Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15801 Sequoiadendron giganteum HOM05D003067 ORTHO05D007251 2.3e-69 265.4 131 100.0
PSO384G1039 Papaver somniferum HOM05D003067 ORTHO05D007251 2.6e-44 182.2 130 64.6
Aqoxy5G03664 Aquilegia oxysepala HOM05D003067 ORTHO05D007251 3.4e-44 181.8 130 64.6
Manes.14G111800 Manihot esculenta HOM05D003067 ORTHO05D007251 4.4e-44 181.4 130 65.4
PGSC0003DMG400007895 Solanum tuberosum HOM05D003067 ORTHO05D007251 5.8e-44 181.0 130 66.2
Hma1.2p1_0222F.1_g093300 Hydrangea macrophylla HOM05D003067 ORTHO05D007251 7.6e-44 180.6 130 66.2
Os04g0627200 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D007251 7.6e-44 180.6 130 65.4
CSS0017292 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D007251 1.3e-43 179.9 130 65.4
CSS0043589 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D007251 1.3e-43 179.9 130 65.4
Solyc12g010220.3 Solanum lycopersicum HOM05D003067 ORTHO05D007251 1.7e-43 179.5 130 65.4
Sopen12g005110 Solanum pennellii HOM05D003067 ORTHO05D007251 1.7e-43 179.5 130 65.4
MBI02_g23956_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D007251 2.2e-43 179.1 130 64.6
PSO339G4470 Papaver somniferum HOM05D003067 ORTHO05D007251 2.2e-43 179.1 130 63.8
Hund26544 Selenicereus undatus HOM05D003067 ORTHO05D007251 2.2e-43 179.1 130 63.8
Aqoxy2G01213 Aquilegia oxysepala HOM05D003067 ORTHO05D007251 2.9e-43 178.7 130 63.1
Peaxi162Scf00108g00073 Petunia axillaris HOM05D003067 ORTHO05D007251 2.9e-43 178.7 130 65.4
Dinv42885 Davidia involucrata HOM05D003067 ORTHO05D007251 3.8e-43 178.3 130 65.4
Dinv43215 Davidia involucrata HOM05D003067 ORTHO05D007251 3.8e-43 178.3 130 65.4
QL02p092650 Quercus lobata HOM05D003067 ORTHO05D007251 3.8e-43 178.3 130 64.6
AUR62035264 Chenopodium quinoa HOM05D003067 ORTHO05D007251 4.9e-43 177.9 130 63.1
TWI34G0114 Tripterygium wilfordii HOM05D003067 ORTHO05D007251 4.9e-43 177.9 130 63.8
Nn4g26426 Nelumbo nucifera HOM05D003067 ORTHO05D007251 6.4e-43 177.6 129 65.9
PSO063G5563 Papaver somniferum HOM05D003067 ORTHO05D007251 6.4e-43 177.6 130 63.8
TAR383G0409 Trochodendron aralioides HOM05D003067 ORTHO05D007251 6.4e-43 177.6 130 64.6
CAN.G551.29 Capsicum annuum HOM05D003067 ORTHO05D007251 8.4e-43 177.2 130 63.8
Cc06_g15250 Coffea canephora HOM05D003067 ORTHO05D007251 8.4e-43 177.2 130 65.4
Nitab4.5_0001478g0100 Nicotiana tabacum HOM05D003067 ORTHO05D007251 8.4e-43 177.2 130 63.8
Nitab4.5_0002315g0050 Nicotiana tabacum HOM05D003067 ORTHO05D007251 8.4e-43 177.2 130 63.8
Pp3c16_5430 Physcomitrium patens HOM05D003067 ORTHO05D007251 8.4e-43 177.2 120 70.0
Potri.018G110200 Populus trichocarpa HOM05D003067 ORTHO05D007251 1.1e-42 176.8 130 63.8
Sabra18G0093200 Salix brachista HOM05D003067 ORTHO05D007251 1.1e-42 176.8 130 63.8
MSTRG.11189 Avicennia marina HOM05D003067 ORTHO05D007251 1.4e-42 176.4 130 64.6
CDE04G0735 Ceratophyllum demersum HOM05D003067 ORTHO05D007251 1.4e-42 176.4 126 67.5
PSO063G0174 Papaver somniferum HOM05D003067 ORTHO05D007251 1.4e-42 176.4 130 63.1
Rhsim01G0045000 Rhododendron simsii HOM05D003067 ORTHO05D007251 1.4e-42 176.4 130 64.6
RhsimUnG0172000 Rhododendron simsii HOM05D003067 ORTHO05D007251 1.4e-42 176.4 130 64.6
Ciclev10009382m.g Citrus clementina HOM05D003067 ORTHO05D007251 1.9e-42 176.0 130 63.8
