Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16425 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 1.9e-141 506.1 310 100.0
SEGI_17863 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 1.5e-21 107.8 57 87.7
SEGI_27932 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 1.9e-21 107.5 74 74.3
SEGI_27032 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 4.3e-21 106.3 75 72.0
ClCG02G011960 Citrullus lanatus HOM05D003324 ORTHO05D003957 1.4e-19 101.3 59 79.7
MELO3C020822.2 Cucumis melo HOM05D003324 ORTHO05D003957 1.4e-19 101.3 59 79.7
CsaV3_2G016130 Cucumis sativus L. HOM05D003324 ORTHO05D003957 1.4e-19 101.3 59 79.7
Oeu005706.1 Olea europaea HOM05D003324 ORTHO05D003957 1.4e-19 101.3 59 79.7
Actinidia23578 Actinidia chinensis HOM05D003324 ORTHO05D003957 1.8e-19 100.9 59 78.0
CSS0032873 Camellia sinensis var. sinensis HOM05D003324 ORTHO05D003957 1.8e-19 100.9 59 78.0
Atru.chr5.3322 Acer truncatum HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
ATR0165G026 Amborella trichopoda HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
MSTRG.27635 Avicennia marina HOM05D003324 ORTHO05D003957 3.1e-19 100.1 68 69.1
Ciclev10028645m.g Citrus clementina HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
Lj1g0008114 Lotus japonicus HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
MBI08_g21302_MAGBIO Magnolia biondii HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
Oeu021646.3 Olea europaea HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
TWI31G0567 Tripterygium wilfordii HOM05D003324 ORTHO05D003957 3.1e-19 100.1 59 78.0
Lalb_Chr01g0001931 Lupinus albus HOM05D003324 ORTHO05D003957 4.0e-19 99.8 62 74.2
TAR625G0629 Trochodendron aralioides HOM05D003324 ORTHO05D003957 4.0e-19 99.8 59 76.3
DCAR_022814 Daucus carota HOM05D003324 ORTHO05D003957 5.2e-19 99.4 59 76.3
SGA_v2.0_scaffold207G41923 Striga asiatica HOM05D003324 ORTHO05D003957 5.2e-19 99.4 59 76.3
MSTRG.5453 Avicennia marina HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
CAN.G940.13 Capsicum annuum HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Ca_15299_v3 Cicer arietinum L. HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Glyma.12G033600 Glycine max HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Lj3g0005944 Lotus japonicus HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Nitab4.5_0001225g0150 Nicotiana tabacum HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Nitab4.5_0001583g0110 Nicotiana tabacum HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Potri.009G135600 Populus trichocarpa HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Rhsim05G0056600 Rhododendron simsii HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Solyc08g005980.3 Solanum lycopersicum HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
Sopen08g001950 Solanum pennellii HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
PGSC0003DMG400014843 Solanum tuberosum HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
TWI79G1203 Tripterygium wilfordii HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
TAR381G0120 Trochodendron aralioides HOM05D003324 ORTHO05D003957 6.9e-19 99.0 59 76.3
HPP92_020725 Vanilla planifolia HOM05D003324 ORTHO05D003957 6.9e-19 99.0 67 70.1
Cpa.g.sc37.129 Carica papaya HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Cfa005248 Carpinus fangiana HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Ca_19075_v3 Cicer arietinum L. HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
ClCG02G004070 Citrullus lanatus HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 78.0
Haze_02135 Corylus avellana HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Gohir.A01G169000 Gossypium hirsutum HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Gohir.D01G159800 Gossypium hirsutum HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Gorai.002G198400 Gossypium raimondii HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Phvul.011G036200 Phaseolus vulgaris HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
