Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 4.8e-91 337.8 170 100.0
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 1.9e-31 139.8 90 72.2
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 1.2e-30 137.1 90 72.2
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.6e-30 136.7 90 71.1
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.6e-30 136.7 90 71.1
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.1e-30 136.3 90 72.2
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.1e-30 136.3 90 72.2
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 3.6e-30 135.6 90 72.2
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 4.7e-30 135.2 90 71.1
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 4.7e-30 135.2 90 71.1
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 6.2e-30 134.8 90 70.0
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 8.1e-30 134.4 90 70.0
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 8.1e-30 134.4 90 71.1
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 1.1e-29 134.0 90 67.8
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 1.1e-29 134.0 90 70.0
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.1e-29 134.0 90 71.1
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 1.1e-29 134.0 89 66.3
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.8e-29 133.3 90 68.9
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 1.8e-29 133.3 90 68.9
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.8e-29 133.3 89 69.7
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 2.3e-29 132.9 90 68.9
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 2.3e-29 132.9 90 66.7
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 3.1e-29 132.5 104 60.6
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 3.1e-29 132.5 90 68.9
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 3.1e-29 132.5 89 68.5
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 5.2e-29 131.7 88 65.9
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 5.2e-29 131.7 90 67.8
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 6.8e-29 131.3 90 67.8
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 6.8e-29 131.3 90 66.7
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 8.9e-29 131.0 90 67.8
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 8.9e-29 131.0 90 67.8
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 8.9e-29 131.0 90 67.8
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.2e-28 130.6 90 64.4
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 1.2e-28 130.6 90 66.7
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.2e-28 130.6 90 67.8
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 1.2e-28 130.6 90 67.8
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 1.2e-28 130.6 90 67.8
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.2e-28 130.6 88 68.2
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 2.0e-28 129.8 90 67.8
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 2.0e-28 129.8 90 67.8
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 2.0e-28 129.8 90 68.9
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 2.0e-28 129.8 90 66.7
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 2.6e-28 129.4 90 66.7
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 2.6e-28 129.4 90 65.6
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 2.6e-28 129.4 90 68.9
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 2.6e-28 129.4 90 67.8
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 2.6e-28 129.4 89 65.2
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 3.4e-28 129.0 90 65.6
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 3.4e-28 129.0 90 67.8
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 3.4e-28 129.0 90 67.8
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 3.4e-28 129.0 90 67.8
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 4.4e-28 128.6 90 65.6
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 4.4e-28 128.6 90 66.7
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 4.4e-28 128.6 90 68.9
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 4.4e-28 128.6 90 68.9
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 4.4e-28 128.6 90 65.6
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 4.4e-28 128.6 90 64.4
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 4.4e-28 128.6 89 65.2
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 4.4e-28 128.6 89 65.2
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 5.8e-28 128.3 98 60.2
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 7.6e-28 127.9 90 65.6
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 7.6e-28 127.9 90 65.6
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 7.6e-28 127.9 90 65.6
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 7.6e-28 127.9 90 67.8
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 9.9e-28 127.5 89 62.9
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 9.9e-28 127.5 90 64.4
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 64.4
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 65.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 66.7
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 68.9
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 65.6
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 65.6
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.7e-27 126.7 90 64.4
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 1.7e-27 126.7 90 64.4
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 1.7e-27 126.7 90 64.4
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 1.7e-27 126.7 90 64.4
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.2e-27 126.3 90 65.6
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 2.2e-27 126.3 90 64.4
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.2e-27 126.3 90 67.8
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 2.2e-27 126.3 90 64.4
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 2.2e-27 126.3 88 65.9
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 2.2e-27 126.3 90 63.3
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.9e-27 125.9 90 62.2
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 2.9e-27 125.9 88 64.8
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 4.9e-27 125.2 87 66.7
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 6.4e-27 124.8 90 64.4
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 6.4e-27 124.8 90 63.3
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.4e-27 124.8 90 63.3
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.4e-27 124.8 90 63.3
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 6.4e-27 124.8 89 64.0
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.4e-27 124.4 90 66.7
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 1.4e-26 123.6 90 63.3
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.4e-26 123.6 90 67.8
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.4e-26 123.6 90 63.3
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 3.2e-26 122.5 90 65.6
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 9.2e-26 120.9 94 61.7
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 9.2e-26 120.9 90 62.2
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 1.2e-25 120.6 90 64.4
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 3.5e-25 119.0 93 61.3
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.0e-24 117.5 87 58.6
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.0e-24 117.5 98 58.2
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 1.3e-24 117.1 90 64.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.3e-24 117.1 87 58.6
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 8.6e-24 114.4 89 62.9
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.5e-23 112.8 97 57.7
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 7.3e-23 111.3 90 61.1
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-22 110.5 80 65.0
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 2.8e-22 109.4 89 58.4
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 4.7e-22 108.6 108 54.6
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 8.9e-21 104.4 87 54.0
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.2e-20 104.0 73 64.4
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 5.8e-20 101.7 88 53.4
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 5.8e-20 101.7 93 58.1
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 9.9e-20 100.9 86 51.2
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 1.3e-19 100.5 72 62.5
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.7e-19 100.1 69 68.1
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 2.2e-19 99.8 70 67.1
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.9e-19 99.4 70 67.1
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 4.9e-19 98.6 92 52.2
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.4e-18 97.1 72 56.9
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.4e-18 96.3 63 71.4
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 9.3e-18 94.4 63 68.3
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 9.3e-18 94.4 63 68.3
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 2.5e-15 86.3 65 60.0
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 8.1e-14 81.3 79 53.2


User provided reference genes

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