Gohir.D10G035400 Gossypium hirsutum HOM05D003067 ORTHO05D007251 2.4e-42 175.6 130 63.1
Gorai.011G037200 Gossypium raimondii HOM05D003067 ORTHO05D007251 2.4e-42 175.6 130 63.1
Thecc.09G033800 Theobroma cacao HOM05D003067 ORTHO05D007251 3.2e-42 175.3 130 63.8
Atru.chr7.135 Acer truncatum HOM05D003067 ORTHO05D007251 4.2e-42 174.9 130 63.1
EL10Ac9g22772 Beta vulgaris HOM05D003067 ORTHO05D007251 4.2e-42 174.9 130 63.1
THA.LOC104822364 Tarenaya hassleriana HOM05D003067 ORTHO05D007251 4.2e-42 174.9 130 62.3
EL10Ac3g05662 Beta vulgaris HOM05D003067 ORTHO05D007251 5.4e-42 174.5 130 63.1
ClCG10G005110 Citrullus lanatus HOM05D003067 ORTHO05D007251 5.4e-42 174.5 130 63.8
Cpa.g.sc46.128 Carica papaya HOM05D003067 ORTHO05D007251 7.1e-42 174.1 130 61.5
COL.COLO4_18775 Corchorus olitorius HOM05D003067 ORTHO05D007251 7.1e-42 174.1 130 63.1
Gohir.D06G096900 Gossypium hirsutum HOM05D003067 ORTHO05D007251 7.1e-42 174.1 130 63.1
PGR142G0687 Punica granatum HOM05D003067 ORTHO05D007251 7.1e-42 174.1 130 63.8
Actinidia04284 Actinidia chinensis HOM05D003067 ORTHO05D007251 9.3e-42 173.7 130 63.1
ATR0680G235 Amborella trichopoda HOM05D003067 ORTHO05D007251 9.3e-42 173.7 130 62.3
Haze_19236 Corylus avellana HOM05D003067 ORTHO05D007251 9.3e-42 173.7 130 61.5
CsaV3_3G004790 Cucumis sativus L. HOM05D003067 ORTHO05D007251 9.3e-42 173.7 130 63.8
Gohir.A10G034666 Gossypium hirsutum HOM05D003067 ORTHO05D007251 1.2e-41 173.3 130 61.5
CiPaw.15G174100 Carya illinoinensis HOM05D003067 ORTHO05D007251 1.6e-41 172.9 130 62.3
Gorai.010G111900 Gossypium raimondii HOM05D003067 ORTHO05D007251 1.6e-41 172.9 130 62.3
Dinv41399 Davidia involucrata HOM05D003067 ORTHO05D007251 2.1e-41 172.6 130 63.1
Eucgr.C00365 Eucalyptus grandis HOM05D003067 ORTHO05D007251 2.1e-41 172.6 130 63.1
Lj7P455T22 Lonicera japonica HOM05D003067 ORTHO05D007251 2.1e-41 172.6 130 62.3
Zm00001eb431360 Zea mays HOM05D003067 ORTHO05D007251 2.1e-41 172.6 131 62.6
MELO3C014177.2 Cucumis melo HOM05D003067 ORTHO05D007251 2.7e-41 172.2 130 63.1
Migut.C01262 Erythranthe guttata HOM05D003067 ORTHO05D007251 2.7e-41 172.2 130 62.3
Peaxi162Scf00177g00916 Petunia axillaris HOM05D003067 ORTHO05D007251 2.7e-41 172.2 135 62.2
Prupe.7G259900 Prunus persica HOM05D003067 ORTHO05D007251 4.6e-41 171.4 130 61.5
AL2G12000 Arabidopsis lyrata HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 61.5
BcaC04g22483 Brassica carinata HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 60.8
C09p18790 Brassica napus HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 60.8
BolC9t54781H Brassica oleracea HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 60.8
FvH4_1g01200 Fragaria vesca HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 62.3
FAN23G0234 Fragaria x ananassa HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 62.3
FAN28G1587 Fragaria x ananassa HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 62.3
RcHm_v2.0_Chr2g0086001 Rosa chinensis HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 62.3
Sp2g01250 Schrenkiella parvula HOM05D003067 ORTHO05D007251 6.0e-41 171.0 130 61.5
Aa31LG2G710 Aethionema arabicum HOM05D000318 ORTHO05D007251 7.8e-41 170.6 130 60.8
Duzib187G1913 Durio zibethinus HOM05D003067 ORTHO05D007251 7.8e-41 170.6 130 63.1
unitig_32.g11754 Utricularia gibba HOM05D003067 ORTHO05D007251 7.8e-41 170.6 130 61.5
