Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15926 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 0.0e+00 1219.1 646 100.0
SEGI_18869 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-103 381.7 619 41.7
SEGI_19878 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.1e-98 363.6 633 41.5
SEGI_37325 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.2e-95 353.6 578 40.5
SEGI_04954 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.7e-93 345.9 541 41.8
SEGI_06325 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.0e-16 92.8 411 23.8
SEGI_18968 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.8e-13 82.0 257 25.3
SEGI_04007 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.0e-13 80.9 370 24.9
SEGI_22439 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.6e-12 78.2 272 28.3
SEGI_20532 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.6e-12 76.6 271 28.8
SEGI_24827 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.6e-12 76.6 271 28.8
SEGI_07675 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.3e-11 75.9 258 25.6
FAN10G3445 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-11 75.5 355 26.8
SEGI_25393 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.4e-11 73.2 327 25.7
SEGI_40660 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-10 72.8 335 24.5
SEGI_22567 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.4e-10 71.6 368 28.0
MD07G1243000 Malus domestica HOM05D000005 ORTHO05D000012 3.2e-10 71.2 163 33.1
QL09p004171 Quercus lobata HOM05D000005 ORTHO05D001748 3.2e-10 71.2 312 26.3
SEGI_01151 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.2e-10 71.2 196 27.0
SEGI_26361 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.2e-10 70.9 236 28.4
Gohir.D11G296916 Gossypium hirsutum HOM05D000005 ORTHO05D000012 9.3e-10 69.7 372 27.4
SEGI_33517 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.2e-09 69.3 288 26.7
MD07G1260700 Malus domestica HOM05D003506 ORTHO05D000012 1.6e-09 68.9 171 32.7
C09p64710 Brassica napus HOM05D000005 ORTHO05D028277 3.5e-09 67.8 399 24.1
SEGI_02649 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.0e-09 67.0 249 24.1
SEGI_18419 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.3e-08 65.9 274 27.0
SEGI_34051 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.8e-08 65.5 247 26.7
Eucgr.L01328 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.3e-08 65.1 397 23.7
SEGI_41602 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.3e-08 65.1 236 26.7
SEGI_27198 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.0e-08 64.7 272 26.1
SEGI_30703 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.0e-08 64.7 267 28.1
SEGI_34644 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.9e-08 64.3 286 23.8
Eucgr.C03469 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.7e-08 63.5 382 25.1
SEGI_11369 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.7e-08 63.5 101 28.7
AL8G11960 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 8.7e-08 63.2 269 27.5
SEGI_27639 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.7e-08 63.2 108 31.5
Carub.0008s0144 Capsella rubella HOM05D000005 ORTHO05D000449 1.1e-07 62.8 272 28.3
MD08G1230100 Malus domestica HOM05D003506 ORTHO05D000012 1.1e-07 62.8 184 31.5
SEGI_00432 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-07 62.8 201 34.3
Gorai.007G319000 Gossypium raimondii HOM05D000005 ORTHO05D000012 1.5e-07 62.4 377 22.5
MD17G1275900 Malus domestica HOM05D000005 ORTHO05D000012 1.9e-07 62.0 329 24.0
SEGI_32399 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.9e-07 62.0 408 22.3
Prupe.8G023200 Prunus persica HOM05D000005 ORTHO05D000012 2.5e-07 61.6 365 28.8
SEGI_28199 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.5e-07 61.6 237 26.6
QL07p043404 Quercus lobata HOM05D000005 ORTHO05D000012 3.3e-07 61.2 375 23.5
QL07p044493 Quercus lobata HOM05D000005 ORTHO05D000012 3.3e-07 61.2 375 23.5
MD01G1189200 Malus domestica HOM05D000005 ORTHO05D000012 4.3e-07 60.8 199 28.6
