Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.1e-276 956.1 492 100.0
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 3.8e-40 170.2 358 33.8
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 6.4e-27 126.3 346 30.9
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 6.0e-25 119.8 425 26.4
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 3.6e-22 110.5 357 27.2
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 3.1e-21 107.5 338 27.8
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 1.2e-20 105.5 340 26.2
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 1.2e-20 105.5 340 26.8
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 2.2e-19 101.3 345 29.0
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 6.4e-19 99.8 352 26.4
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.1e-18 99.0 341 24.6
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 1.1e-18 99.0 342 25.1
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 1.4e-18 98.6 343 24.8
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 3.2e-18 97.4 336 26.2
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 5.4e-18 96.7 341 24.0
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 7.1e-18 96.3 341 23.8
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 3.5e-17 94.0 341 26.7
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.5e-17 94.0 342 26.3
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 6.0e-17 93.2 336 24.4
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 1.0e-16 92.4 343 25.4
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 1.3e-16 92.0 355 25.6
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 3.0e-16 90.9 336 25.3
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 3.0e-16 90.9 343 25.1
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 3.0e-16 90.9 340 25.9
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 3.9e-16 90.5 349 27.2
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 5.1e-16 90.1 353 24.9
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 5.1e-16 90.1 341 25.8
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 5.1e-16 90.1 348 26.7
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 6.6e-16 89.7 358 24.9
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 8.6e-16 89.4 355 24.8
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.1e-15 89.0 341 23.5
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 1.5e-15 88.6 358 25.1
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 2.5e-15 87.8 339 26.3
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 2.5e-15 87.8 344 24.7
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 2.5e-15 87.8 350 24.3
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 2.5e-15 87.8 340 23.2
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 3.3e-15 87.4 348 24.7
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 3.3e-15 87.4 339 25.1
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 4.3e-15 87.0 345 25.5
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 4.3e-15 87.0 345 25.5
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 7.3e-15 86.3 335 25.4
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 7.3e-15 86.3 335 25.4
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 9.5e-15 85.9 339 25.7
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 9.5e-15 85.9 339 24.8
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 1.2e-14 85.5 336 25.3
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 1.2e-14 85.5 345 24.1
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 1.2e-14 85.5 344 26.2
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 1.2e-14 85.5 342 24.9
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 1.2e-14 85.5 340 24.4
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 1.6e-14 85.1 346 24.6
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 1.6e-14 85.1 341 25.2
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 1.6e-14 85.1 343 26.2
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 2.8e-14 84.3 351 23.4
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 2.8e-14 84.3 345 25.2
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 3.6e-14 84.0 339 24.5
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 6.2e-14 83.2 345 24.9
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.1e-13 82.4 350 23.4
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 1.4e-13 82.0 342 25.1
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 1.8e-13 81.6 409 24.9
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 1.8e-13 81.6 337 24.9
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 2.3e-13 81.3 350 26.9
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 2.3e-13 81.3 343 27.1
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 4.0e-13 80.5 97 38.1
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 4.0e-13 80.5 321 24.3
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 4.0e-13 80.5 357 25.2
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 5.2e-13 80.1 336 25.9
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 5.2e-13 80.1 350 24.0
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 8.9e-13 79.3 344 23.5
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 8.9e-13 79.3 332 27.1
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 1.2e-12 79.0 342 24.3
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.0e-12 78.2 336 23.5
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 3.4e-12 77.4 339 23.0
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 3.4e-12 77.4 339 23.0
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 3.4e-12 77.4 339 23.6
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 4.4e-12 77.0 337 24.9
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 4.4e-12 77.0 135 31.9
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 4.4e-12 77.0 336 23.2
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 7.6e-12 76.3 346 23.4
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 7.6e-12 76.3 350 22.0
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 9.9e-12 75.9 357 22.7
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 9.9e-12 75.9 324 23.1
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 1.3e-11 75.5 338 25.1
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 1.3e-11 75.5 339 25.7
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 1.3e-11 75.5 116 32.8
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.7e-11 75.1 345 23.5
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.2e-11 74.7 350 22.9
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 2.9e-11 74.3 341 24.9
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 8.4e-11 72.8 334 23.7
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 1.1e-10 72.4 341 22.9
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 1.1e-10 72.4 369 23.0
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 1.4e-10 72.0 88 38.6
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.9e-10 71.6 346 24.6
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.9e-10 71.6 101 33.7
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 2.4e-10 71.2 345 22.6
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 3.2e-10 70.9 318 22.0
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 3.2e-10 70.9 149 30.2
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 3.2e-10 70.9 340 22.9
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 4.1e-10 70.5 95 35.8
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 5.4e-10 70.1 94 37.2
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 7.1e-10 69.7 343 22.7
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 9.2e-10 69.3 350 24.0
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 2.1e-09 68.2 113 33.6
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 3.5e-09 67.4 335 24.2
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 6.0e-09 66.6 335 23.6
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 6.0e-09 66.6 365 22.7
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.0e-08 65.9 96 32.3
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 2.3e-08 64.7 325 24.3
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 2.3e-08 64.7 363 24.2
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 3.9e-08 63.9 100 29.0
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.9e-08 63.9 110 32.7
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 8.6e-08 62.8 337 23.4
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 1.1e-07 62.4 344 25.3
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 1.5e-07 62.0 344 23.5
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 1.2e-06 58.9 131 31.3
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 1.6e-06 58.5 337 21.1
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 1.6e-06 58.5 91 34.1
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 2.1e-06 58.2 84 32.1
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 2.1e-06 58.2 110 24.5
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 2.1e-06 58.2 91 36.3
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 2.8e-06 57.8 353 24.6
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 4.7e-06 57.0 62 41.9
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 6.2e-06 56.6 93 35.5
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 8.1e-06 56.2 384 22.1


User provided reference genes

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