Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 3.7e-90 334.7 155 100.0
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 4.2e-41 171.8 98 74.5
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 1.0e-39 167.2 98 71.4
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 1.3e-39 166.8 105 68.6
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 2.3e-39 166.0 98 71.4
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 3.0e-39 165.6 99 68.7
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 5.1e-39 164.9 97 72.2
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 5.1e-39 164.9 98 71.4
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 6.6e-39 164.5 98 71.4
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 8.7e-39 164.1 104 68.3
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 1.1e-38 163.7 98 69.4
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.5e-38 163.3 98 69.4
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 1.9e-38 162.9 92 76.1
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 1.9e-38 162.9 98 70.4
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 1.9e-38 162.9 98 70.4
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 2.5e-38 162.5 99 69.7
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 2.5e-38 162.5 92 76.1
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 2.5e-38 162.5 98 69.4
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 3.3e-38 162.2 92 75.0
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 4.3e-38 161.8 92 75.0
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 4.3e-38 161.8 92 75.0
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 4.3e-38 161.8 92 75.0
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 4.3e-38 161.8 106 67.0
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 4.3e-38 161.8 98 69.4
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 4.3e-38 161.8 100 70.0
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 5.6e-38 161.4 98 70.4
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 5.6e-38 161.4 98 69.4
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 5.6e-38 161.4 104 65.4
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 5.6e-38 161.4 98 69.4
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 5.6e-38 161.4 92 76.1
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 7.3e-38 161.0 98 68.4
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 7.3e-38 161.0 92 75.0
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 7.3e-38 161.0 98 70.4
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 9.6e-38 160.6 92 75.0
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 9.6e-38 160.6 92 76.1
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 9.6e-38 160.6 92 75.0
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 9.6e-38 160.6 92 73.9
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 9.6e-38 160.6 98 69.4
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 1.3e-37 160.2 92 75.0
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 1.3e-37 160.2 98 70.4
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 1.3e-37 160.2 98 69.4
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 1.3e-37 160.2 92 73.9
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 1.3e-37 160.2 92 76.1
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 1.3e-37 160.2 92 77.2
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.6e-37 159.8 104 66.3
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.6e-37 159.8 104 64.4
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 1.6e-37 159.8 99 69.7
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 1.6e-37 159.8 98 69.4
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 1.6e-37 159.8 98 69.4
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 2.1e-37 159.5 104 66.3
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 2.1e-37 159.5 104 66.3
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 2.1e-37 159.5 98 67.3
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 2.1e-37 159.5 98 69.4
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 2.8e-37 159.1 98 67.3
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.8e-37 159.1 104 63.5
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.8e-37 159.1 104 63.5
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 2.8e-37 159.1 92 76.1
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 3.6e-37 158.7 98 69.4
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 3.6e-37 158.7 104 66.3
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 3.6e-37 158.7 98 70.4
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 3.6e-37 158.7 99 68.7
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 3.6e-37 158.7 104 64.4
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 3.6e-37 158.7 98 69.4
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 4.8e-37 158.3 92 75.0
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 4.8e-37 158.3 92 72.8
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 4.8e-37 158.3 104 66.3
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 4.8e-37 158.3 98 67.3
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 6.2e-37 157.9 104 65.4
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 6.2e-37 157.9 92 71.7
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 6.2e-37 157.9 98 69.4
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 6.2e-37 157.9 98 69.4
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 6.2e-37 157.9 98 67.3
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 6.2e-37 157.9 98 67.3
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.1e-36 157.1 98 69.4
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.1e-36 157.1 98 69.4
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 1.1e-36 157.1 104 62.5
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 1.1e-36 157.1 98 68.4
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 1.4e-36 156.8 98 69.4
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 1.4e-36 156.8 104 62.5
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 1.4e-36 156.8 98 68.4
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 1.8e-36 156.4 92 71.7
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 1.8e-36 156.4 92 72.8
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 2.4e-36 156.0 104 63.5
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 2.4e-36 156.0 92 72.8
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 3.1e-36 155.6 98 67.3
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 3.1e-36 155.6 98 66.3
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 6.9e-36 154.5 98 67.3
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 6.9e-36 154.5 104 63.5
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 6.9e-36 154.5 104 63.5
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 6.9e-36 154.5 104 63.5
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 6.9e-36 154.5 98 68.4
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 9.0e-36 154.1 99 65.7
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 3.4e-35 152.1 92 69.6
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 4.5e-35 151.8 92 71.7
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 2.2e-34 149.4 98 63.3
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 3.8e-34 148.7 109 60.6
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 3.8e-34 148.7 99 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 6.4e-34 147.9 93 65.6
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.7e-32 142.5 92 65.2
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 1.0e-31 140.6 102 56.9
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.1e-30 137.1 92 62.0
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 2.1e-29 132.9 80 71.2
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 2.1e-29 132.9 80 71.2
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.8e-29 132.5 86 62.8
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 1.3e-26 123.6 91 62.6
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 1.7e-26 123.2 98 55.1
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.9e-25 119.8 96 54.2
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 9.6e-22 107.5 96 50.0
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 2.1e-21 106.3 85 61.2
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 3.1e-20 102.4 98 50.0
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 3.8e-18 95.5 63 63.5
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 3.8e-18 95.5 63 63.5
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.4e-12 77.0 98 40.8
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 7.7e-11 71.2 34 82.4
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.1e-09 67.4 94 42.6


User provided reference genes

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