Potri.003G101000 Populus trichocarpa HOM05D003506 ORTHO05D004063 4.3e-07 60.8 317 26.2
Sed0002839 Sechium edule HOM05D000005 ORTHO05D000012 4.3e-07 60.8 355 22.3
Eucgr.C03467 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.6e-07 60.5 296 25.0
Gohir.D11G295500 Gossypium hirsutum HOM05D000005 ORTHO05D000012 5.6e-07 60.5 334 26.0
SEGI_01862 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.6e-07 60.5 266 24.1
SEGI_02767 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.6e-07 60.5 234 26.1
SEGI_04356 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.6e-07 60.5 234 26.1
SEGI_27744 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.6e-07 60.5 234 26.1
C07p28220 Brassica napus HOM05D000005 ORTHO05D012152 7.4e-07 60.1 160 28.8
BolC7t43365H Brassica oleracea HOM05D000005 ORTHO05D012152 7.4e-07 60.1 160 28.8
SEGI_27250 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.4e-07 60.1 89 41.6
SEGI_32959 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.4e-07 60.1 102 33.3
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 9.6e-07 59.7 333 25.5
Potri.019G002500 Populus trichocarpa HOM05D000005 ORTHO05D000012 9.6e-07 59.7 335 22.7
SEGI_02675 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.3e-06 59.3 137 27.7
SEGI_13920 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.3e-06 59.3 288 25.3
Gohir.A11G283852 Gossypium hirsutum HOM05D000005 ORTHO05D000012 1.6e-06 58.9 366 24.0
SEGI_07002 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.6e-06 58.9 322 24.8
BcaC03g16731 Brassica carinata HOM05D000005 ORTHO05D021175 2.1e-06 58.5 101 35.6
Gohir.A11G282513 Gossypium hirsutum HOM05D000005 ORTHO05D000012 2.1e-06 58.5 348 26.4
MD05G1019700 Malus domestica HOM05D000005 ORTHO05D000012 2.1e-06 58.5 309 24.9
QL03p063843 Quercus lobata HOM05D000005 ORTHO05D000012 2.1e-06 58.5 289 25.3
SEGI_27463 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.1e-06 58.5 259 23.6
VMungo0464G1714 Vigna mungo HOM05D000005 ORTHO05D000012 2.1e-06 58.5 173 26.6
CARHR176790 Cardamine hirsuta HOM05D000005 ORTHO05D012152 2.8e-06 58.2 182 26.9
Prupe.2G057100 Prunus persica HOM05D000005 ORTHO05D020377 2.8e-06 58.2 396 25.5
QL04p075253 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-06 58.2 220 27.7
Nitab4.5_0002587g0050 Nicotiana tabacum HOM05D000005 ORTHO05D000012 3.7e-06 57.8 225 26.7
Nitab4.5_0013055g0010 Nicotiana tabacum HOM05D000005 ORTHO05D000012 3.7e-06 57.8 303 26.4
QL04p075308 Quercus lobata HOM05D006076 ORTHO05D007506 3.7e-06 57.8 198 27.8
SEGI_25714 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.7e-06 57.8 149 31.5
CARHR175090 Cardamine hirsuta HOM05D000005 ORTHO05D000449 4.8e-06 57.4 210 29.5
CARHR176940 Cardamine hirsuta HOM05D000005 ORTHO05D012152 4.8e-06 57.4 173 26.6
Cc00_g19750 Coffea canephora HOM05D000009 ORTHO05D000008 4.8e-06 57.4 194 27.8
MD08G1229600 Malus domestica HOM05D003506 ORTHO05D004063 4.8e-06 57.4 246 27.6
CARHR254250 Cardamine hirsuta HOM05D000005 ORTHO05D000012 6.2e-06 57.0 295 24.1
CsaV3_5G039760 Cucumis sativus L. HOM05D000005 ORTHO05D000012 6.2e-06 57.0 433 23.8
MD10G1137400 Malus domestica HOM05D000005 ORTHO05D000012 6.2e-06 57.0 217 25.3
SEGI_13607 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.2e-06 57.0 125 27.2
SEGI_22680 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.2e-06 57.0 133 23.3
SEGI_29267 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.2e-06 57.0 109 30.3
SEGI_32238 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.2e-06 57.0 126 25.4
Actinidia05169 Actinidia chinensis HOM05D000101 ORTHO05D000089 8.1e-06 56.6 163 31.3
C06p34590 Brassica napus HOM05D000005 ORTHO05D010246 8.1e-06 56.6 237 25.7
MD10G1136400 Malus domestica HOM05D000005 ORTHO05D000012 8.1e-06 56.6 217 25.8
Prupe.1G160500 Prunus persica HOM05D000005 ORTHO05D000012 8.1e-06 56.6 335 25.1
TPR.G36032 Trifolium pratense HOM05D000009 ORTHO05D000008 8.1e-06 56.6 254 23.6


User provided reference genes

Program Settings