Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.3e-51 206.1 98 100.0
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.3e-51 206.1 98 100.0
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 7.0e-26 120.6 66 83.3
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 1.2e-25 119.8 65 84.6
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 1.2e-25 119.8 65 84.6
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 1.2e-25 119.8 66 81.8
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 2.0e-25 119.0 66 81.8
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 2.6e-25 118.6 66 80.3
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 2.6e-25 118.6 66 81.8
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 2.6e-25 118.6 66 80.3
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 3.5e-25 118.2 66 80.3
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 3.5e-25 118.2 66 80.3
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 4.5e-25 117.9 66 81.8
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 4.5e-25 117.9 66 81.8
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 5.9e-25 117.5 65 83.1
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 5.9e-25 117.5 65 83.1
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 7.7e-25 117.1 66 81.8
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 7.7e-25 117.1 66 80.3
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 1.3e-24 116.3 66 81.8
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 1.3e-24 116.3 66 78.8
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 1.3e-24 116.3 65 81.5
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 1.3e-24 116.3 65 81.5
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 1.3e-24 116.3 66 77.3
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 1.7e-24 115.9 66 81.8
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 1.7e-24 115.9 66 80.3
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 2.2e-24 115.5 66 78.8
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 2.2e-24 115.5 66 81.8
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 2.2e-24 115.5 66 78.8
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 2.2e-24 115.5 66 78.8
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 2.9e-24 115.2 65 81.5
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 2.9e-24 115.2 66 78.8
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 3.8e-24 114.8 66 78.8
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 3.8e-24 114.8 66 75.8
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 3.8e-24 114.8 66 80.3
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 3.8e-24 114.8 66 80.3
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 3.8e-24 114.8 66 77.3
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 3.8e-24 114.8 66 78.8
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 5.0e-24 114.4 66 80.3
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 5.0e-24 114.4 66 80.3
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 75.8
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 77.3
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 81.8
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 81.8
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 81.8
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 80.3
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 81.8
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 6.5e-24 114.0 66 78.8
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 8.5e-24 113.6 66 78.8
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 8.5e-24 113.6 66 78.8
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 8.5e-24 113.6 64 79.7
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 8.5e-24 113.6 66 77.3
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 8.5e-24 113.6 65 81.5
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 1.1e-23 113.2 66 80.3
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.1e-23 113.2 66 78.8
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 1.1e-23 113.2 66 80.3
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 1.1e-23 113.2 66 77.3
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.1e-23 113.2 66 78.8
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 1.1e-23 113.2 65 80.0
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.1e-23 113.2 65 78.5
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 75.8
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 1.5e-23 112.8 65 76.9
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 1.5e-23 112.8 65 80.0
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 80.3
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 80.3
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 80.3
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 80.3
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 80.3
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 80.3
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 1.5e-23 112.8 66 77.3
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 1.9e-23 112.5 65 80.0
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 2.5e-23 112.1 66 75.8
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 2.5e-23 112.1 65 80.0
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 2.5e-23 112.1 66 75.8
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 3.2e-23 111.7 65 76.9
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 3.2e-23 111.7 65 76.9
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 3.2e-23 111.7 66 74.2
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 3.2e-23 111.7 65 80.0
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 3.2e-23 111.7 65 76.9
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 3.2e-23 111.7 65 76.9
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 4.2e-23 111.3 66 78.8
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 4.2e-23 111.3 66 77.3
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 4.2e-23 111.3 66 74.2
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 5.5e-23 110.9 66 75.8
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 5.5e-23 110.9 66 77.3
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 5.5e-23 110.9 66 77.3
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 74.2
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 75.8
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 75.8
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 75.8
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 75.8
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 75.8
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 77.3
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 7.2e-23 110.5 65 78.5
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 78.8
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 77.3
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 7.2e-23 110.5 66 78.8
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 9.4e-23 110.2 64 79.7
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 9.4e-23 110.2 66 77.3
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 9.4e-23 110.2 66 77.3
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 9.4e-23 110.2 66 74.2
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 1.2e-22 109.8 66 77.3
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 1.2e-22 109.8 66 74.2
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 1.2e-22 109.8 65 76.9
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 1.6e-22 109.4 66 75.8
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 2.1e-22 109.0 66 71.2
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 2.7e-22 108.6 65 75.4
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 3.6e-22 108.2 66 75.8
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 3.6e-22 108.2 66 77.3
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 3.6e-22 108.2 65 75.4
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 6.1e-22 107.5 66 72.7
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 1.0e-21 106.7 65 76.9
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.8e-21 105.9 66 74.2
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 1.8e-21 105.9 65 69.2
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 2.3e-21 105.5 65 72.3
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 2.3e-21 105.5 66 72.7
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 3.0e-21 105.1 65 75.4
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 5.2e-21 104.4 66 72.7
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 1.1e-20 103.2 66 72.7
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 1.3e-19 99.8 65 69.2
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 1.3e-19 99.8 95 54.7
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.7e-19 99.4 66 71.2
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 1.1e-18 96.7 51 80.4
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.4e-18 96.3 50 82.0
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 5.3e-18 94.4 64 68.8
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 9.1e-18 93.6 51 78.4
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 4.5e-17 91.3 48 83.3
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 2.2e-16 89.0 60 70.0


User provided reference genes

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