 ORTHO05D004659 1.8e-116 423.7 266 78.2
Glyma.20G089300 Glycine max HOM05D003479 ORTHO05D004659 1.8e-116 423.7 266 78.2
Prupe.3G000300 Prunus persica HOM05D003479 ORTHO05D004659 1.8e-116 423.7 266 78.9
TPR.G3092 Trifolium pratense HOM05D003479 ORTHO05D004659 1.8e-116 423.7 266 77.4
Gohir.D08G143700 Gossypium hirsutum HOM05D003479 ORTHO05D004659 3.1e-116 422.9 266 78.9
Lalb_Chr04g0260231 Lupinus albus HOM05D003479 ORTHO05D004659 4.0e-116 422.5 266 77.1
Thecc.01G328500 Theobroma cacao HOM05D003479 ORTHO05D004659 5.2e-116 422.2 266 79.3
Gorai.004G148300 Gossypium raimondii HOM05D003479 ORTHO05D004659 6.8e-116 421.8 266 78.6
Gohir.A08G122400 Gossypium hirsutum HOM05D003479 ORTHO05D004659 8.9e-116 421.4 266 78.2
VMungo1383G0820 Vigna mungo HOM05D003479 ORTHO05D004659 1.5e-115 420.6 266 77.4
Phvul.001G220000 Phaseolus vulgaris HOM05D003479 ORTHO05D004659 2.0e-115 420.2 266 77.8
CSS0000124 Camellia sinensis var. sinensis HOM05D003479 ORTHO05D004659 9.9e-115 417.9 266 78.2
Gohir.A08G035200 Gossypium hirsutum HOM05D003479 ORTHO05D004659 9.9e-115 417.9 266 77.8
MD17G1285800 Malus domestica HOM05D003479 ORTHO05D004659 9.9e-115 417.9 266 76.7
Actinidia06417 Actinidia chinensis HOM05D003479 ORTHO05D004659 1.7e-114 417.2 266 77.1
Duzib138G1436 Durio zibethinus HOM05D003479 ORTHO05D004659 1.7e-114 417.2 266 77.8
Gohir.D08G045766 Gossypium hirsutum HOM05D003479 ORTHO05D004659 2.2e-114 416.8 266 77.8
Solyc01g068590.4 Solanum lycopersicum HOM05D003479 ORTHO05D004659 2.2e-114 416.8 266 77.8
CiPaw.07G128000 Carya illinoinensis HOM05D003479 ORTHO05D004659 2.9e-114 416.4 266 76.3
Gorai.004G044600 Gossypium raimondii HOM05D003479 ORTHO05D004659 2.9e-114 416.4 266 77.8
Sopen01g030540 Solanum pennellii HOM05D003479 ORTHO05D004659 2.9e-114 416.4 296 72.3
FAN28G1829 Fragaria x ananassa HOM05D003479 ORTHO05D004659 3.7e-114 416.0 266 78.6
Lj5g0020342 Lotus japonicus HOM05D003479 ORTHO05D004659 3.7e-114 416.0 266 77.4
Medtr7g111030 Medicago truncatula HOM05D003479 ORTHO05D004659 3.7e-114 416.0 266 76.3
Psat3g015760 Pisum sativum HOM05D003479 ORTHO05D004659 3.7e-114 416.0 266 75.6
Dinv12068 Davidia involucrata HOM05D003479 ORTHO05D004659 4.9e-114 415.6 266 77.4
FAN19G1496 Fragaria x ananassa HOM05D003479 ORTHO05D004659 4.9e-114 415.6 266 78.6
GSVIVG01028271001 Vitis vinifera HOM05D003479 ORTHO05D004659 4.9e-114 415.6 266 77.4
Haze_05171 Corylus avellana HOM05D003479 ORTHO05D004659 6.4e-114 415.2 266 78.2
FvH4_1g26030 Fragaria vesca HOM05D003479 ORTHO05D004659 6.4e-114 415.2 266 78.6
FAN23G2105 Fragaria x ananassa HOM05D003479 ORTHO05D004659 6.4e-114 415.2 266 78.6
Medtr1g085300 Medicago truncatula HOM05D003479 ORTHO05D004659 6.4e-114 415.2 267 76.4
Psat6g157360 Pisum sativum HOM05D003479 ORTHO05D004659 6.4e-114 415.2 266 76.3
QL09p037617 Quercus lobata HOM05D003479 ORTHO05D004659 8.3e-114 414.8 266 77.1
