Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 2.5e-248 861.7 448 100.0
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 2.3e-100 370.2 376 55.6
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 5.5e-94 349.0 372 52.7
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.1e-93 347.1 371 55.0
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 3.3e-91 339.7 360 52.8
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 3.3e-91 339.7 394 51.0
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 4.4e-91 339.3 365 52.3
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 4.4e-91 339.3 352 53.7
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 1.3e-90 337.8 370 53.0
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 8.2e-90 335.1 365 52.1
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 1.1e-89 334.7 374 52.1
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.1e-89 334.7 394 50.8
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.4e-89 334.3 380 52.1
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 1.8e-89 334.0 382 52.9
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 2.4e-89 333.6 371 53.1
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 7.0e-89 332.0 396 50.8
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 9.1e-89 331.6 389 50.9
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.2e-88 331.3 379 51.7
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.2e-88 331.3 375 51.5
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 1.5e-88 330.9 366 54.1
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.0e-88 330.5 366 53.8
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.6e-88 330.1 366 53.8
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 4.5e-88 329.3 349 54.2
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 7.7e-88 328.6 364 53.0
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 7.7e-88 328.6 387 50.9
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 1.0e-87 328.2 369 52.0
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 2.2e-87 327.0 371 53.6
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 1.1e-86 324.7 389 49.6
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.5e-86 324.3 411 48.7
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 1.5e-86 324.3 369 52.0
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 4.2e-86 322.8 381 50.7
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 4.2e-86 322.8 411 48.7
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 9.4e-86 321.6 380 48.9
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 1.2e-85 321.2 373 50.4
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 6.1e-85 318.9 385 50.4
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 6.1e-85 318.9 356 52.5
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 3.9e-84 316.2 379 48.8
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.1e-83 314.7 372 50.0
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 3.3e-83 313.2 367 49.9
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 4.4e-83 312.8 374 48.4
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.3e-82 311.2 382 49.5
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.7e-82 310.8 380 47.1
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 3.7e-82 309.7 377 49.3
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 6.3e-82 308.9 381 48.8
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 8.2e-82 308.5 437 47.1
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.1e-81 308.1 377 48.5
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.8e-81 307.4 366 51.6
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.8e-81 307.4 384 48.4
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 2.4e-81 307.0 362 49.4
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 2.4e-81 307.0 360 50.3
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 2.4e-81 307.0 377 49.1
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 9.1e-81 305.1 376 47.3
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 9.1e-81 305.1 377 49.1
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 1.2e-80 304.7 393 46.1
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 2.0e-80 303.9 390 47.9
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 7.7e-80 302.0 379 48.5
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.1e-78 298.1 364 48.1
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 1.9e-78 297.4 363 50.7
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 1.9e-78 297.4 390 45.9
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 3.2e-78 296.6 364 48.6
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 5.5e-78 295.8 374 46.8
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 5.5e-78 295.8 354 48.3
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 7.2e-78 295.4 350 49.1
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.2e-77 294.7 374 47.6
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 2.7e-77 293.5 359 47.6
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 3.6e-77 293.1 419 44.4
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.4e-76 291.2 386 47.4
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 1.8e-76 290.8 408 44.4
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.0e-76 290.0 392 46.9
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 4.0e-76 289.7 358 47.2
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 4.0e-76 289.7 392 46.4
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 6.8e-76 288.9 360 46.7
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 6.8e-76 288.9 360 46.7
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 1.5e-75 287.7 277 57.4
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 1.7e-74 284.3 431 42.9
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.2e-74 283.9 386 46.4
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 2.2e-74 283.9 356 47.8
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 3.7e-74 283.1 388 44.8
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 1.4e-73 281.2 362 45.6
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.4e-73 281.2 362 45.6
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 2.4e-73 280.4 365 46.0
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 7.0e-73 278.9 367 47.1
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 9.1e-73 278.5 375 45.6
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 1.6e-69 267.7 384 44.8
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 3.4e-67 260.0 366 47.5
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 7.2e-62 242.3 247 57.5
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 3.0e-60 236.9 375 42.4
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 1.5e-59 234.6 349 41.8
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 4.6e-48 196.4 296 42.6
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 1.9e-46 191.0 351 38.5
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 2.8e-37 160.6 291 33.7
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.5e-32 143.7 300 38.3
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 7.3e-30 136.0 152 52.6
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 1.1e-28 132.1 154 47.4
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 8.4e-26 122.5 143 49.7
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 2.8e-21 107.5 111 55.0
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 3.4e-19 100.5 421 24.0
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 5.8e-19 99.8 231 35.5
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-18 98.2 241 34.9
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.2e-16 92.0 56 75.0
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 3.5e-16 90.5 139 41.0
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.3e-13 82.0 59 66.1
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 4.9e-10 70.1 139 40.3
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 9.6e-06 55.8 36 72.2


User provided reference genes

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