Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16329 Sequoiadendron giganteum HOM05D032102 ORTHO05D037594 2.6e-115 418.7 210 100.0
SEGI_09719 Sequoiadendron giganteum HOM05D032102 ORTHO05D037594 1.1e-100 370.2 186 100.0
SEGI_00688 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 5.4e-92 341.3 186 91.4
SEGI_30122 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 5.4e-92 341.3 186 91.4
SEGI_36253 Sequoiadendron giganteum HOM05D032102 ORTHO05D037594 1.2e-19 100.9 53 90.6
DCAR_005966 Daucus carota HOM05D000475 ORTHO05D000343 1.1e-07 61.2 75 45.3
PGSC0003DMG400025658 Solanum tuberosum HOM05D004848 ORTHO05D000343 1.8e-07 60.5 60 50.0
Nitab4.5_0007533g0020 Nicotiana tabacum HOM05D004848 ORTHO05D000343 3.1e-07 59.7 59 52.5
Nitab4.5_0001288g0210 Nicotiana tabacum HOM05D004848 ORTHO05D000343 5.3e-07 58.9 69 47.8
Peaxi162Scf00149g00048 Petunia axillaris HOM05D004848 ORTHO05D000343 5.3e-07 58.9 68 48.5
CAN.G149.32 Capsicum annuum HOM05D000475 ORTHO05D000343 7.0e-07 58.5 69 46.4
Cc09_g06060 Coffea canephora HOM05D000475 ORTHO05D000343 9.1e-07 58.2 48 56.2
SEGI_12390 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 9.1e-07 58.2 48 58.3
Actinidia22398 Actinidia chinensis HOM05D000475 ORTHO05D000343 1.2e-06 57.8 50 52.0
CAN.G358.73 Capsicum annuum HOM05D004848 ORTHO05D000343 1.2e-06 57.8 60 48.3
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 1.2e-06 57.8 60 48.3
MSTRG.21214 Avicennia marina HOM05D000475 ORTHO05D000343 2.6e-06 56.6 51 52.9
Hma1.2p1_0615F.1_g189900 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 2.6e-06 56.6 50 54.0
Lalb_Chr25g0284711 Lupinus albus HOM05D000475 ORTHO05D000343 3.5e-06 56.2 65 40.0
Dinv12934 Davidia involucrata HOM05D000475 ORTHO05D000343 4.5e-06 55.8 77 42.9
Migut.D02086 Erythranthe guttata HOM05D000475 ORTHO05D000343 4.5e-06 55.8 75 40.0
SGA_v2.0_scaffold41G15694 Striga asiatica HOM05D000475 ORTHO05D000343 4.5e-06 55.8 73 42.5
Cc01_g20170 Coffea canephora HOM05D000475 ORTHO05D000343 5.9e-06 55.5 99 41.4
vmacro03522 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 5.9e-06 55.5 50 52.0
Ah.15g097520 Amaranthus hybridus HOM05D000475 ORTHO05D000343 7.7e-06 55.1 48 50.0
CsaV3_2G004580 Cucumis sativus L. HOM05D000475 ORTHO05D000343 7.7e-06 55.1 48 56.2
CsaV3_2G004710 Cucumis sativus L. HOM05D000475 ORTHO05D000343 7.7e-06 55.1 48 56.2
Lsat_1_v5_gn_2_63821 Lactuca sativa HOM05D000475 ORTHO05D000343 7.7e-06 55.1 54 51.9
Rhsim13G0133100 Rhododendron simsii HOM05D000475 ORTHO05D000343 7.7e-06 55.1 50 52.0
SEGI_22052 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 7.7e-06 55.1 58 48.3


User provided reference genes

Program Settings