Psat5g001480 Pisum sativum HOM05D003324 ORTHO05D003957 9.0e-19 98.6 62 72.6
QL11p050718 Quercus lobata HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
SalBow1G2196 Salvia bowleyana HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
THA.LOC104807375 Tarenaya hassleriana HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
VMungo1127G2267 Vigna mungo HOM05D003324 ORTHO05D003957 9.0e-19 98.6 59 76.3
COL.COLO4_17342 Corchorus olitorius HOM05D003324 ORTHO05D003957 1.2e-18 98.2 59 76.3
DCAR_022813 Daucus carota HOM05D003324 ORTHO05D003957 1.2e-18 98.2 59 74.6
FAN18G2325 Fragaria x ananassa HOM05D003324 ORTHO05D003957 1.2e-18 98.2 59 74.6
Glyma.04G003500 Glycine max HOM05D003324 ORTHO05D003957 1.2e-18 98.2 58 75.9
Glyma.06G003400 Glycine max HOM05D003324 ORTHO05D003957 1.2e-18 98.2 58 75.9
Lalb_Chr19g0139041 Lupinus albus HOM05D003324 ORTHO05D003957 1.2e-18 98.2 59 74.6
Peaxi162Scf00362g00628 Petunia axillaris HOM05D003324 ORTHO05D003957 1.2e-18 98.2 69 71.0
Thecc.02G059000 Theobroma cacao HOM05D003324 ORTHO05D003957 1.2e-18 98.2 59 76.3
VMungo1309G1547 Vigna mungo HOM05D003324 ORTHO05D003957 1.2e-18 98.2 59 74.6
Dinv14108 Davidia involucrata HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Nitab4.5_0000283g0390 Nicotiana tabacum HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Nitab4.5_0003914g0100 Nicotiana tabacum HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Os06g0116400 Oryza sativa ssp. japonica HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
PGR142G0482 Punica granatum HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Sabra09G0105300 Salix brachista HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
SalBow3G0968 Salvia bowleyana HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Hund00020 Selenicereus undatus HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Sc08g0002890 Simmondsia chinensis HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
TPR.G28480 Trifolium pratense HOM05D003324 ORTHO05D003957 1.5e-18 97.8 59 74.6
Aa31LG8G14040 Aethionema arabicum HOM05D003324 ORTHO05D003957 2.0e-18 97.4 59 74.6
Aqoxy5G03024 Aquilegia oxysepala HOM05D003324 ORTHO05D003957 2.0e-18 97.4 59 74.6
Duzib132G0685 Durio zibethinus HOM05D003324 ORTHO05D003957 2.0e-18 97.4 59 74.6
Phvul.009G119100 Phaseolus vulgaris HOM05D003324 ORTHO05D003957 2.0e-18 97.4 58 75.9
THA.LOC104804326 Tarenaya hassleriana HOM05D003324 ORTHO05D003957 2.0e-18 97.4 59 74.6
vmacro17344 Vaccinium macrocarpon HOM05D003324 ORTHO05D003957 2.0e-18 97.4 59 74.6
BcaB07g31749 Brassica carinata HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 72.9
CiPaw.05G082500 Carya illinoinensis HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 74.6
Thhalv10022725m.g Eutrema salsugineum HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 72.9
Hma1.2p1_0032F.1_g019360 Hydrangea macrophylla HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 74.6
Lsat_1_v5_gn_8_124700 Lactuca sativa HOM05D003324 ORTHO05D003957 2.6e-18 97.1 68 69.1
Psat7g138480 Pisum sativum HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 74.6
Sp3g29920 Schrenkiella parvula HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 72.9
GSVIVG01024018001 Vitis vinifera HOM05D003324 ORTHO05D003957 2.6e-18 97.1 59 72.9
Aa31LG2G15420 Aethionema arabicum HOM05D003324 ORTHO05D003957 3.4e-18 96.7 58 74.1
AL3G49540 Arabidopsis lyrata HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
AT2G16800 Arabidopsis thaliana HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
EL10Ac9g21376 Beta vulgaris HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
BcaC04g23003 Brassica carinata HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
A09p11150 Brassica napus HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
C09p13140 Brassica napus HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
BolC9t54209H Brassica oleracea HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
BraA09t36757Z Brassica rapa HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