Cfa004931 Carpinus fangiana HOM05D003479 ORTHO05D004659 1.1e-113 414.5 266 77.8
Glyma.10G140500 Glycine max HOM05D003479 ORTHO05D004659 1.1e-113 414.5 266 77.4
Gorai.007G115700 Gossypium raimondii HOM05D003479 ORTHO05D004659 1.1e-113 414.5 265 77.4
CANSAT25G3435 Cannabis sativa HOM05D003479 ORTHO05D004659 4.1e-113 412.5 266 75.9
Gohir.A11G103400 Gossypium hirsutum HOM05D003479 ORTHO05D004659 5.4e-113 412.1 265 77.0
RcHm_v2.0_Chr3g0485491 Rosa chinensis HOM05D003479 ORTHO05D004659 7.1e-113 411.8 266 78.2
QL09p037594 Quercus lobata HOM05D003479 ORTHO05D004659 1.6e-112 410.6 266 76.3
Atru.chr5.824 Acer truncatum HOM05D003479 ORTHO05D004659 2.1e-112 410.2 266 75.6
Gohir.D11G107800 Gossypium hirsutum HOM05D003479 ORTHO05D004659 2.1e-112 410.2 265 76.2
Lalb_Chr18g0046291 Lupinus albus HOM05D003479 ORTHO05D004659 2.7e-112 409.8 266 74.8
Manes.01G236800 Manihot esculenta HOM05D003479 ORTHO05D004659 2.7e-112 409.8 266 76.3
Nitab4.5_0002103g0090 Nicotiana tabacum HOM05D003479 ORTHO05D004659 6.0e-112 408.7 266 77.4
Potri.014G109900 Populus trichocarpa HOM05D003479 ORTHO05D004659 1.7e-111 407.1 266 75.6
CiPaw.08G080000 Carya illinoinensis HOM05D003479 ORTHO05D004659 2.3e-111 406.8 266 74.4
Pp3c25_5940 Physcomitrium patens HOM05D003479 ORTHO05D004659 6.6e-111 405.2 267 73.4
CARHR172360 Cardamine hirsuta HOM05D003479 ORTHO05D004659 1.1e-110 404.4 268 75.4
AT3G62010 Arabidopsis thaliana HOM05D003479 ORTHO05D004659 1.9e-110 403.7 268 75.4
Carub.0005s2876 Capsella rubella HOM05D003479 ORTHO05D004659 1.9e-110 403.7 268 75.4
THA.LOC104817410 Tarenaya hassleriana HOM05D003479 ORTHO05D004659 4.3e-110 402.5 268 73.9
THA.LOC104802111 Tarenaya hassleriana HOM05D003479 ORTHO05D004659 9.5e-110 401.4 268 73.5
Cc01_g21710 Coffea canephora HOM05D003479 ORTHO05D004659 1.6e-109 400.6 267 74.9
Thhalv10005753m.g Eutrema salsugineum HOM05D003479 ORTHO05D004659 2.8e-109 399.8 268 74.3
AL5G44630 Arabidopsis lyrata HOM05D003479 ORTHO05D004659 3.6e-109 399.4 268 74.6
Migut.D00003 Erythranthe guttata HOM05D003479 ORTHO05D004659 3.6e-109 399.4 266 72.9
Sp5g01350 Schrenkiella parvula HOM05D003479 ORTHO05D004659 3.6e-109 399.4 268 74.3
BcaC07g42626 Brassica carinata HOM05D003479 ORTHO05D004659 4.7e-109 399.1 268 73.9
CsaV3_6G000310 Cucumis sativus L. HOM05D003479 ORTHO05D004659 4.7e-109 399.1 266 74.1
Aa31LG10G15990 Aethionema arabicum HOM05D003479 ORTHO05D004659 6.2e-109 398.7 268 73.9
DCAR_018236 Daucus carota HOM05D003479 ORTHO05D004659 6.2e-109 398.7 266 73.3
BraA09t40821Z Brassica rapa HOM05D003479 ORTHO05D004659 8.1e-109 398.3 268 73.9
Os03g0586700 Oryza sativa ssp. japonica HOM05D003479 ORTHO05D004659 8.1e-109 398.3 266 73.7
Peaxi162Scf00309g00510 Petunia axillaris HOM05D003479 ORTHO05D004659 8.1e-109 398.3 266 75.6
Potri.002G184400 Populus trichocarpa HOM05D003479 ORTHO05D004659 8.1e-109 398.3 266 75.2
A09p54080 Brassica napus HOM05D003479 ORTHO05D004659 1.4e-108 397.5 268 73.5
