Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 8.4e-147 523.9 303 100.0
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 5.6e-42 175.6 127 63.8
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 8.1e-41 171.8 82 100.0
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 5.8e-39 165.6 122 62.3
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 5.8e-39 165.6 122 62.3
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 7.6e-39 165.2 122 61.5
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 7.6e-39 165.2 123 61.0
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 2.9e-38 163.3 122 59.0
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.4e-38 162.2 122 60.7
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.4e-37 161.0 127 60.6
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.4e-37 161.0 121 58.7
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 1.4e-37 161.0 122 60.7
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 3.2e-37 159.8 137 55.5
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 5.5e-37 159.1 130 60.0
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 7.1e-37 158.7 127 61.4
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 7.1e-37 158.7 122 58.2
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 7.1e-37 158.7 121 59.5
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 9.3e-37 158.3 121 58.7
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 1.2e-36 157.9 140 54.3
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 1.2e-36 157.9 128 57.8
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.6e-36 157.5 127 53.5
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.6e-36 157.5 122 57.4
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.6e-36 157.5 137 53.3
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 2.1e-36 157.1 122 59.0
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 2.1e-36 157.1 120 57.5
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.7e-36 156.8 128 57.0
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.7e-36 156.8 123 57.7
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.7e-36 156.8 128 56.2
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.7e-36 156.8 128 56.2
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.7e-36 156.8 121 58.7
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 3.5e-36 156.4 123 56.9
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 3.5e-36 156.4 134 56.0
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 3.5e-36 156.4 128 57.0
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 4.6e-36 156.0 122 56.6
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 4.6e-36 156.0 122 56.6
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 6.0e-36 155.6 121 57.0
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 7.9e-36 155.2 123 55.3
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 7.9e-36 155.2 123 57.7
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.3e-35 154.5 133 51.9
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.3e-35 153.7 121 56.2
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 2.3e-35 153.7 123 54.5
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.3e-35 153.7 122 58.2
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 2.3e-35 153.7 122 58.2
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 2.3e-35 153.7 122 55.7
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 3.0e-35 153.3 123 54.5
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.0e-35 153.3 122 58.2
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 3.0e-35 153.3 123 54.5
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 5.1e-35 152.5 121 57.9
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 6.7e-35 152.1 123 55.3
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 6.7e-35 152.1 123 53.7
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 6.7e-35 152.1 123 53.7
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 8.7e-35 151.8 137 52.6
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 8.7e-35 151.8 134 52.2
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 8.7e-35 151.8 122 57.4
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 8.7e-35 151.8 133 54.1
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 8.7e-35 151.8 121 56.2
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.1e-34 151.4 123 55.3
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.1e-34 151.4 128 57.8
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.1e-34 151.4 133 52.6
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 1.5e-34 151.0 123 56.1
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 1.5e-34 151.0 122 56.6
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.5e-34 151.0 128 55.5
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.5e-34 151.0 123 53.7
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.5e-34 151.0 122 54.1
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 1.9e-34 150.6 123 55.3
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 5.6e-34 149.1 123 55.3
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 7.4e-34 148.7 128 53.1
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 9.6e-34 148.3 119 55.5
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 9.6e-34 148.3 135 54.1
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.3e-33 147.9 123 52.0
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.6e-33 147.5 122 52.5
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.6e-33 147.5 122 56.6
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.6e-33 147.5 131 52.7
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.1e-33 147.1 128 55.5
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 2.8e-33 146.7 125 52.8
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 3.7e-33 146.4 124 53.2
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 3.7e-33 146.4 125 55.2
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 4.8e-33 146.0 133 51.9
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 6.2e-33 145.6 131 53.4
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 8.2e-33 145.2 116 55.2
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 8.2e-33 145.2 123 52.8
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 8.2e-33 145.2 147 46.3
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 8.2e-33 145.2 147 46.3
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 8.2e-33 145.2 122 53.3
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.1e-32 144.8 122 51.6
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.4e-32 144.4 123 50.4
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 1.4e-32 144.4 133 51.1
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 1.4e-32 144.4 122 54.1
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 1.4e-32 144.4 122 53.3
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.8e-32 144.1 122 51.6
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.8e-32 144.1 148 48.0
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 3.1e-32 143.3 122 54.1
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 4.0e-32 142.9 147 45.6
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 4.0e-32 142.9 122 54.1
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 4.0e-32 142.9 114 57.9
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 3.4e-31 139.8 112 55.4
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 6.5e-30 135.6 113 54.0
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 8.4e-30 135.2 128 48.4
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 4.2e-29 132.9 121 51.2
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 2.1e-28 130.6 107 55.1
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 2.7e-28 130.2 120 55.8
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.7e-28 130.2 94 63.8
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 4.3e-26 122.9 80 67.5
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.3e-25 121.3 125 48.0
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 6.3e-25 119.0 106 55.7
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 2.4e-24 117.1 106 51.9
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 5.3e-24 115.9 82 61.0
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 6.9e-24 115.5 95 56.8
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 9.0e-24 115.2 101 54.5
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 1.3e-22 111.3 140 43.6
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.2e-21 106.7 80 58.8
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.6e-20 103.2 80 58.8
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 3.6e-20 103.2 150 40.7
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 7.4e-18 95.5 63 66.7
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.5e-15 87.8 63 65.1
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 1.5e-15 87.8 63 65.1
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 2.9e-14 83.6 65 56.9
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 2.4e-08 63.9 135 31.1
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 7.7e-07 58.9 44 52.3


User provided reference genes

Program Settings