Carub.0003s3062 Capsella rubella HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
AUR62013029 Chenopodium quinoa HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
AUR62043667 Chenopodium quinoa HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
Eucgr.I01422 Eucalyptus grandis HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
Oeu061403.1 Olea europaea HOM05D003324 ORTHO05D003957 3.4e-18 96.7 58 75.9
Peaxi162Scf00045g01446 Petunia axillaris HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 72.9
TAR376G0087 Trochodendron aralioides HOM05D003324 ORTHO05D003957 3.4e-18 96.7 59 74.6
CAN.G588.83 Capsicum annuum HOM05D003324 ORTHO05D003957 4.4e-18 96.3 63 69.8
CARHR107130 Cardamine hirsuta HOM05D003324 ORTHO05D003957 4.4e-18 96.3 59 72.9
Duzib052G0103 Durio zibethinus HOM05D003324 ORTHO05D003957 4.4e-18 96.3 59 72.9
ECA233G0359 Erigeron canadensis HOM05D003324 ORTHO05D003957 4.4e-18 96.3 59 74.6
HanXRQChr17g0570681 Helianthus annuus HOM05D003324 ORTHO05D003957 4.4e-18 96.3 59 74.6
Mapoly0140s0003 Marchantia polymorpha HOM05D003324 ORTHO05D003957 4.4e-18 96.3 59 71.2
Nn6g31971 Nelumbo nucifera HOM05D003324 ORTHO05D003957 4.4e-18 96.3 59 72.9
Cc09_g10160 Coffea canephora HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 71.2
MELO3C013351.2 Cucumis melo HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 74.6
HanXRQChr17g0557671 Helianthus annuus HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 72.9
Manes.11G096400 Manihot esculenta HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 72.9
Nn5g30793 Nelumbo nucifera HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 72.9
Os03g0156700 Oryza sativa ssp. japonica HOM05D003324 ORTHO05D003957 5.8e-18 95.9 58 72.4
Potri.004G175700 Populus trichocarpa HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 72.9
Prupe.7G263700 Prunus persica HOM05D003324 ORTHO05D003957 5.8e-18 95.9 59 72.9
Sp7g32850 Schrenkiella parvula HOM05D003324 ORTHO05D003957 5.8e-18 95.9 68 66.2
Solyc01g111620.3 Solanum lycopersicum HOM05D003324 ORTHO05D003957 5.8e-18 95.9 63 69.8
Sopen01g053660 Solanum pennellii HOM05D003324 ORTHO05D003957 5.8e-18 95.9 63 69.8
PGSC0003DMG400006169 Solanum tuberosum HOM05D003324 ORTHO05D003957 5.8e-18 95.9 63 69.8
CANSAT80G2157 Cannabis sativa HOM05D003324 ORTHO05D003957 7.6e-18 95.5 59 74.6
CiPaw.06G121700 Carya illinoinensis HOM05D003324 ORTHO05D003957 7.6e-18 95.5 59 72.9
CsaV3_7G001050 Cucumis sativus L. HOM05D003324 ORTHO05D003957 7.6e-18 95.5 59 74.6
Migut.B00077 Erythranthe guttata HOM05D003324 ORTHO05D003957 7.6e-18 95.5 63 66.7
Sed0007413 Sechium edule HOM05D003324 ORTHO05D003957 7.6e-18 95.5 59 74.6
unitig_0.g2354 Utricularia gibba HOM05D003324 ORTHO05D003957 7.6e-18 95.5 59 71.2
GSVIVG01009965001 Vitis vinifera HOM05D003324 ORTHO05D003957 7.6e-18 95.5 59 72.9
Ah.01g023010 Amaranthus hybridus HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 71.2
Migut.N01322 Erythranthe guttata HOM05D003324 ORTHO05D003957 9.9e-18 95.1 58 72.4
FvH4_5g30360 Fragaria vesca HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
FAN04G0412 Fragaria x ananassa HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
FAN08G1567 Fragaria x ananassa HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
FAN13G0733 Fragaria x ananassa HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
Lalb_Chr23g0264991 Lupinus albus HOM05D003324 ORTHO05D003957 9.9e-18 95.1 58 70.7
MD05G1122200 Malus domestica HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
MD10G1124900 Malus domestica HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
Prupe.8G165900 Prunus persica HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
RcHm_v2.0_Chr7g0224771 Rosa chinensis HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 72.9
Sed0006688 Sechium edule HOM05D003324 ORTHO05D003957 9.9e-18 95.1 59 76.3
CARHR243360 Cardamine hirsuta HOM05D003324 ORTHO05D003957 1.3e-17 94.7 59 72.9
Thhalv10025471m.g Eutrema salsugineum HOM05D003324 ORTHO05D003957 1.3e-17 94.7 59 72.9
