Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 0.0e+00 1198.3 622 100.0
SEGI_10027 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 1.1e-153 547.7 289 99.3
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 3.8e-93 346.7 416 46.4
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 7.1e-92 342.4 410 44.6
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 1.2e-91 341.7 408 46.1
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 3.5e-91 340.1 545 39.1
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 3.3e-89 333.6 396 47.0
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 1.3e-88 331.6 418 44.5
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 1.3e-88 331.6 464 43.1
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 1.6e-88 331.3 409 45.5
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 2.8e-88 330.5 510 40.2
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 6.9e-87 325.9 514 40.9
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 9.0e-87 325.5 402 45.5
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 9.0e-87 325.5 547 38.8
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 2.0e-86 324.3 458 41.9
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 3.4e-86 323.6 411 45.5
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 7.7e-86 322.4 410 42.9
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 7.7e-86 322.4 446 42.2
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 7.7e-86 322.4 446 42.2
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 5.0e-85 319.7 409 44.3
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 5.0e-85 319.7 413 44.1
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 6.5e-85 319.3 414 44.4
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 1.9e-84 317.8 409 43.5
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 7.2e-84 315.8 529 38.6
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 7.2e-84 315.8 531 39.0
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 1.2e-83 315.1 541 38.4
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 1.6e-83 314.7 409 43.3
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 3.6e-83 313.5 418 44.5
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 4.6e-83 313.2 409 42.5
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 2.3e-82 310.8 409 43.0
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 2.3e-82 310.8 552 37.7
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 2.3e-82 310.8 551 37.6
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.7e-82 309.3 551 37.4
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 4.3e-81 306.6 411 41.1
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 5.7e-81 306.2 415 43.6
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 4.8e-80 303.1 414 43.5
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.8e-79 301.2 415 42.2
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 4.1e-79 300.1 408 43.4
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 9.1e-79 298.9 463 39.5
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 4.5e-78 296.6 523 37.7
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 5.0e-77 293.1 418 41.9
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 6.5e-77 292.7 420 41.2
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 2.5e-76 290.8 497 38.6
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 7.2e-76 289.3 411 43.8
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 4.7e-75 286.6 409 40.8
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.6e-70 270.8 475 36.4
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 2.9e-69 267.3 471 35.9
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 3.2e-68 263.8 278 50.0
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 1.6e-67 261.5 279 50.2
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 6.1e-67 259.6 396 38.4
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 3.0e-66 257.3 503 34.0
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.0e-65 254.6 335 38.8
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 2.0e-65 254.6 397 39.8
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 1.7e-64 251.5 305 45.9
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 5.9e-62 243.0 555 30.8
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 7.7e-62 242.7 558 30.6
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 1.7e-61 241.5 266 48.5
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 1.2e-59 235.3 298 43.0
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 3.6e-59 233.8 270 47.4
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 2.2e-56 224.6 347 38.9
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 4.1e-55 220.3 202 53.0
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 6.5e-53 213.0 376 38.8
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 2.5e-52 211.1 395 36.2
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 3.3e-44 184.1 391 34.5
SEGI_26529 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 4.1e-39 167.2 84 100.0
Haze_05985 Corylus avellana HOM05D007837 ORTHO05D009965 3.1e-26 124.4 109 52.3
TPR.G1949 Trifolium pratense HOM05D007837 ORTHO05D009965 4.4e-25 120.6 185 40.5
TPR.G10794 Trifolium pratense HOM05D007837 ORTHO05D009965 1.7e-21 108.6 124 45.2
Hma1.2p1_0410F.1_g147010 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 1.1e-20 105.9 105 46.7
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.1e-19 101.7 121 43.0
Sabra11G0145700 Salix brachista HOM05D007837 ORTHO05D009965 8.1e-19 99.8 113 48.7
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.4e-15 88.2 218 32.6
