Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.1e-198 696.4 345 100.0
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.6e-62 242.3 306 41.5
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 8.3e-58 228.4 243 46.1
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 2.4e-57 226.9 308 42.2
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 1.2e-56 224.6 302 40.4
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.7e-55 220.7 324 38.3
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 2.3e-55 220.3 306 39.5
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 6.6e-55 218.8 306 39.9
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 1.1e-54 218.0 308 40.6
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.5e-54 217.6 310 39.7
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.5e-54 217.6 302 40.4
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.5e-54 217.6 315 39.0
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.5e-54 217.6 311 38.3
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 3.3e-54 216.5 306 38.9
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 3.3e-54 216.5 308 39.3
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 3.3e-54 216.5 301 40.2
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 4.3e-54 216.1 309 39.5
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 5.6e-54 215.7 298 39.9
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 5.6e-54 215.7 305 38.0
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 7.3e-54 215.3 316 38.3
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 7.3e-54 215.3 309 39.5
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 1.6e-53 214.2 310 40.0
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 1.6e-53 214.2 310 40.3
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 1.6e-53 214.2 308 39.6
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 1.6e-53 214.2 309 40.5
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 2.1e-53 213.8 308 39.0
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 2.1e-53 213.8 308 38.6
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 2.1e-53 213.8 320 38.4
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 2.8e-53 213.4 311 39.9
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.8e-53 213.4 308 38.6
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 2.8e-53 213.4 308 39.0
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 3.6e-53 213.0 304 40.1
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 3.6e-53 213.0 306 39.5
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 6.2e-53 212.2 309 39.8
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 8.1e-53 211.8 318 38.4
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.1e-52 211.5 308 39.0
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.4e-52 211.1 307 38.8
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.4e-52 211.1 307 38.8
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.8e-52 210.7 318 38.7
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.8e-52 210.7 312 39.4
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 4.0e-52 209.5 308 38.6
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 6.8e-52 208.8 317 39.1
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 6.8e-52 208.8 309 38.8
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 8.9e-52 208.4 314 38.2
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 8.9e-52 208.4 315 39.0
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 8.9e-52 208.4 313 38.3
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 8.9e-52 208.4 319 36.7
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.2e-51 208.0 308 38.3
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 1.2e-51 208.0 310 38.7
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.2e-51 208.0 257 41.2
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.5e-51 207.6 316 38.3
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 1.5e-51 207.6 305 39.7
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.5e-51 207.6 308 38.3
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 3.4e-51 206.5 311 37.6
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 3.4e-51 206.5 337 36.8
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 4.4e-51 206.1 302 39.1
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 4.4e-51 206.1 308 39.0
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 4.4e-51 206.1 314 37.9
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 4.4e-51 206.1 326 36.8
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 7.6e-51 205.3 317 38.2
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 7.6e-51 205.3 323 37.8
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 7.6e-51 205.3 323 38.1
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 7.6e-51 205.3 318 38.4
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 7.6e-51 205.3 315 37.8
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 7.6e-51 205.3 279 40.5
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 1.3e-50 204.5 301 38.2
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 1.3e-50 204.5 307 37.8
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.3e-50 204.5 301 39.2
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 1.7e-50 204.1 311 38.9
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 1.7e-50 204.1 322 37.3
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 2.2e-50 203.8 300 37.0
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 2.9e-50 203.4 312 35.6
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 2.9e-50 203.4 316 38.9
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 4.9e-50 202.6 310 37.7
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 6.4e-50 202.2 313 37.4
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 6.4e-50 202.2 311 36.0
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 6.4e-50 202.2 303 38.9
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 6.4e-50 202.2 339 36.3
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 6.4e-50 202.2 252 43.7
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 6.4e-50 202.2 307 37.5
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 8.4e-50 201.8 311 36.3
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 8.4e-50 201.8 313 38.7
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 1.4e-49 201.1 313 36.4
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 1.4e-49 201.1 308 38.0
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 1.9e-49 200.7 314 36.3
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 2.4e-49 200.3 315 38.1
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 2.4e-49 200.3 310 38.1
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 3.2e-49 199.9 312 37.2
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 3.2e-49 199.9 250 40.0
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 4.1e-49 199.5 313 35.8
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 4.1e-49 199.5 313 35.8
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 5.4e-49 199.1 313 35.8
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 5.4e-49 199.1 324 37.0
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 7.1e-49 198.7 313 36.1
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 7.1e-49 198.7 311 37.0
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 1.2e-48 198.0 313 35.8
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 1.2e-48 198.0 313 38.7
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.1e-48 197.2 323 37.2
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 2.1e-48 197.2 308 36.0
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 2.7e-48 196.8 307 38.1
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 3.5e-48 196.4 314 36.3
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 4.6e-48 196.1 307 35.8
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 4.6e-48 196.1 250 39.6
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 6.0e-48 195.7 318 36.2
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 6.0e-48 195.7 253 43.5
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 1.0e-47 194.9 315 35.2
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 1.3e-47 194.5 314 35.7
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.3e-47 194.5 323 36.2
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 1.3e-47 194.5 315 36.2
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.0e-47 193.4 256 40.2
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 3.9e-47 193.0 315 35.2
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 3.9e-47 193.0 314 35.0
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 5.1e-47 192.6 314 34.7
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 6.6e-47 192.2 314 35.7
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 6.6e-47 192.2 314 35.7
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 1.9e-46 190.7 262 38.9
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 3.3e-46 189.9 248 42.3
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 4.3e-46 189.5 315 34.6
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 5.6e-46 189.1 315 34.9
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 1.2e-45 188.0 287 37.3
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 2.8e-45 186.8 253 39.9
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 4.7e-45 186.0 253 40.7
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 1.1e-44 184.9 265 38.9
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.5e-43 181.0 310 34.8
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 2.6e-43 180.3 285 36.1
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 5.8e-43 179.1 296 36.1
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 8.4e-42 175.3 308 34.7
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 6.6e-39 165.6 167 49.7
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.9e-38 164.1 314 33.1
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 7.3e-38 162.2 219 41.1
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 7.3e-38 162.2 138 54.3
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 1.1e-36 158.3 298 32.6
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 4.0e-36 156.4 133 52.6
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 8.4e-34 148.7 124 52.4
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 2.8e-29 133.7 108 56.5
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 3.8e-26 123.2 125 47.2
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 2.4e-20 104.0 135 40.7
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.5e-19 101.3 101 48.5
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 4.5e-19 99.8 219 34.2
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 4.3e-14 83.2 85 48.2
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-11 73.9 90 41.1
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.4e-11 73.6 273 26.7
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 7.6e-11 72.4 81 40.7
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.9e-09 67.8 107 32.7
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 3.0e-07 60.5 60 45.0
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 6.7e-07 59.3 83 37.3
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.9e-06 57.8 144 29.2
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 3.3e-06 57.0 107 27.1


User provided reference genes

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