Sed0010094 Sechium edule HOM05D003479 ORTHO05D004659 1.8e-108 397.1 266 73.7
ClCG06G004120 Citrullus lanatus HOM05D003479 ORTHO05D004659 2.4e-108 396.7 266 73.3
BcaC07g40697 Brassica carinata HOM05D003479 ORTHO05D004659 3.1e-108 396.4 268 73.5
C08p36970 Brassica napus HOM05D003479 ORTHO05D004659 3.1e-108 396.4 268 73.5
BolC8t51274H Brassica oleracea HOM05D003479 ORTHO05D004659 3.1e-108 396.4 268 73.5
Hund11617 Selenicereus undatus HOM05D003479 ORTHO05D004659 3.1e-108 396.4 269 74.0
DCAR_012290 Daucus carota HOM05D003479 ORTHO05D004659 4.0e-108 396.0 266 72.2
Mapoly0022s0091 Marchantia polymorpha HOM05D003479 ORTHO05D004659 5.2e-108 395.6 266 74.1
Zm00001eb049240 Zea mays HOM05D003479 ORTHO05D004659 1.2e-107 394.4 266 73.3
AUR62011690 Chenopodium quinoa HOM05D003479 ORTHO05D004659 4.4e-107 392.5 267 73.4
AagrBONN_evm.TU.Sc2ySwM_344.258 Anthoceros agrestis HOM05D003479 ORTHO05D004659 9.9e-107 391.3 269 73.2
Eucgr.K00546 Eucalyptus grandis HOM05D003479 ORTHO05D004659 1.3e-106 391.0 300 66.3
Lsat_1_v5_gn_9_7140 Lactuca sativa HOM05D003479 ORTHO05D004659 1.3e-106 391.0 268 72.8
SGA_v2.0_scaffold80G25672 Striga asiatica HOM05D003479 ORTHO05D004659 2.9e-106 389.8 266 71.4
FAN26G2262 Fragaria x ananassa HOM05D003479 ORTHO05D004659 8.4e-106 388.3 266 74.8
SMO367G0831 Selaginella moellendorffii HOM05D003479 ORTHO05D004659 8.4e-106 388.3 271 73.1
EL10As5g23623 Beta vulgaris HOM05D003479 ORTHO05D004659 1.1e-105 387.9 303 65.7
Sc05g0000020 Simmondsia chinensis HOM05D003479 ORTHO05D004659 1.4e-105 387.5 267 69.7
CDE11G0371 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 2.4e-105 386.7 266 72.2
ECA247G3194 Erigeron canadensis HOM05D003479 ORTHO05D004659 4.1e-105 386.0 266 72.2
Pp3c5_15420 Physcomitrium patens HOM05D003479 ORTHO05D004659 4.1e-105 386.0 267 70.0
HanXRQChr15g0464511 Helianthus annuus HOM05D003479 ORTHO05D004659 1.6e-104 384.0 266 72.2
Sabra14G0081100 Salix brachista HOM05D003479 ORTHO05D004659 3.5e-104 382.9 266 72.6
Eucgr.K00763 Eucalyptus grandis HOM05D003479 ORTHO05D004659 6.6e-103 378.6 303 64.7
HPP92_010563 Vanilla planifolia HOM05D003479 ORTHO05D004659 8.7e-103 378.3 241 78.0
vmacro02352 Vaccinium macrocarpon HOM05D003479 ORTHO05D004659 4.3e-102 375.9 370 55.7
MELO3C021223.2 Cucumis melo HOM05D003479 ORTHO05D004659 7.6e-99 365.2 318 61.9
Oeu052594.2 Olea europaea HOM05D003479 ORTHO05D004659 4.9e-98 362.5 326 58.3
Ah.02g112690 Amaranthus hybridus HOM05D003479 ORTHO05D004659 3.2e-97 359.8 269 68.8
Cpa.g.sc57.54 Carica papaya HOM05D003479 ORTHO05D004659 4.2e-97 359.4 266 70.7
BraA01t02268Z Brassica rapa HOM05D003479 ORTHO05D004659 5.3e-84 315.8 278 59.7
HPP92_010570 Vanilla planifolia HOM05D003479 ORTHO05D004659 5.5e-81 305.8 218 70.2
Ca_09257_v3 Cicer arietinum L. HOM05D003479 ORTHO05D004659 4.0e-76 289.7 266 59.0
BcaC09g50076 Brassica carinata HOM05D003479 ORTHO05D004659 7.6e-75 285.4 260 58.1