AT1G63270 Arabidopsis thaliana HOM05D003067 ORTHO05D007251 1.0e-40 170.2 130 61.5
Carub.0002s0155 Capsella rubella HOM05D003067 ORTHO05D007251 1.0e-40 170.2 130 61.5
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.0e-40 170.2 127 62.2
FAN19G2760 Fragaria x ananassa HOM05D003067 ORTHO05D007251 1.0e-40 170.2 130 62.3
Sed0009590 Sechium edule HOM05D003067 ORTHO05D007251 1.0e-40 170.2 130 63.1
Oeu021254.1 Olea europaea HOM05D003067 ORTHO05D007251 1.3e-40 169.9 130 61.5
AL2G11880 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.7e-40 169.5 130 60.8
AL2G11970 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.7e-40 169.5 130 60.8
Thhalv10023673m.g Eutrema salsugineum HOM05D003067 ORTHO05D007251 1.7e-40 169.5 130 60.8
MD02G1010200 Malus domestica HOM05D003067 ORTHO05D007251 1.7e-40 169.5 130 60.8
HPP92_015883 Vanilla planifolia HOM05D003067 ORTHO05D007251 1.7e-40 169.5 131 62.6
BcaB07g31398 Brassica carinata HOM05D003067 ORTHO05D007251 2.3e-40 169.1 130 60.0
DCAR_014818 Daucus carota HOM05D003067 ORTHO05D007251 3.0e-40 168.7 130 58.5
A09p15540 Brassica napus HOM05D003067 ORTHO05D007251 3.9e-40 168.3 130 59.2
BraA09t37194Z Brassica rapa HOM05D003067 ORTHO05D007251 3.9e-40 168.3 130 59.2
Glyma.13G154800 Glycine max HOM05D003067 ORTHO05D007251 3.9e-40 168.3 130 60.8
CARHR048140 Cardamine hirsuta HOM05D003067 ORTHO05D007251 5.1e-40 167.9 130 60.8
Lj4g0016734 Lotus japonicus HOM05D003067 ORTHO05D007251 5.1e-40 167.9 130 61.5
TPR.G39220 Trifolium pratense HOM05D003067 ORTHO05D007251 6.6e-40 167.5 130 60.0
SGA_v2.0_scaffold223G42827 Striga asiatica HOM05D003067 ORTHO05D007251 1.1e-39 166.8 126 61.9
Sc18g0006940 Simmondsia chinensis HOM05D003067 ORTHO05D007251 1.9e-39 166.0 131 61.1
Ca_21111_v3 Cicer arietinum L. HOM05D003067 ORTHO05D007251 5.6e-39 164.5 130 58.5
FvH4_1g01210 Fragaria vesca HOM05D003067 ORTHO05D007251 9.6e-39 163.7 130 59.2
Lalb_Chr19g0125941 Lupinus albus HOM05D003067 ORTHO05D007251 2.1e-38 162.5 130 59.2
ECA234G4787 Erigeron canadensis HOM05D003067 ORTHO05D007251 3.6e-38 161.8 130 58.5
HanXRQChr10g0314651 Helianthus annuus HOM05D003067 ORTHO05D007251 8.1e-38 160.6 130 57.7
Psat4g008800 Pisum sativum HOM05D003067 ORTHO05D007251 8.1e-38 160.6 129 58.1
Zm00001eb069730 Zea mays HOM05D003067 ORTHO05D007251 1.1e-37 160.2 132 59.1
Zm00001eb069940 Zea mays HOM05D003067 ORTHO05D007251 1.1e-37 160.2 132 59.1
Oeu043498.1 Olea europaea HOM05D003067 ORTHO05D007251 1.8e-37 159.5 130 59.2
Phvul.003G157800 Phaseolus vulgaris HOM05D003067 ORTHO05D007251 1.8e-37 159.5 130 56.9
SHI31898 Sapria himalayana HOM05D003067 ORTHO05D007251 1.8e-37 159.5 130 56.2
VMungo1215G2568 Vigna mungo HOM05D003067 ORTHO05D007251 1.8e-37 159.5 130 57.7
Zm00001eb069870 Zea mays HOM05D003067 ORTHO05D007251 1.8e-37 159.5 132 59.1
Medtr4g131330 Medicago truncatula HOM05D003067 ORTHO05D007251 3.1e-37 158.7 128 59.4
GSVIVG01033294001 Vitis vinifera HOM05D003067 ORTHO05D007251 4.0e-37 158.3 130 58.5
Zm00001eb069890 Zea mays HOM05D003067 ORTHO05D007251 4.0e-37 158.3 132 59.8
Mapoly0096s0064 Marchantia polymorpha HOM05D003067 ORTHO05D007251 7.6e-36 154.1 123 57.7
MBI02_g23954_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D007251 6.4e-35 151.0 130 57.7
BolC1t03287H Brassica oleracea HOM05D003067 ORTHO05D007251 1.4e-34 149.8 130 55.4
