Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.4e-50 202.6 100 100.0
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 6.0e-33 144.1 94 71.3
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 3.0e-32 141.7 94 69.1
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 5.6e-31 137.5 95 66.3
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 7.3e-31 137.1 94 67.0
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.3e-30 136.3 92 67.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.1e-30 135.6 92 66.3
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.8e-30 135.2 95 65.3
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 3.6e-30 134.8 95 66.3
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 4.8e-30 134.4 91 64.8
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 8.1e-30 133.7 92 64.1
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.1e-29 133.3 92 66.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.1e-29 133.3 82 73.2
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.4e-29 132.9 95 64.2
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.4e-29 132.9 97 64.9
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.8e-29 132.5 92 66.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.8e-29 132.5 91 62.6
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-29 132.5 91 62.6
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-29 132.5 91 62.6
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.8e-29 132.5 86 67.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.4e-29 132.1 98 62.2
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 2.4e-29 132.1 95 65.3
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 3.1e-29 131.7 91 64.8
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 4.0e-29 131.3 86 66.3
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 5.3e-29 131.0 95 63.2
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 6.9e-29 130.6 93 64.5
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 6.9e-29 130.6 92 64.1
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 6.9e-29 130.6 92 64.1
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 9.0e-29 130.2 90 66.7
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.2e-28 129.8 91 65.9
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.2e-28 129.8 92 62.0
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.2e-28 129.8 91 64.8
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.2e-28 129.8 91 61.5
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.5e-28 129.4 94 60.6
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.5e-28 129.4 92 63.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.5e-28 129.4 96 62.5
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.5e-28 129.4 97 60.8
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.5e-28 129.4 101 63.4
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 2.0e-28 129.0 91 61.5
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.6e-28 128.6 96 64.6
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 2.6e-28 128.6 82 67.1
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.6e-28 128.6 93 61.3
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.4e-28 128.3 89 60.7
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.4e-28 128.3 89 60.7
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 3.4e-28 128.3 89 60.7
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 3.4e-28 128.3 93 64.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 3.4e-28 128.3 91 62.6
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.4e-28 127.9 87 65.5
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 4.4e-28 127.9 92 64.1
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 4.4e-28 127.9 93 63.4
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 4.4e-28 127.9 91 60.4
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 5.8e-28 127.5 95 65.3
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 5.8e-28 127.5 83 67.5
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 7.6e-28 127.1 93 62.4
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 9.9e-28 126.7 93 61.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 9.9e-28 126.7 89 64.0
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 9.9e-28 126.7 92 64.1
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 9.9e-28 126.7 93 62.4
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.3e-27 126.3 94 62.8
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.7e-27 125.9 92 62.0
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.7e-27 125.9 82 69.5
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.7e-27 125.9 90 63.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.2e-27 125.6 95 64.2
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.2e-27 125.6 89 64.0
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 2.2e-27 125.6 91 62.6
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 2.9e-27 125.2 93 59.1
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.9e-27 125.2 92 65.2
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 3.8e-27 124.8 93 63.4
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.8e-27 124.8 91 60.4
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 3.8e-27 124.8 94 59.6
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 3.8e-27 124.8 92 60.9
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 3.8e-27 124.8 92 59.8
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 4.9e-27 124.4 88 63.6
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 6.4e-27 124.0 91 60.4
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 6.4e-27 124.0 83 71.1
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.1e-26 123.2 88 63.6
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 59.3
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 59.3
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 59.3
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.4e-26 122.9 91 59.3
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.4e-26 122.9 93 61.3
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.4e-26 122.1 93 61.3
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.4e-26 122.1 101 56.4
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.2e-26 121.7 78 71.8
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.2e-26 121.7 91 58.2
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 4.2e-26 121.3 95 61.1
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 9.3e-26 120.2 112 53.6
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.2e-25 119.8 86 61.6
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.6e-25 119.4 88 62.5
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.6e-25 119.4 82 64.6
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 4.6e-25 117.9 88 62.5
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 6.0e-25 117.5 92 65.2
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 6.0e-25 117.5 76 69.7
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.0e-24 116.7 88 61.4
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-24 116.3 82 64.6
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.3e-24 115.5 88 61.4
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.3e-24 115.5 88 61.4
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 3.9e-24 114.8 98 54.1
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.5e-23 112.8 77 68.8
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.3e-23 111.7 78 64.1
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 5.6e-23 110.9 89 62.9
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.1e-22 109.0 82 62.2
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 8.1e-22 107.1 79 62.0
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 6.9e-21 104.0 68 69.1
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 2.0e-20 102.4 91 56.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 2.6e-20 102.1 84 58.3
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 3.2e-18 95.1 87 55.2
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.2e-17 93.2 62 64.5
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-16 89.4 88 51.1
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.9e-15 85.9 67 59.7
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 9.6e-15 83.6 82 47.6
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.0e-11 73.6 80 48.8
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.3e-11 73.2 82 45.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.5e-09 65.1 46 56.5
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.0e-08 62.0 110 36.4
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 5.1e-08 61.2 64 48.4
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.3e-07 58.5 38 57.9
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 5.7e-07 57.8 75 41.3


User provided reference genes

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