Medtr4g073010 Medicago truncatula HOM05D003324 ORTHO05D003957 1.3e-17 94.7 59 72.9
Rhsim11G0192300 Rhododendron simsii HOM05D003324 ORTHO05D003957 1.3e-17 94.7 59 71.2
TPR.G39252 Trifolium pratense HOM05D003324 ORTHO05D003957 1.3e-17 94.7 59 72.9
Ah.01g023030 Amaranthus hybridus HOM05D003324 ORTHO05D003957 1.7e-17 94.4 59 71.2
CDE09G0244 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 1.7e-17 94.4 59 71.2
SMO143G0242 Selaginella moellendorffii HOM05D003324 ORTHO05D003957 1.7e-17 94.4 57 71.9
CSS0036312 Camellia sinensis var. sinensis HOM05D003324 ORTHO05D003957 2.2e-17 94.0 58 72.4
Zm00001eb004310 Zea mays HOM05D003324 ORTHO05D003957 2.2e-17 94.0 58 70.7
Hund06438 Selenicereus undatus HOM05D003324 ORTHO05D003957 2.9e-17 93.6 59 69.5
SEGI_35537 Sequoiadendron giganteum HOM05D003324 ORTHO05D003957 2.9e-17 93.6 72 62.5
BcaB03g11792 Brassica carinata HOM05D003324 ORTHO05D003957 3.8e-17 93.2 59 71.2
CDE02G1043 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 4.9e-17 92.8 59 69.5
Dinv41937 Davidia involucrata HOM05D003324 ORTHO05D003957 4.9e-17 92.8 59 71.2
BcaNung00631 Brassica carinata HOM05D003324 ORTHO05D003957 6.4e-17 92.4 55 74.5
A01p03480 Brassica napus HOM05D003324 ORTHO05D003957 6.4e-17 92.4 55 74.5
C01p03780 Brassica napus HOM05D003324 ORTHO05D003957 6.4e-17 92.4 55 74.5
C03p85190 Brassica napus HOM05D003324 ORTHO05D003957 6.4e-17 92.4 59 69.5
BolC1t00370H Brassica oleracea HOM05D003324 ORTHO05D003957 6.4e-17 92.4 55 74.5
BraA01t00334Z Brassica rapa HOM05D003324 ORTHO05D003957 6.4e-17 92.4 55 74.5
AL7G16140 Arabidopsis lyrata HOM05D003324 ORTHO05D003957 8.4e-17 92.0 59 69.5
AT4G35080 Arabidopsis thaliana HOM05D003324 ORTHO05D003957 8.4e-17 92.0 59 69.5
Lalb_Chr03g0025201 Lupinus albus HOM05D003324 ORTHO05D003957 8.4e-17 92.0 59 72.9
CBR_g11222 Chara braunii HOM05D003324 ORTHO05D003957 1.1e-16 91.7 58 70.7
Sabra04G0117600 Salix brachista HOM05D003324 ORTHO05D003957 1.1e-16 91.7 59 69.5
unitig_52.g17371 Utricularia gibba HOM05D003324 ORTHO05D003957 1.1e-16 91.7 58 69.0
CANSAT25G2807 Cannabis sativa HOM05D003324 ORTHO05D003957 1.4e-16 91.3 59 71.2
PSO541G2776 Papaver somniferum HOM05D003324 ORTHO05D003957 1.4e-16 91.3 56 76.8
PSO675G7870 Papaver somniferum HOM05D003324 ORTHO05D003957 1.4e-16 91.3 56 76.8
Carub.0007s0523 Capsella rubella HOM05D003324 ORTHO05D003957 1.9e-16 90.9 55 72.7
Manes.04G076200 Manihot esculenta HOM05D003324 ORTHO05D003957 2.4e-16 90.5 58 70.7
AagrBONN_evm.TU.Sc2ySwM_117.406 Anthoceros agrestis HOM05D003324 ORTHO05D003957 7.1e-16 89.0 60 65.0
CDE02G1779 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 9.3e-16 88.6 59 66.1
Actinidia00625 Actinidia chinensis HOM05D003324 ORTHO05D003957 1.6e-15 87.8 53 73.6
Pp3c3_4090 Physcomitrium patens HOM05D003324 ORTHO05D003957 2.7e-15 87.0 56 69.6
Pp3c13_7910 Physcomitrium patens HOM05D003324 ORTHO05D003957 3.5e-15 86.7 56 69.6
SHI33188 Sapria himalayana HOM05D003324 ORTHO05D003957 3.5e-15 86.7 69 56.5
Pp3c26_12100 Physcomitrium patens HOM05D003324 ORTHO05D003957 1.3e-14 84.7 54 70.4
Pp3c4_29830 Physcomitrium patens HOM05D003324 ORTHO05D003957 6.6e-14 82.4 56 62.5
CDE02G4140 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 3.3e-13 80.1 59 64.4
SMO356G0654 Selaginella moellendorffii HOM05D003324 ORTHO05D003957 7.3e-13 79.0 54 66.7
SEGI_35861 Sequoiadendron giganteum HOM05D003324 ORTHO05D384267 3.6e-12 76.6 73 86.3
MCO03G400 Micromonas commoda HOM05D003324 ORTHO05D005934 3.1e-11 73.6 58 51.7
CBR_g20320 Chara braunii HOM05D003324 ORTHO05D003957 9.0e-11 72.0 55 58.2
Cre14.g629650 Chlamydomonas reinhardtii HOM05D003324 ORTHO05D003957 9.9e-10 68.6 69 47.8
CDE04G3720 Ceratophyllum demersum HOM05D003324 ORTHO05D003957 2.2e-09 67.4 45 66.7
PRCOL_00002310 Prasinoderma coloniale HOM05D003324 ORTHO05D005934 4.9e-09 66.2 49 61.2
Actinidia20513 Actinidia chinensis HOM05D003324 ORTHO05D003957 1.4e-08 64.7 60 55.0
BcaC01g00850 Brassica carinata HOM05D003324 ORTHO05D003957 2.1e-07 60.8 34 79.4


User provided reference genes

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