Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16525 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 2.7e-152 542.0 275 100.0
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 6.7e-18 95.5 102 49.0
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 8.8e-18 95.1 99 49.5
SMO139G0044 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 4.4e-17 92.8 116 44.8
SMO145G0024 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 4.4e-17 92.8 112 47.3
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 5.7e-17 92.4 96 47.9
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 7.4e-17 92.0 96 49.0
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 9.7e-17 91.7 97 48.5
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 1.7e-16 90.9 96 50.0
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 2.8e-16 90.1 102 47.1
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 3.7e-16 89.7 99 47.5
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 4.8e-16 89.4 95 48.4
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 4.8e-16 89.4 95 48.4
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 6.3e-16 89.0 96 47.9
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 8.2e-16 88.6 96 45.8
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 1.1e-15 88.2 98 48.0
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.1e-15 88.2 96 45.8
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.1e-15 88.2 96 45.8
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 1.1e-15 88.2 103 43.7
Gohir.A11G168300 Gossypium hirsutum HOM05D005714 ORTHO05D006812 1.4e-15 87.8 97 47.4
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 1.4e-15 87.8 97 47.4
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 1.4e-15 87.8 102 46.1
Psat1g062640 Pisum sativum HOM05D005714 ORTHO05D006812 1.4e-15 87.8 95 47.4
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 1.8e-15 87.4 97 47.4
TAR622G1272 Trochodendron aralioides HOM05D005714 ORTHO05D006812 2.4e-15 87.0 97 48.5
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 3.1e-15 86.7 97 47.4
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 3.1e-15 86.7 98 48.0
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 4.1e-15 86.3 92 52.2
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 4.1e-15 86.3 98 46.9
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 4.1e-15 86.3 98 46.9
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 4.1e-15 86.3 96 49.0
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 5.3e-15 85.9 97 48.5
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 5.3e-15 85.9 97 45.4
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 5.3e-15 85.9 98 48.0
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 7.0e-15 85.5 97 48.5
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 7.0e-15 85.5 97 49.5
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 7.0e-15 85.5 96 46.9
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 7.0e-15 85.5 95 45.3
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 9.1e-15 85.1 95 45.3
ATR0752G125 Amborella trichopoda HOM05D005714 ORTHO05D006812 9.1e-15 85.1 93 49.5
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.2e-14 84.7 97 48.5
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 1.6e-14 84.3 98 45.9
FAN05G0119 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.6e-14 84.3 97 47.4
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 1.6e-14 84.3 97 46.4
RcHm_v2.0_Chr2g0163701 Rosa chinensis HOM05D005714 ORTHO05D006812 1.6e-14 84.3 97 48.5
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 1.6e-14 84.3 97 48.5
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 2.0e-14 84.0 97 46.4
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 2.0e-14 84.0 98 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4539 Anthoceros agrestis HOM05D005714 ORTHO05D006812 2.6e-14 83.6 99 46.5
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 2.6e-14 83.6 98 46.9
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 2.6e-14 83.6 95 46.3
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 2.6e-14 83.6 98 46.9
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 3.5e-14 83.2 110 41.8
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 3.5e-14 83.2 96 45.8
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 3.5e-14 83.2 95 46.3
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 3.5e-14 83.2 95 46.3
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 3.5e-14 83.2 95 44.2
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 4.5e-14 82.8 95 46.3
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 4.5e-14 82.8 97 47.4
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 4.5e-14 82.8 102 44.1
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 5.9e-14 82.4 97 46.4
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 5.9e-14 82.4 98 44.9
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 7.7e-14 82.0 97 45.4
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 7.7e-14 82.0 98 45.9
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 1.0e-13 81.6 97 46.4
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 1.0e-13 81.6 97 48.5
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 1.3e-13 81.3 95 45.3
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 1.3e-13 81.3 98 42.9
C09p61160 Brassica napus HOM05D005714 ORTHO05D006812 1.7e-13 80.9 100 45.0
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 2.2e-13 80.5 95 45.3
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 2.9e-13 80.1 109 42.2
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 3.8e-13 79.7 97 44.3
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 5.0e-13 79.3 98 44.9
Sopen03g009720 Solanum pennellii HOM05D005714 ORTHO05D006812 5.0e-13 79.3 98 43.9
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 6.5e-13 79.0 97 45.4
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 8.5e-13 78.6 92 47.8
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 8.5e-13 78.6 101 41.6
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 8.5e-13 78.6 95 43.2
Medtr3g067495 Medicago truncatula HOM05D005714 ORTHO05D006812 8.5e-13 78.6 93 45.2
SEGI_39714 Sequoiadendron giganteum HOM05D001016 ORTHO05D003396 8.5e-13 78.6 45 91.1
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 1.1e-12 78.2 108 41.7
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 1.5e-12 77.8 95 42.1
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 1.9e-12 77.4 98 46.9
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 1.9e-12 77.4 98 43.9
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 3.2e-12 76.6 99 44.4
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 3.2e-12 76.6 99 44.4
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 3.2e-12 76.6 95 43.2
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 3.2e-12 76.6 95 42.1
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 3.2e-12 76.6 95 43.2
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 5.5e-12 75.9 95 43.2
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 5.5e-12 75.9 101 42.6
Ciclev10012317m.g Citrus clementina HOM05D005714 ORTHO05D006812 7.2e-12 75.5 98 41.8
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 9.4e-12 75.1 100 45.0
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 9.4e-12 75.1 100 45.0
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 9.4e-12 75.1 100 45.0
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 9.4e-12 75.1 98 41.8
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 9.4e-12 75.1 97 44.3
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 9.4e-12 75.1 100 43.0
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 9.4e-12 75.1 96 43.8
Solyc03g046260.2 Solanum lycopersicum HOM05D005714 ORTHO05D006812 9.4e-12 75.1 97 42.3
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 1.2e-11 74.7 108 40.7
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 1.2e-11 74.7 108 40.7
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 1.6e-11 74.3 95 42.1
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 1.6e-11 74.3 95 42.1
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 2.1e-11 73.9 98 42.9
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 2.1e-11 73.9 98 42.9
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 3.6e-11 73.2 93 40.9
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 4.7e-11 72.8 103 39.8
Mapoly0066s0019 Marchantia polymorpha HOM05D005714 ORTHO05D006812 1.0e-10 71.6 99 41.4
Zm00001eb208920 Zea mays HOM05D005714 ORTHO05D006812 1.8e-10 70.9 99 40.4
SEGI_37848 Sequoiadendron giganteum HOM05D000106 ORTHO05D017072 8.8e-10 68.6 50 70.0
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.2e-08 63.9 97 40.2
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.2e-08 63.9 97 40.2
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 1.1e-07 61.6 66 42.4
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 4.1e-07 59.7 52 59.6
MD17G1072400 Malus domestica HOM05D005714 ORTHO05D006812 2.7e-06 57.0 97 37.1


User provided reference genes

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