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.8e-71 274.2 265 63.8
BolC1t02872H Brassica oleracea HOM05D003479 ORTHO05D004659 3.1e-60 236.9 300 47.7
A01p23620 Brassica napus HOM05D003479 ORTHO05D004659 1.2e-59 235.0 292 47.6
Rhsim01G0001400 Rhododendron simsii HOM05D003479 ORTHO05D004659 5.5e-57 226.1 143 77.6
BolC1t02863H Brassica oleracea HOM05D003479 ORTHO05D004659 1.1e-54 218.4 206 56.8
FAN23G1814 Fragaria x ananassa HOM05D003479 ORTHO05D004659 2.4e-52 210.7 142 76.1
Cre01.g054800 Chlamydomonas reinhardtii HOM05D003479 ORTHO05D004659 2.0e-51 207.6 286 41.6
SEGI_09065 Sequoiadendron giganteum HOM05D000810 ORTHO05D003737 5.9e-51 206.1 189 61.9
AUR62024550 Chenopodium quinoa HOM05D003479 ORTHO05D004659 2.2e-50 204.1 190 58.9
MD09G1292000 Malus domestica HOM05D003479 ORTHO05D004659 2.2e-50 204.1 312 40.1
C01p29360 Brassica napus HOM05D003479 ORTHO05D004659 9.4e-49 198.7 287 44.3
Gohir.D08G045832 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.3e-45 188.3 291 38.8
Nitab4.5_0001628g0060 Nicotiana tabacum HOM05D003479 ORTHO05D004659 2.4e-44 184.1 289 38.1
CDE11G0667 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 2.0e-43 181.0 295 38.3
Lju2566C1G2 Lonicera japonica HOM05D003479 ORTHO05D004659 4.2e-41 173.3 291 36.4
unitig_578.g16647 Utricularia gibba HOM05D003479 ORTHO05D004659 1.8e-39 167.9 291 36.4
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 1.7e-37 161.4 91 89.0
AUR62024549 Chenopodium quinoa HOM05D003479 ORTHO05D004659 4.8e-37 159.8 274 38.3
unitig_578.g16649 Utricularia gibba HOM05D003479 ORTHO05D004659 8.2e-37 159.1 140 59.3
HPP92_010564 Vanilla planifolia HOM05D003479 ORTHO05D004659 8.2e-37 159.1 219 42.5
SEGI_40217 Sequoiadendron giganteum HOM05D000104 ORTHO05D006385 5.3e-36 156.4 89 86.5
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.2e-35 155.2 82 90.2
Lsat_1_v5_gn_2_36600 Lactuca sativa HOM05D003479 ORTHO05D004659 5.9e-35 152.9 109 69.7
SEGI_30648 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 6.5e-34 149.4 162 53.1
Rhsim01G0001500 Rhododendron simsii HOM05D003479 ORTHO05D004659 1.2e-30 138.7 82 80.5
SEGI_03863 Sequoiadendron giganteum HOM05D001129 ORTHO05D019282 1.2e-30 138.7 84 83.3
Nitab4.5_0001628g0070 Nicotiana tabacum HOM05D003479 ORTHO05D004659 1.3e-29 135.2 82 78.0
Lsat_1_v5_gn_6_105821 Lactuca sativa HOM05D003479 ORTHO05D016156 4.8e-29 133.3 124 57.3
Lsat_1_v5_gn_6_44740 Lactuca sativa HOM05D003479 ORTHO05D004659 4.8e-29 133.3 124 57.3
Lsat_1_v5_gn_9_52321 Lactuca sativa HOM05D003479 ORTHO05D004659 4.8e-29 133.3 124 57.3
CAN.G179.24 Capsicum annuum HOM05D003479 ORTHO05D004659 9.1e-28 129.0 81 75.3
BolC1t02865H Brassica oleracea HOM05D003479 ORTHO05D004659 1.7e-26 124.8 102 60.8
BolC1t02870H Brassica oleracea HOM05D003479 ORTHO05D004659 1.7e-26 124.8 102 60.8
BolC1t02871H Brassica oleracea HOM05D003479 ORTHO05D004659 1.7e-26 124.8 102 60.8
