Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16668 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 3.6e-233 811.2 410 100.0
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 8.9e-83 311.6 341 51.3
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 3.5e-79 299.7 327 50.5
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 4.6e-79 299.3 328 51.5
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 1.0e-78 298.1 330 50.3
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 6.6e-78 295.4 318 51.6
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 1.4e-75 287.7 330 49.7
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 5.2e-75 285.8 255 58.8
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 5.2e-75 285.8 331 49.8
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.2e-74 284.6 330 49.1
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 2.6e-74 283.5 259 56.0
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 2.6e-74 283.5 259 56.0
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 5.8e-74 282.3 329 49.5
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 7.6e-74 282.0 333 49.8
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 7.6e-74 282.0 331 49.2
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.7e-73 280.8 335 48.7
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 3.7e-73 279.6 331 51.1
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 4.9e-73 279.3 266 54.9
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 4.1e-72 276.2 331 48.6
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 4.1e-72 276.2 266 54.1
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 9.2e-72 275.0 332 49.4
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.2e-71 274.6 251 56.6
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.2e-71 274.6 352 46.3
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 3.5e-71 273.1 330 47.3
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 4.6e-71 272.7 329 48.3
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 4.6e-71 272.7 331 50.2
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 6.0e-71 272.3 330 48.2
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 6.0e-71 272.3 331 50.2
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 6.0e-71 272.3 330 49.7
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 6.0e-71 272.3 332 49.7
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 7.8e-71 271.9 251 56.6
Ah.13g073400 Amaranthus hybridus HOM05D004461 ORTHO05D005543 3.9e-70 269.6 287 51.9
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 3.9e-70 269.6 337 47.8
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 5.1e-70 269.2 337 48.4
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 5.1e-70 269.2 331 50.2
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 1.1e-69 268.1 334 49.1
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 1.9e-69 267.3 328 49.1
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 7.3e-69 265.4 331 48.3
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 1.6e-68 264.2 261 53.3
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 2.1e-68 263.8 332 45.5
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 2.1e-68 263.8 324 48.8
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 2.8e-68 263.5 329 45.6
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 2.8e-68 263.5 330 48.8
THA.LOC104802333 Tarenaya hassleriana HOM05D004461 ORTHO05D005543 2.8e-68 263.5 332 47.3
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 3.6e-68 263.1 328 46.6
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 4.7e-68 262.7 329 45.6
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 4.7e-68 262.7 277 51.6
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 6.2e-68 262.3 331 45.3
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 8.1e-68 261.9 260 53.5
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 1.1e-67 261.5 327 45.9
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 1.1e-67 261.5 347 46.4
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 1.1e-67 261.5 327 46.5
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 1.4e-67 261.2 261 52.5
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 1.8e-67 260.8 259 52.9
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 2.4e-67 260.4 329 47.1
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 2.4e-67 260.4 327 45.3
Sed0020878 Sechium edule HOM05D004461 ORTHO05D005543 2.4e-67 260.4 330 46.4
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 4.0e-67 259.6 301 49.5
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 4.0e-67 259.6 330 48.5
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 6.8e-67 258.8 330 46.7
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 6.8e-67 258.8 329 45.6
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 1.5e-66 257.7 334 45.8
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 2.0e-66 257.3 328 47.9
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 2.0e-66 257.3 332 45.5
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 2.6e-66 256.9 328 47.9
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 3.4e-66 256.5 335 47.2
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 7.6e-66 255.4 327 44.6
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 9.9e-66 255.0 288 51.0
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 2.2e-65 253.8 329 44.4
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 2.2e-65 253.8 329 44.4
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 2.9e-65 253.4 332 47.6
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 3.8e-65 253.1 310 47.1
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 3.8e-65 253.1 370 44.1
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 4.9e-65 252.7 334 47.0
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 4.9e-65 252.7 330 45.8
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 4.9e-65 252.7 330 47.0
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 4.9e-65 252.7 262 53.8
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 6.4e-65 252.3 332 46.4
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 6.4e-65 252.3 332 46.1
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 8.4e-65 251.9 331 47.1
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 1.1e-64 251.5 328 44.2
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 1.9e-64 250.8 332 45.8
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 1.9e-64 250.8 332 45.8
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 1.9e-64 250.8 309 47.6
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.9e-64 250.8 309 47.6
Nitab4.5_0000474g0010 Nicotiana tabacum HOM05D004461 ORTHO05D005543 2.4e-64 250.4 251 52.6
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 4.2e-64 249.6 337 45.7
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 5.4e-64 249.2 334 46.7
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 5.4e-64 249.2 251 52.6
Nitab4.5_0002660g0030 Nicotiana tabacum HOM05D004461 ORTHO05D005543 7.1e-64 248.8 251 53.0
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 1.2e-63 248.1 268 53.0
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 2.7e-63 246.9 332 45.2
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 3.5e-63 246.5 337 44.2
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 2.3e-62 243.8 335 44.8
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 5.1e-62 242.7 330 44.8
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 6.6e-62 242.3 283 48.8
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 8.7e-62 241.9 287 48.1
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 1.1e-61 241.5 335 45.1
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 1.5e-61 241.1 335 44.8
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 1.5e-61 241.1 390 40.3
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 1.9e-61 240.7 308 47.1
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 1.6e-60 237.7 334 44.3
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 4.8e-60 236.1 334 44.0
Sed0010516 Sechium edule HOM05D004461 ORTHO05D005543 8.1e-60 235.3 264 49.6
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.8e-59 234.2 259 50.6
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 5.3e-59 232.6 341 38.7
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 6.9e-59 232.3 333 44.1
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 2.6e-58 230.3 189 59.3
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 2.9e-57 226.9 258 48.8
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 6.4e-57 225.7 350 42.0
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 1.4e-56 224.6 365 40.5
SHI26120 Sapria himalayana HOM05D004461 ORTHO05D005543 4.6e-55 219.5 260 49.2
BcaC07g40445 Brassica carinata HOM05D004461 ORTHO05D005543 3.0e-54 216.9 336 42.6
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 7.6e-50 202.2 319 40.1
Ciclev10018900m.g Citrus clementina HOM05D004461 ORTHO05D005543 1.1e-43 181.8 125 68.8
CSS0024115 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 2.1e-31 141.0 93 72.0
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 1.0e-30 138.7 239 38.9
vmacro00682 Vaccinium macrocarpon HOM05D004461 ORTHO05D005543 6.7e-30 136.0 85 76.5
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 5.7e-29 132.9 183 43.7
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 3.1e-27 127.1 244 35.2
Gohir.D02G008175 Gossypium hirsutum HOM05D004461 ORTHO05D005543 2.9e-25 120.6 234 37.6
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.7e-17 94.7 209 36.4
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.8e-17 93.6 213 35.7
TAR624G0657 Trochodendron aralioides HOM05D004461 ORTHO05D005543 7.7e-10 69.3 64 51.6
PRCOL_00002927 Prasinoderma coloniale HOM05D004461 ORTHO05D005543 6.5e-09 66.2 189 28.6


User provided reference genes

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