Glyma.03G069100 Glycine max HOM05D007837 ORTHO05D009965 9.2e-15 86.3 168 34.5
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.6e-14 85.5 216 29.2
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.1e-14 85.1 248 27.8
TAR086G0001 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.7e-14 84.7 66 60.6
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 6.0e-14 83.6 214 30.8
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.7e-13 82.0 234 28.2
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.7e-13 82.0 234 28.2
TAR365G1222 Trochodendron aralioides HOM05D001154 ORTHO05D010892 6.6e-13 80.1 70 57.1
TAR626G1098 Trochodendron aralioides HOM05D001154 ORTHO05D010892 6.6e-13 80.1 70 57.1
GSVIVG01037970001 Vitis vinifera HOM05D007837 ORTHO05D009965 1.1e-12 79.3 104 34.6
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.3e-12 77.8 228 28.9
PRCOL_00005542 Prasinoderma coloniale HOM05D007837 ORTHO05D009965 4.3e-12 77.4 333 25.2
MCO10G143 Micromonas commoda HOM05D007837 ORTHO05D009965 7.3e-12 76.6 426 23.2
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 1.2e-11 75.9 180 31.1
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 3.6e-11 74.3 227 26.9
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 6.2e-11 73.6 218 28.0
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 8.1e-11 73.2 203 29.1
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 1.4e-10 72.4 205 29.8
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 1.8e-10 72.0 205 27.3
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 2.4e-10 71.6 263 26.6
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 2.4e-10 71.6 200 28.0
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 3.1e-10 71.2 203 28.6
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 3.1e-10 71.2 181 27.6
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 4.0e-10 70.9 200 28.5
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.0e-10 70.9 214 27.6
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 5.2e-10 70.5 248 27.0
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 6.8e-10 70.1 250 27.2
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 8.9e-10 69.7 180 28.9
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 1.5e-09 68.9 217 25.8
SMO263G0007 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.0e-09 68.6 194 24.2
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 4.4e-09 67.4 156 30.1
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 4.4e-09 67.4 184 27.7
Oeu008971.1 Olea europaea HOM05D007837 ORTHO05D009965 4.4e-09 67.4 100 34.0
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 5.8e-09 67.0 213 25.8
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 5.8e-09 67.0 238 26.5
Medtr4g035220 Medicago truncatula HOM05D007837 ORTHO05D009965 7.6e-09 66.6 113 38.1
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 9.9e-09 66.2 219 24.7
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 9.9e-09 66.2 252 26.2
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 1.3e-08 65.9 209 28.7
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 1.7e-08 65.5 242 26.9
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 2.2e-08 65.1 247 26.7
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 2.9e-08 64.7 214 27.1
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 2.9e-08 64.7 228 25.0
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.9e-08 64.7 246 28.0
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 2.9e-08 64.7 208 27.9
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 4.9e-08 63.9 187 26.2
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 8.4e-08 63.2 228 25.4
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 8.4e-08 63.2 158 27.8
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 8.4e-08 63.2 213 23.9
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 1.1e-07 62.8 246 27.6
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.1e-07 62.8 246 27.2
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.1e-07 62.8 246 27.6
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 1.4e-07 62.4 239 24.7
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 1.9e-07 62.0 221 27.1
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 1.9e-07 62.0 226 27.9
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 2.4e-07 61.6 207 25.6
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 3.2e-07 61.2 206 24.3
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 3.2e-07 61.2 198 24.7
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.2e-07 61.2 246 27.2
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 3.2e-07 61.2 219 25.1
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 4.2e-07 60.8 226 26.1
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 5.4e-07 60.5 215 26.5
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 7.1e-07 60.1 190 27.4
TAR371G0483 Trochodendron aralioides HOM05D001154 ORTHO05D010892 7.1e-07 60.1 46 58.7
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 1.6e-06 58.9 183 25.7
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 2.1e-06 58.5 187 25.1
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 2.1e-06 58.5 186 25.3
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.7e-06 58.2 207 25.1
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 3.5e-06 57.8 241 24.9
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 7.8e-06 56.6 184 25.5
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 7.8e-06 56.6 252 25.4


User provided reference genes

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