SEGI_04627 Sequoiadendron giganteum HOM05D004921 ORTHO05D019282 6.1e-24 116.3 97 61.9
Eucgr.K00541 Eucalyptus grandis HOM05D003479 ORTHO05D004659 2.0e-22 111.3 79 68.4
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.6e-22 110.9 94 62.8
Lsat_1_v5_gn_2_13561 Lactuca sativa HOM05D003479 ORTHO05D004659 5.7e-22 109.8 75 65.3
TPR.G23936 Trifolium pratense HOM05D003479 ORTHO05D004659 2.8e-21 107.5 99 51.5
SEGI_06113 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 5.4e-20 103.2 193 34.7
Lju2566C0G3 Lonicera japonica HOM05D001538 ORTHO05D011045 4.3e-17 93.6 54 79.6
SEGI_17355 Sequoiadendron giganteum HOM05D000344 ORTHO05D005714 3.6e-16 90.5 67 67.2
Sabra02G0131400 Salix brachista HOM05D003479 ORTHO05D004659 3.0e-15 87.4 48 85.4
SEGI_06146 Sequoiadendron giganteum HOM05D002220 ORTHO05D008182 2.2e-13 81.3 126 42.9
SEGI_09521 Sequoiadendron giganteum HOM05D002125 ORTHO05D002105 8.3e-13 79.3 75 53.3
SEGI_01476 Sequoiadendron giganteum HOM05D004921 ORTHO05D002858 1.3e-10 72.0 49 67.3
SEGI_02282 Sequoiadendron giganteum HOM05D001289 ORTHO05D002298 3.0e-10 70.9 50 72.0
unitig_578.g16646 Utricularia gibba HOM05D003479 ORTHO05D004659 3.0e-10 70.9 133 34.6
Lsat_1_v5_gn_8_60120 Lactuca sativa HOM05D003479 ORTHO05D016156 8.6e-10 69.3 81 49.4
SEGI_09184 Sequoiadendron giganteum HOM05D000042 ORTHO05D000028 2.1e-08 64.7 42 73.8
SEGI_41361 Sequoiadendron giganteum HOM05D000119 ORTHO05D383764 2.1e-08 64.7 67 53.7
MBI08_g20552_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D000004 2.8e-08 64.3 42 76.2
SEGI_21366 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.2e-08 63.2 147 27.2
SEGI_29076 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 6.2e-08 63.2 45 66.7
SEGI_09361 Sequoiadendron giganteum HOM05D000590 ORTHO05D001713 2.3e-07 61.2 63 54.0
SEGI_22676 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.3e-07 61.2 71 40.8
SEGI_40511 Sequoiadendron giganteum HOM05D000112 ORTHO05D011241 3.1e-07 60.8 51 64.7
MBI11_g09044_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 6.8e-07 59.7 86 36.0
CDE05G2601 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 8.9e-07 59.3 148 30.4
SEGI_07381 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.2e-06 58.9 147 29.9
MBI11_g41070_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 2.0e-06 58.2 73 42.5
SEGI_07046 Sequoiadendron giganteum HOM05D003579 ORTHO05D004266 2.6e-06 57.8 51 60.8
SEGI_34749 Sequoiadendron giganteum HOM05D001965 ORTHO05D002112 5.8e-06 56.6 64 51.6
MBI11_g39904_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 7.5e-06 56.2 73 39.7
MBI11_g43863_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 7.5e-06 56.2 73 39.7
SEGI_33036 Sequoiadendron giganteum HOM05D017181 ORTHO05D384248 7.5e-06 56.2 70 38.6


User provided reference genes

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