Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16741 Sequoiadendron giganteum HOM05D025566 ORTHO05D004918 1.7e-288 995.3 514 100.0
SEGI_21638 Sequoiadendron giganteum HOM05D025566 ORTHO05D004918 2.5e-236 822.0 425 100.0
SEGI_06055 Sequoiadendron giganteum HOM05D025566 ORTHO05D004918 1.7e-176 623.2 427 77.3
ATR0705G047 Amborella trichopoda HOM05D004467 ORTHO05D004918 1.5e-31 141.7 426 31.2
TAR626G1578 Trochodendron aralioides HOM05D004467 ORTHO05D004918 1.6e-25 121.7 431 28.8
TAR636G0217 Trochodendron aralioides HOM05D004467 ORTHO05D004918 2.1e-25 121.3 431 28.8
Nn3g18160 Nelumbo nucifera HOM05D004467 ORTHO05D004918 3.6e-25 120.6 438 28.8
SEGI_33361 Sequoiadendron giganteum HOM05D025566 ORTHO05D385763 1.2e-23 115.5 610 26.2
TAR383G0828 Trochodendron aralioides HOM05D004467 ORTHO05D004918 3.9e-19 100.5 418 28.7
MBI01_g24452_MAGBIO Magnolia biondii HOM05D004467 ORTHO05D004918 7.1e-13 79.7 419 25.1
Cpa.g.sc40.31 Carica papaya HOM05D004467 ORTHO05D004918 9.3e-13 79.3 423 29.1
HPP92_027881 Vanilla planifolia HOM05D004467 ORTHO05D004918 3.5e-12 77.4 423 25.5
Ciclev10008049m.g Citrus clementina HOM05D004467 ORTHO05D004918 2.3e-11 74.7 417 26.6
Atru.chr7.1422 Acer truncatum HOM05D004467 ORTHO05D004918 3.0e-11 74.3 421 26.8
Haze_25793 Corylus avellana HOM05D004467 ORTHO05D004918 1.1e-10 72.4 387 28.4
COL.COLO4_34790 Corchorus olitorius HOM05D004467 ORTHO05D004918 3.3e-10 70.9 425 26.6
Gorai.009G027000 Gossypium raimondii HOM05D004467 ORTHO05D004918 4.3e-10 70.5 425 26.1
PSO210G6045 Papaver somniferum HOM05D004467 ORTHO05D004918 4.3e-10 70.5 432 26.6
Prupe.7G224200 Prunus persica HOM05D004467 ORTHO05D004918 5.7e-10 70.1 386 26.4
FAN23G1822 Fragaria x ananassa HOM05D004467 ORTHO05D004918 7.4e-10 69.7 385 27.5
Cfa003215 Carpinus fangiana HOM05D004467 ORTHO05D004918 1.3e-09 68.9 385 27.5
FAN28G1510 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.6e-09 68.6 386 26.9
Gohir.A05G025400 Gossypium hirsutum HOM05D004467 ORTHO05D004918 1.6e-09 68.6 425 26.1
Gohir.D05G026900 Gossypium hirsutum HOM05D004467 ORTHO05D004918 1.6e-09 68.6 425 26.1
Actinidia09440 Actinidia chinensis HOM05D004467 ORTHO05D004918 3.7e-09 67.4 386 26.9
MD15G1193100 Malus domestica HOM05D004467 ORTHO05D004918 3.7e-09 67.4 384 26.0
Aqoxy7G01500 Aquilegia oxysepala HOM05D004467 ORTHO05D004918 4.8e-09 67.0 395 27.8
MBI01_g39827_MAGBIO Magnolia biondii HOM05D004467 ORTHO05D004918 6.3e-09 66.6 198 30.3
Thecc.09G104300 Theobroma cacao HOM05D004467 ORTHO05D004918 1.1e-08 65.9 424 26.7
Duzib168G1064 Durio zibethinus HOM05D004467 ORTHO05D004918 1.4e-08 65.5 424 24.8
FAN26G1468 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.4e-08 65.5 386 26.2
FAN26G2528 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.4e-08 65.5 386 26.2
PSO210G7819 Papaver somniferum HOM05D004467 ORTHO05D004918 1.4e-08 65.5 430 26.3
Hma1.2p1_0945F.1_g240200 Hydrangea macrophylla HOM05D004467 ORTHO05D004918 2.4e-08 64.7 405 27.7
FAN19G0416 Fragaria x ananassa HOM05D004467 ORTHO05D004918 4.1e-08 63.9 384 27.1
Duzib187G1021 Durio zibethinus HOM05D004467 ORTHO05D004918 5.3e-08 63.5 417 25.9
FvH4_1g05760 Fragaria vesca HOM05D004467 ORTHO05D004918 6.9e-08 63.2 384 27.1
Actinidia20407 Actinidia chinensis HOM05D004467 ORTHO05D004918 2.0e-07 61.6 397 26.2
CiPaw.03G227200 Carya illinoinensis HOM05D004467 ORTHO05D004918 2.0e-07 61.6 415 27.2
CANSAT56G0937 Cannabis sativa HOM05D004467 ORTHO05D004918 4.5e-07 60.5 429 25.6
Lj7C659T11 Lonicera japonica HOM05D004467 ORTHO05D004918 5.9e-07 60.1 409 25.4
RcHm_v2.0_Chr2g0091401 Rosa chinensis HOM05D004467 ORTHO05D004918 7.6e-07 59.7 381 28.1
PGR102G2224 Punica granatum HOM05D004467 ORTHO05D004918 2.2e-06 58.2 384 27.1
Zm00001eb343360 Zea mays HOM05D004467 ORTHO05D004918 3.8e-06 57.4 432 25.2
CDE05G2925 Ceratophyllum demersum HOM05D004467 ORTHO05D004918 5.0e-06 57.0 417 24.5
Manes.03G024900 Manihot esculenta HOM05D004467 ORTHO05D004918 5.0e-06 57.0 432 24.8
QL02p042682 Quercus lobata HOM05D004467 ORTHO05D004918 6.5e-06 56.6 383 25.6


User provided reference genes

Program Settings