Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15616 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.8e-60 234.6 114 100.0
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 9.6e-11 70.5 77 44.2
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 9.0e-09 63.9 62 50.0
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.2e-08 63.5 65 53.8
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.5e-08 63.2 66 47.0
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.5e-08 63.2 62 50.0
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.5e-08 63.2 77 41.6
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 3.4e-08 62.0 77 41.6
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 5.8e-08 61.2 65 52.3
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 7.6e-08 60.8 62 48.4
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 2.2e-07 59.3 62 46.8
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.9e-07 58.9 62 46.8
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 3.8e-07 58.5 62 50.0
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 6.4e-07 57.8 74 40.5
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 8.4e-07 57.4 61 44.3
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 8.4e-07 57.4 61 44.3
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 8.4e-07 57.4 62 45.2
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 8.4e-07 57.4 77 42.9
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.1e-06 57.0 68 42.6
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.1e-06 57.0 65 47.7
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 1.9e-06 56.2 77 37.7
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.9e-06 56.2 76 38.2
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.9e-06 56.2 56 46.4
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 3.2e-06 55.5 75 36.0
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 3.2e-06 55.5 70 37.1
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 3.2e-06 55.5 56 44.6
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 3.2e-06 55.5 70 37.1
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 3.2e-06 55.5 66 42.4
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 4.2e-06 55.1 62 43.5
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 4.2e-06 55.1 65 46.2
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 5.5e-06 54.7 76 36.8
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 5.5e-06 54.7 64 39.1
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 5.5e-06 54.7 60 40.0
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 9.3e-06 53.9 64 40.6
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 9.3e-06 53.9 78 33.3


User provided reference genes

Program Settings