Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16491 Sequoiadendron giganteum HOM05D004628 ORTHO05D005166 0.0e+00 1783.5 942 100.0
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 6.9e-22 110.5 998 24.9
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 1.5e-21 109.4 957 24.3
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 1.7e-20 105.9 1000 26.5
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 3.8e-20 104.8 1000 26.6
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 2.7e-18 98.6 305 32.8
SEGI_15596 Sequoiadendron giganteum HOM05D004628 ORTHO05D005166 4.6e-18 97.8 124 54.0
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 6.1e-18 97.4 1044 25.9
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 1.1e-16 93.2 983 25.3
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 2.0e-16 92.4 1037 24.6
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 2.5e-16 92.0 420 29.8
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 3.3e-16 91.7 984 24.9
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.7e-15 89.4 322 33.2
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 2.2e-15 89.0 977 24.6
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 3.7e-15 88.2 981 23.9
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 4.8e-15 87.8 956 25.7
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 8.2e-15 87.0 1040 24.5
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 1.4e-14 86.3 1016 24.6
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 5.3e-14 84.3 327 32.1
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 1.2e-13 83.2 968 25.2
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 1.2e-13 83.2 348 31.9
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 1.2e-13 83.2 963 24.9
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 3.4e-13 81.6 342 30.4
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 3.4e-13 81.6 307 29.3
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 3.4e-13 81.6 307 29.3
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 4.5e-13 81.3 1004 23.3
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 1.0e-12 80.1 277 32.1
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 1.0e-12 80.1 335 31.3
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 1.0e-12 80.1 983 24.5
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.3e-12 79.7 303 31.4
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 1.7e-12 79.3 308 32.1
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 2.2e-12 79.0 182 37.9
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 2.2e-12 79.0 359 30.6
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 3.8e-12 78.2 400 27.8
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 3.8e-12 78.2 325 31.4
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 5.0e-12 77.8 975 25.2
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 5.0e-12 77.8 322 31.1
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 5.0e-12 77.8 165 41.2
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 6.5e-12 77.4 294 30.3
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 8.5e-12 77.0 981 24.4
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 1.1e-11 76.6 303 31.4
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 1.4e-11 76.3 294 29.9
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 1.9e-11 75.9 238 34.5
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 1.9e-11 75.9 970 22.7
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 2.5e-11 75.5 257 31.1
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 3.2e-11 75.1 299 30.1
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 5.5e-11 74.3 997 23.3
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 9.4e-11 73.6 989 24.3
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 1.6e-10 72.8 1013 24.5
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 1.6e-10 72.8 994 24.6
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 2.1e-10 72.4 331 29.3
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 3.6e-10 71.6 988 23.8
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 3.6e-10 71.6 322 28.9
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 3.6e-10 71.6 282 28.0
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 4.7e-10 71.2 325 29.8
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 6.1e-10 70.9 1037 25.9
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 6.1e-10 70.9 339 29.8
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 7.9e-10 70.5 241 31.5
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 7.9e-10 70.5 241 31.5
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 7.9e-10 70.5 241 31.5
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 7.9e-10 70.5 1023 22.7
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 7.9e-10 70.5 327 30.0
ATR0767G029 Amborella trichopoda HOM05D004628 ORTHO05D005166 1.0e-09 70.1 211 32.7
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 1.0e-09 70.1 108 49.1
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 1.0e-09 70.1 300 29.7
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.4e-09 69.7 982 24.1
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 1.4e-09 69.7 300 29.7
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 1.4e-09 69.7 338 29.3
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 1.4e-09 69.7 993 23.6
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.4e-09 69.7 212 30.7
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 1.8e-09 69.3 242 28.9
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 2.3e-09 68.9 296 28.7
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 2.3e-09 68.9 154 36.4
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 3.9e-09 68.2 963 24.5
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 5.1e-09 67.8 983 24.2
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 5.1e-09 67.8 210 30.5
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 5.1e-09 67.8 242 28.9
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 5.1e-09 67.8 295 30.2
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 5.1e-09 67.8 998 23.7
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 6.7e-09 67.4 402 27.4
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 6.7e-09 67.4 1000 24.7
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 8.8e-09 67.0 964 22.2
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.1e-08 66.6 210 30.0
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 1.1e-08 66.6 969 22.3
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 1.5e-08 66.2 221 29.9
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.5e-08 66.2 956 24.0
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.6e-08 65.5 242 28.1
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 3.3e-08 65.1 191 34.0
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 4.4e-08 64.7 968 25.5
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 5.7e-08 64.3 316 30.7
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 5.7e-08 64.3 245 29.4
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 5.7e-08 64.3 1039 25.6
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 9.7e-08 63.5 279 31.2
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 9.7e-08 63.5 333 29.4
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 9.7e-08 63.5 248 32.3
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 1.3e-07 63.2 1029 24.7
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 1.3e-07 63.2 190 32.6
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 1.3e-07 63.2 326 27.6
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.7e-07 62.8 962 23.8
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 2.8e-07 62.0 342 28.9
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.8e-07 62.0 116 42.2
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 3.7e-07 61.6 1016 23.6
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 3.7e-07 61.6 322 25.5
ATR0705G064 Amborella trichopoda HOM05D008208 ORTHO05D010143 6.3e-07 60.8 873 23.9
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 6.3e-07 60.8 206 31.6
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.1e-06 60.1 991 23.5
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 1.4e-06 59.7 989 24.5
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.8e-06 59.3 975 23.4
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 1.8e-06 59.3 199 31.7
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 2.4e-06 58.9 87 48.3
Zm00001eb217550 Zea mays HOM05D058439 ORTHO05D005166 2.4e-06 58.9 292 28.8
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 3.1e-06 58.5 177 31.6
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 4.1e-06 58.2 972 24.1
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 5.3e-06 57.8 264 28.4
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 7.0e-06 57.4 922 23.1
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 9.1e-06 57.0 861 22.4
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 9.1e-06 57.0 278 30.9


User provided reference genes

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