Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 3.1e-105 385.2 200 100.0
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 8.8e-52 207.6 124 79.8
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 1.5e-51 206.8 124 79.0
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 1.5e-51 206.8 124 79.0
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 2.0e-51 206.5 124 80.6
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 7.5e-51 204.5 124 79.8
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 9.8e-51 204.1 124 77.4
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 9.8e-51 204.1 124 79.0
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 9.8e-51 204.1 124 80.6
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 1.3e-50 203.8 124 77.4
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 2.2e-50 203.0 124 79.0
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 4.8e-50 201.8 132 74.2
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 4.8e-50 201.8 124 76.6
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 6.3e-50 201.4 124 78.2
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 6.3e-50 201.4 124 78.2
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 8.3e-50 201.1 124 76.6
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 1.1e-49 200.7 124 79.8
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 1.1e-49 200.7 122 77.0
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 1.4e-49 200.3 122 77.0
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 1.8e-49 199.9 122 77.0
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 2.4e-49 199.5 124 78.2
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 2.4e-49 199.5 124 74.2
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 2.4e-49 199.5 125 76.0
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 2.4e-49 199.5 124 76.6
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 3.1e-49 199.1 124 75.0
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 4.1e-49 198.7 124 76.6
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 4.1e-49 198.7 124 75.8
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 4.1e-49 198.7 124 75.0
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 9.1e-49 197.6 125 76.0
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 1.2e-48 197.2 124 73.4
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 1.2e-48 197.2 124 76.6
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 1.2e-48 197.2 124 76.6
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 1.2e-48 197.2 124 74.2
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.6e-48 196.8 129 74.4
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 1.6e-48 196.8 124 75.8
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 2.0e-48 196.4 124 76.6
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 3.5e-48 195.7 122 77.0
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 3.5e-48 195.7 124 74.2
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 3.5e-48 195.7 124 72.6
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 4.5e-48 195.3 124 75.0
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 5.9e-48 194.9 122 76.2
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 5.9e-48 194.9 124 75.0
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 5.9e-48 194.9 124 75.0
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 5.9e-48 194.9 124 75.8
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 5.9e-48 194.9 123 74.0
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 7.7e-48 194.5 150 67.3
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 1.0e-47 194.1 124 71.8
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 1.3e-47 193.7 124 75.0
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 1.3e-47 193.7 124 73.4
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 1.3e-47 193.7 124 74.2
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 1.3e-47 193.7 124 76.6
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 1.7e-47 193.4 124 75.8
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.7e-47 193.4 124 73.4
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 1.7e-47 193.4 124 73.4
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 2.3e-47 193.0 124 75.0
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 2.3e-47 193.0 124 75.8
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 2.3e-47 193.0 125 72.0
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 2.9e-47 192.6 124 72.6
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 2.9e-47 192.6 124 75.0
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 2.9e-47 192.6 123 73.2
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 2.9e-47 192.6 124 74.2
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.8e-47 192.2 124 72.6
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 8.6e-47 191.0 124 74.2
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 1.1e-46 190.7 124 73.4
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 1.5e-46 190.3 124 75.0
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 1.5e-46 190.3 124 74.2
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 1.9e-46 189.9 124 72.6
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 2.5e-46 189.5 124 74.2
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 4.2e-46 188.7 124 71.8
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 5.5e-46 188.3 124 71.0
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 7.2e-46 188.0 124 75.0
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 1.2e-45 187.2 122 72.1
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 2.1e-45 186.4 124 71.0
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 2.1e-45 186.4 123 72.4
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 2.8e-45 186.0 124 70.2
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 2.8e-45 186.0 124 75.0
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 2.8e-45 186.0 124 73.4
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 4.7e-45 185.3 122 71.3
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 4.7e-45 185.3 122 71.3
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 4.7e-45 185.3 122 71.3
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 1.0e-44 184.1 124 71.0
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 1.0e-44 184.1 122 70.5
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 1.8e-44 183.3 122 71.3
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 1.8e-44 183.3 122 70.5
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 2.3e-44 183.0 124 72.6
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 2.3e-44 183.0 122 69.7
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 4.0e-44 182.2 122 69.7
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 4.0e-44 182.2 122 69.7
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 4.0e-44 182.2 124 71.8
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 4.0e-44 182.2 123 69.9
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 5.2e-44 181.8 122 69.7
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 5.2e-44 181.8 122 68.9
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 5.2e-44 181.8 122 68.9
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 6.8e-44 181.4 122 69.7
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 6.8e-44 181.4 124 67.7
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 8.9e-44 181.0 122 68.9
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 3.4e-43 179.1 122 68.9
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 5.7e-43 178.3 124 69.4
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 7.5e-43 177.9 124 70.2
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 9.8e-43 177.6 124 70.2
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 1.7e-42 176.8 124 71.0
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 2.2e-42 176.4 122 68.0
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 6.3e-42 174.9 118 72.9
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 2.4e-41 172.9 122 68.0
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 9.2e-41 171.0 109 72.5
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 4.5e-40 168.7 148 58.1
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.0e-39 167.5 140 60.7
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 6.6e-39 164.9 117 66.7
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 1.5e-38 163.7 106 73.6
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 2.5e-38 162.9 122 61.5
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 9.5e-38 161.0 124 59.7
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 4.7e-37 158.7 124 58.9
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 4.6e-32 142.1 97 73.2
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 3.1e-28 129.4 73 83.6
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 5.2e-28 128.6 88 72.7
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 9.8e-27 124.4 93 67.7
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 1.3e-26 124.0 106 61.3
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 2.4e-25 119.8 73 79.5
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 2.5e-22 109.8 73 72.6
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 7.5e-19 98.2 97 52.6
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 6.2e-13 78.6 63 58.7
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 3.1e-12 76.3 61 55.7
Lsat_1_v5_gn_1_104560 Lactuca sativa HOM05D001098 ORTHO05D003515 1.5e-11 73.9 46 71.7
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 1.5e-11 73.9 46 71.7
Lsat_1_v5_gn_9_124300 Lactuca sativa HOM05D001098 ORTHO05D003515 1.5e-11 73.9 46 71.7
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 2.0e-11 73.6 46 69.6
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 8.4e-10 68.2 140 32.1
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 1.9e-09 67.0 46 67.4
SEGI_00486 Sequoiadendron giganteum HOM05D001530 ORTHO05D384744 1.3e-07 60.8 52 65.4
CAN.G1327.6 Capsicum annuum HOM05D004269 ORTHO05D007861 4.3e-06 55.8 38 68.4


User provided reference genes

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