Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 2.1e-230 802.0 393 100.0
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.0e-136 490.7 377 61.3
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.6e-134 483.4 368 60.9
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 5.8e-132 474.9 371 60.4
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.9e-130 469.9 376 59.6
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 7.1e-130 468.0 376 59.3
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.1e-129 466.5 377 58.4
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.3e-128 463.0 377 56.0
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.3e-128 463.0 377 56.0
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.1e-127 460.7 377 57.0
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 1.9e-127 459.9 377 55.2
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 5.6e-127 458.4 371 56.6
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 7.4e-127 458.0 371 58.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 8.1e-126 454.5 377 54.9
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.4e-125 453.0 377 54.6
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 5.3e-125 451.8 373 56.3
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 5.3e-125 451.8 377 54.6
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.4e-124 449.1 379 55.9
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.0e-123 447.6 371 54.7
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.7e-123 446.8 374 56.4
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.4e-122 443.7 376 55.6
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 4.2e-122 442.2 396 53.0
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.6e-121 440.3 377 55.4
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.5e-121 439.1 378 55.0
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 6.0e-121 438.3 373 55.5
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.0e-120 437.6 373 54.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 8.7e-120 434.5 378 54.5
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.9e-119 433.3 373 54.4
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.9e-119 433.3 373 55.2
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 2.5e-119 433.0 371 55.0
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.5e-119 433.0 373 54.2
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 5.7e-119 431.8 378 54.0
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 7.4e-119 431.4 373 55.0
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 9.6e-119 431.0 376 54.8
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.3e-118 430.6 376 54.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 4.1e-117 425.6 375 54.1
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.2e-116 424.1 384 51.8
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 4.5e-116 422.2 372 53.5
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 5.9e-116 421.8 369 53.4
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 5.9e-116 421.8 373 55.0
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.7e-115 420.2 376 52.9
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.7e-115 420.2 372 52.2
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.7e-115 420.2 371 53.1
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.9e-115 419.5 376 52.7
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.8e-115 419.1 368 53.3
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.1e-114 417.5 379 54.1
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.9e-114 416.8 372 52.7
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 2.5e-114 416.4 377 52.5
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 2.5e-114 416.4 377 52.0
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 5.5e-114 415.2 419 49.4
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 9.3e-114 414.5 377 52.3
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.6e-113 413.7 377 52.3
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 2.1e-113 413.3 374 50.3
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 2.1e-113 413.3 375 53.3
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 2.1e-113 413.3 370 51.9
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 2.7e-113 412.9 370 53.8
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 2.7e-113 412.9 377 50.9
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 3.6e-113 412.5 381 53.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 6.1e-113 411.8 368 52.7
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.0e-112 411.0 374 51.9
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 8.7e-112 407.9 377 51.5
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.5e-111 407.1 369 51.8
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 1.5e-111 407.1 369 52.0
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.5e-111 407.1 372 51.9
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 4.3e-111 405.6 375 51.2
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 5.7e-111 405.2 373 52.8
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 7.4e-111 404.8 377 50.4
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 7.4e-111 404.8 371 52.8
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 9.7e-111 404.4 367 54.0
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.2e-110 403.3 378 51.3
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.2e-110 403.3 378 51.3
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.8e-110 402.9 368 53.0
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 3.7e-110 402.5 408 48.3
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 6.3e-110 401.7 368 51.9
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.1e-109 401.0 358 50.6
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.4e-109 400.6 374 54.0
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 6.9e-109 398.3 370 51.9
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.2e-108 397.5 378 48.7
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 3.4e-108 396.0 368 52.7
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 4.5e-108 395.6 361 54.6
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 5.0e-107 392.1 377 50.1
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 8.5e-107 391.3 349 53.6
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.5e-106 389.8 359 52.6
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 2.5e-106 389.8 353 56.1
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 9.4e-106 387.9 359 52.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.2e-105 387.5 368 51.1
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.7e-105 386.3 362 51.9
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.6e-105 385.6 373 49.6
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 2.3e-104 383.3 377 50.9
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.1e-103 380.9 373 50.7
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 4.4e-103 379.0 377 49.1
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.4e-101 373.2 379 49.6
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 3.1e-101 372.9 351 48.1
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.2e-100 370.9 400 48.5
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 1.2e-100 370.9 320 54.4
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 6.5e-99 365.2 377 50.1
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.7e-96 355.1 374 47.6
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 8.8e-96 354.8 368 48.1
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.5e-95 354.0 368 47.8
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 3.3e-95 352.8 297 56.9
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 4.4e-95 352.4 322 52.8
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 8.2e-86 321.6 301 52.2
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.1e-85 321.2 377 44.6
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 7.7e-84 315.1 284 54.6
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.3e-83 314.3 275 54.2
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 3.2e-82 309.7 287 53.3
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 4.2e-82 309.3 307 49.5
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.6e-81 307.4 390 38.5
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 2.7e-81 306.6 276 52.5
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.0e-80 304.7 255 56.1
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 3.0e-80 303.1 393 42.0
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.3e-70 271.2 336 42.9
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 3.3e-66 256.5 217 54.8
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 3.4e-63 246.5 186 60.2
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 6.4e-62 242.3 217 50.7
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.0e-51 208.4 193 51.3
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 7.1e-45 185.7 170 53.5
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 9.2e-37 158.7 146 51.4
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.3e-24 116.3 202 36.1
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 9.9e-23 112.1 110 45.5
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.2e-22 110.9 109 51.4
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 8.4e-22 109.0 131 48.1
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 3.9e-11 73.6 138 34.1
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 8.7e-11 72.4 78 44.9
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 1.5e-10 71.6 49 61.2


User provided reference genes

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