Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15788 Sequoiadendron giganteum HOM05D001623 ORTHO05D001473 5.0e-76 287.7 149 100.0
SEGI_22646 Sequoiadendron giganteum HOM05D001623 ORTHO05D001473 2.5e-19 99.4 86 66.3
SEGI_39204 Sequoiadendron giganteum HOM05D001623 ORTHO05D001473 2.5e-19 99.4 86 66.3
EL10Ac6g15087 Beta vulgaris HOM05D001623 ORTHO05D001473 2.1e-10 69.7 99 41.4
Zm00001eb194190 Zea mays HOM05D001623 ORTHO05D001473 1.7e-07 60.1 84 42.9
PSO063G5929 Papaver somniferum HOM05D001623 ORTHO05D001473 2.2e-07 59.7 50 56.0
Peaxi162Scf00478g00048 Petunia axillaris HOM05D001623 ORTHO05D001473 2.9e-07 59.3 53 54.7
Sopen04g024830 Solanum pennellii HOM05D001623 ORTHO05D001473 2.9e-07 59.3 54 55.6
PGSC0003DMG400020622 Solanum tuberosum HOM05D001623 ORTHO05D001473 2.9e-07 59.3 54 55.6
Gohir.A11G200200 Gossypium hirsutum HOM05D001623 ORTHO05D001473 4.9e-07 58.5 109 35.8
PSO782G2592 Papaver somniferum HOM05D001623 ORTHO05D001473 8.4e-07 57.8 50 52.0
CAN.G813.11 Capsicum annuum HOM05D001623 ORTHO05D001473 1.1e-06 57.4 53 50.9
CAN.G337.131 Capsicum annuum HOM05D001623 ORTHO05D001473 1.4e-06 57.0 53 52.8
Psat5g089440 Pisum sativum HOM05D001623 ORTHO05D001473 1.9e-06 56.6 44 61.4
PSO781G0095 Papaver somniferum HOM05D001623 ORTHO05D001473 2.4e-06 56.2 42 64.3
unitig_0.g1886 Utricularia gibba HOM05D001623 ORTHO05D001473 2.4e-06 56.2 54 51.9
Manes.06G132900 Manihot esculenta HOM05D001623 ORTHO05D001473 3.2e-06 55.8 53 50.9
HPP92_004294 Vanilla planifolia HOM05D001623 ORTHO05D001473 3.2e-06 55.8 50 46.0
HPP92_004296 Vanilla planifolia HOM05D001623 ORTHO05D001473 3.2e-06 55.8 50 46.0
CARHR113320 Cardamine hirsuta HOM05D001623 ORTHO05D001473 4.2e-06 55.5 53 52.8
Nn5g29077 Nelumbo nucifera HOM05D001623 ORTHO05D001473 4.2e-06 55.5 52 59.6
Nitab4.5_0012757g0010 Nicotiana tabacum HOM05D001623 ORTHO05D001473 4.2e-06 55.5 42 61.9
Sc16g0005570 Simmondsia chinensis HOM05D001623 ORTHO05D001473 4.2e-06 55.5 52 50.0
TAR636G2485 Trochodendron aralioides HOM05D001623 ORTHO05D001473 4.2e-06 55.5 46 54.3
CSS0028578 Camellia sinensis var. sinensis HOM05D001623 ORTHO05D001473 5.5e-06 55.1 78 44.9
Os02g0753300 Oryza sativa ssp. japonica HOM05D001623 ORTHO05D001473 5.5e-06 55.1 89 38.2
Sopen03g026560 Solanum pennellii HOM05D001623 ORTHO05D001473 5.5e-06 55.1 53 52.8
Sopen03g026660 Solanum pennellii HOM05D001623 ORTHO05D001473 5.5e-06 55.1 53 52.8
PGSC0003DMG400013983 Solanum tuberosum HOM05D001623 ORTHO05D001473 5.5e-06 55.1 44 56.8
Cpa.g.sc1516.1 Carica papaya HOM05D001623 ORTHO05D001473 7.1e-06 54.7 48 50.0
CDE09G0066 Ceratophyllum demersum HOM05D001623 ORTHO05D001473 7.1e-06 54.7 42 59.5
CDE11G0762 Ceratophyllum demersum HOM05D001623 ORTHO05D001473 7.1e-06 54.7 42 59.5
Nitab4.5_0006836g0010 Nicotiana tabacum HOM05D001623 ORTHO05D001473 7.1e-06 54.7 55 49.1
SalBow3G3252 Salvia bowleyana HOM05D001623 ORTHO05D001473 7.1e-06 54.7 42 64.3
Solyc03g096460.4 Solanum lycopersicum HOM05D001623 ORTHO05D001473 7.1e-06 54.7 54 50.0
Aqoxy2G00315 Aquilegia oxysepala HOM05D001623 ORTHO05D001473 9.3e-06 54.3 55 49.1
ECA246G4551 Erigeron canadensis HOM05D001623 ORTHO05D001473 9.3e-06 54.3 52 50.0
Migut.H02368 Erythranthe guttata HOM05D001623 ORTHO05D001473 9.3e-06 54.3 42 61.9
Lsat_1_v5_gn_5_44120 Lactuca sativa HOM05D001623 ORTHO05D001473 9.3e-06 54.3 51 51.0


User provided reference genes

Program Settings