Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 1.0e-107 393.3 184 100.0
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 8.1e-60 234.2 139 75.5
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 1.4e-59 233.4 150 74.0
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 6.9e-59 231.1 138 76.1
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 3.4e-58 228.8 138 75.4
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 3.4e-58 228.8 139 76.3
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 5.8e-58 228.0 153 69.3
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 7.6e-58 227.6 138 73.2
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 1.7e-57 226.5 138 75.4
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 2.2e-57 226.1 139 71.9
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 2.9e-57 225.7 172 64.0
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 3.8e-57 225.3 140 73.6
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 6.4e-57 224.6 138 74.6
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 8.4e-57 224.2 139 75.5
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 1.1e-56 223.8 139 69.8
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 1.1e-56 223.8 171 63.7
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 1.1e-56 223.8 153 68.0
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 1.4e-56 223.4 153 69.3
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 1.4e-56 223.4 138 72.5
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 1.9e-56 223.0 153 68.6
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 2.4e-56 222.6 138 73.2
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 2.4e-56 222.6 138 73.2
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 2.4e-56 222.6 138 73.2
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 3.2e-56 222.2 147 70.1
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 3.2e-56 222.2 139 73.4
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 3.2e-56 222.2 138 73.9
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 4.2e-56 221.9 138 71.7
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 4.2e-56 221.9 153 67.3
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 4.2e-56 221.9 138 73.2
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 5.4e-56 221.5 139 69.1
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 5.4e-56 221.5 153 66.0
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 5.4e-56 221.5 138 73.2
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 5.4e-56 221.5 138 72.5
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 7.1e-56 221.1 138 72.5
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 9.3e-56 220.7 140 72.9
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 1.2e-55 220.3 138 71.7
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 1.2e-55 220.3 139 72.7
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 1.2e-55 220.3 136 72.8
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 2.1e-55 219.5 138 73.2
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 2.1e-55 219.5 138 73.2
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 2.1e-55 219.5 139 71.9
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 2.7e-55 219.2 138 71.7
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 3.5e-55 218.8 138 70.3
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 3.5e-55 218.8 153 67.3
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 4.6e-55 218.4 138 71.7
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 6.0e-55 218.0 138 71.7
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 6.0e-55 218.0 138 72.5
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 6.0e-55 218.0 153 64.1
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 6.0e-55 218.0 153 65.4
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 6.0e-55 218.0 139 72.7
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 7.9e-55 217.6 149 69.1
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 7.9e-55 217.6 139 71.2
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 7.9e-55 217.6 138 72.5
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 7.9e-55 217.6 153 64.7
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 7.9e-55 217.6 153 64.7
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 1.0e-54 217.2 153 66.0
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 1.0e-54 217.2 161 64.0
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.3e-54 216.9 138 72.5
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 1.3e-54 216.9 138 70.3
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 2.3e-54 216.1 138 72.5
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 2.3e-54 216.1 140 70.0
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 3.0e-54 215.7 140 69.3
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 3.0e-54 215.7 153 66.0
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 3.0e-54 215.7 138 71.7
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 3.9e-54 215.3 150 64.7
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 6.6e-54 214.5 139 69.1
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 6.6e-54 214.5 139 69.8
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 8.7e-54 214.2 139 70.5
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 1.1e-53 213.8 153 65.4
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 1.5e-53 213.4 140 68.6
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 1.5e-53 213.4 153 67.3
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 2.5e-53 212.6 139 69.8
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 3.3e-53 212.2 151 66.2
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 5.6e-53 211.5 139 70.5
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 1.3e-52 210.3 138 69.6
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.3e-52 210.3 138 69.6
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 1.6e-52 209.9 139 69.8
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 6.2e-52 208.0 153 64.1
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 1.4e-51 206.8 153 64.1
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 1.4e-51 206.8 153 64.1
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.4e-51 206.8 138 68.1
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 3.1e-51 205.7 155 61.3
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 3.1e-51 205.7 138 68.1
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 3.1e-51 205.7 153 63.4
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 3.1e-51 205.7 153 63.4
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 3.1e-51 205.7 153 63.4
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 6.9e-51 204.5 153 63.4
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 6.9e-51 204.5 142 69.0
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.2e-50 203.8 149 63.1
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 1.5e-50 203.4 161 59.6
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 2.0e-50 203.0 178 56.2
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 3.4e-50 202.2 142 64.8
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 4.5e-50 201.8 153 62.7
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 9.9e-50 200.7 139 64.7
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 9.9e-50 200.7 153 60.8
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 1.7e-49 199.9 142 64.8
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 1.7e-49 199.9 142 64.8
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 2.2e-49 199.5 142 64.8
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 2.9e-49 199.1 137 67.2
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 2.9e-49 199.1 139 65.5
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 1.1e-48 197.2 153 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 1.9e-48 196.4 139 65.5
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 6.0e-47 191.4 139 62.6
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 3.9e-46 188.7 177 53.1
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 4.0e-43 178.7 128 64.8
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 5.5e-40 168.3 105 73.3
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 5.5e-40 168.3 107 70.1
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 2.7e-39 166.0 148 56.1
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 7.9e-39 164.5 107 68.2
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 3.9e-38 162.2 102 72.5
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 2.5e-37 159.5 108 68.5
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.2e-34 150.6 104 68.3
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.5e-34 150.2 102 68.6
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.5e-34 150.2 139 57.6
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 5.1e-30 135.2 102 65.7
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 9.7e-29 131.0 107 56.1
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 2.6e-26 122.9 138 41.3
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 9.7e-21 104.4 135 37.8
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 7.2e-16 88.2 113 46.9
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 1.8e-11 73.6 137 35.0
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 6.5e-09 65.1 33 84.8
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 1.2e-07 60.8 34 67.6
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 1.6e-07 60.5 70 47.1


User provided reference genes

Program Settings