MD15G1155200 Malus domestica HOM05D003067 ORTHO05D007251 4.2e-34 148.3 130 54.6
CBR_g47104 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-30 136.3 128 50.8
Zm00001eb069810 Zea mays HOM05D003067 ORTHO05D007251 4.5e-28 128.3 99 62.6
MD00G1161600 Malus domestica HOM05D003067 ORTHO05D007251 1.1e-26 123.6 94 61.7
Actinidia38340 Actinidia chinensis HOM05D003779 ORTHO05D007251 2.7e-25 119.0 98 61.2
Nitab4.5_0007909g0030 Nicotiana tabacum HOM05D003067 ORTHO05D007251 1.3e-24 116.7 75 72.0
arahy.Tifrunner.gnm1.ann1.X1G7ME Arachis hypogaea HOM05D003067 ORTHO05D007251 1.1e-21 107.1 77 63.6
Nitab4.5_0001812g0050 Nicotiana tabacum HOM05D003067 ORTHO05D007251 1.8e-16 89.7 130 41.5
Lj3g0009875 Lotus japonicus HOM05D003067 ORTHO05D007251 3.2e-10 68.9 56 60.7
Peaxi162Scf00108g00811 Petunia axillaris HOM05D003067 ORTHO05D007251 6.1e-09 64.7 51 62.7
MSTRG.22834 Avicennia marina HOM05D000068 ORTHO05D007185 6.7e-08 61.2 104 38.5
Actinidia02558 Actinidia chinensis HOM05D000068 ORTHO05D007185 1.5e-07 60.1 104 33.7
Actinidia18270 Actinidia chinensis HOM05D000068 ORTHO05D007185 2.5e-07 59.3 104 33.7
CSS0013512 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D007185 4.3e-07 58.5 105 37.1
CSS0049357 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D007185 4.3e-07 58.5 104 34.6
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.7e-07 58.2 104 35.6
HanXRQChr05g0157521 Helianthus annuus HOM05D000068 ORTHO05D007185 5.7e-07 58.2 100 35.0
FvH4_4g06671 Fragaria vesca HOM05D000068 ORTHO05D007185 7.4e-07 57.8 104 35.6
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.4e-07 57.8 104 35.6
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.4e-07 57.8 104 35.6
RcHm_v2.0_Chr4g0398581 Rosa chinensis HOM05D000068 ORTHO05D007185 9.7e-07 57.4 104 34.6
Dinv41209 Davidia involucrata HOM05D000068 ORTHO05D007185 1.3e-06 57.0 104 36.5
CSS0044182 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D007185 1.6e-06 56.6 104 32.7
MCO09G445 Micromonas commoda HOM05D000681 ORTHO05D034395 1.6e-06 56.6 90 38.9
Ciclev10009186m.g Citrus clementina HOM05D000068 ORTHO05D007185 2.8e-06 55.8 104 31.7
DCAR_021383 Daucus carota HOM05D000068 ORTHO05D007185 2.8e-06 55.8 104 34.6
Dinv21442 Davidia involucrata HOM05D000068 ORTHO05D007185 3.7e-06 55.5 104 32.7
Lsat_1_v5_gn_6_103140 Lactuca sativa HOM05D000068 ORTHO05D007185 3.7e-06 55.5 100 35.0
GSVIVG01029255001 Vitis vinifera HOM05D000068 ORTHO05D007185 3.7e-06 55.5 104 33.7
MSTRG.9387 Avicennia marina HOM05D000068 ORTHO05D007185 4.8e-06 55.1 104 33.7
CiPaw.16G102700 Carya illinoinensis HOM05D000068 ORTHO05D007185 4.8e-06 55.1 104 31.7
Lsat_1_v5_gn_5_9120 Lactuca sativa HOM05D000068 ORTHO05D007185 4.8e-06 55.1 104 36.5
Hund07508 Selenicereus undatus HOM05D000068 ORTHO05D007185 4.8e-06 55.1 97 34.0
Solyc03g117810.4 Solanum lycopersicum HOM05D000068 ORTHO05D007185 4.8e-06 55.1 104 33.7
Sopen03g036720 Solanum pennellii HOM05D000068 ORTHO05D007185 4.8e-06 55.1 104 33.7
PGSC0003DMG400014219 Solanum tuberosum HOM05D000068 ORTHO05D007185 4.8e-06 55.1 104 33.7
unitig_61.g26280 Utricularia gibba HOM05D000068 ORTHO05D007185 6.3e-06 54.7 97 34.0
Sc03g0010300 Simmondsia chinensis HOM05D000068 ORTHO05D007185 8.2e-06 54.3 97 33.0


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