Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 5.8e-112 407.5 201 100.0
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 8.9e-28 127.9 79 82.3
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.4e-27 125.6 79 81.0
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 3.1e-20 102.8 79 64.6
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 3.1e-20 102.8 79 64.6
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 4.0e-20 102.4 79 64.6
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 9.0e-20 101.3 79 59.5
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.2e-19 100.9 79 64.6
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 9.9e-19 97.8 79 58.2
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 9.9e-19 97.8 79 60.8
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 1.7e-18 97.1 79 59.5
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.7e-18 97.1 79 60.8
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 3.8e-18 95.9 79 60.8
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 4.9e-18 95.5 79 59.5
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 6.4e-18 95.1 79 59.5
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 6.4e-18 95.1 79 58.2
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 6.4e-18 95.1 79 59.5
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 6.4e-18 95.1 79 59.5
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 6.4e-18 95.1 79 59.5
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 6.4e-18 95.1 79 58.2
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 8.4e-18 94.7 79 59.5
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 8.4e-18 94.7 79 58.2
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 8.4e-18 94.7 79 59.5
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 8.4e-18 94.7 79 59.5
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 8.4e-18 94.7 79 59.5
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 8.4e-18 94.7 79 59.5
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 8.4e-18 94.7 79 59.5
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 1.1e-17 94.4 79 53.2
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.4e-17 94.0 79 62.0
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 1.4e-17 94.0 79 59.5
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 1.4e-17 94.0 79 59.5
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.9e-17 93.6 79 58.2
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.9e-17 93.6 79 58.2
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.9e-17 93.6 79 58.2
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 2.4e-17 93.2 79 58.2
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 2.4e-17 93.2 79 58.2
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 2.4e-17 93.2 79 58.2
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 2.4e-17 93.2 79 58.2
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 4.2e-17 92.4 79 58.2
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 4.2e-17 92.4 79 58.2
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 4.2e-17 92.4 79 58.2
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 4.2e-17 92.4 78 59.0
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 4.2e-17 92.4 78 59.0
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 4.2e-17 92.4 79 57.0
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 4.2e-17 92.4 79 57.0
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 5.4e-17 92.0 79 58.2
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 5.4e-17 92.0 79 57.0
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 5.4e-17 92.0 79 57.0
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 5.4e-17 92.0 79 57.0
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 5.4e-17 92.0 79 57.0
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 5.4e-17 92.0 79 57.0
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 5.4e-17 92.0 78 59.0
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 7.1e-17 91.7 78 59.0
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 7.1e-17 91.7 79 58.2
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 7.1e-17 91.7 79 58.2
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 9.3e-17 91.3 79 57.0
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 9.3e-17 91.3 79 57.0
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 9.3e-17 91.3 79 57.0
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 9.3e-17 91.3 79 59.5
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 9.3e-17 91.3 79 57.0
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 1.2e-16 90.9 79 58.2
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 58.2
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 58.2
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 58.2
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 58.2
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 1.6e-16 90.5 79 57.0
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 2.1e-16 90.1 79 58.2
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 2.1e-16 90.1 79 57.0
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 2.1e-16 90.1 79 57.0
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 2.1e-16 90.1 78 59.0
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 2.7e-16 89.7 79 57.0
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 2.7e-16 89.7 79 55.7
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 2.7e-16 89.7 79 57.0
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 3.5e-16 89.4 79 55.7
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 4.6e-16 89.0 79 55.7
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 6.0e-16 88.6 79 57.0
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 6.0e-16 88.6 79 55.7
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 6.0e-16 88.6 79 57.0
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 7.8e-16 88.2 78 57.7
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 7.8e-16 88.2 79 55.7
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 7.8e-16 88.2 79 55.7
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 7.8e-16 88.2 79 55.7
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 7.8e-16 88.2 79 55.7
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 1.0e-15 87.8 79 54.4
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 1.0e-15 87.8 78 56.4
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 1.3e-15 87.4 79 53.2
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 1.3e-15 87.4 79 55.7
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 1.7e-15 87.0 78 57.7
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 3.0e-15 86.3 79 54.4
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 3.0e-15 86.3 79 55.7
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 3.0e-15 86.3 79 55.7
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 3.0e-15 86.3 79 55.7
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 3.0e-15 86.3 79 55.7
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 3.0e-15 86.3 79 55.7
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 5.1e-15 85.5 79 54.4
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 5.1e-15 85.5 79 54.4
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 5.1e-15 85.5 79 54.4
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 6.6e-15 85.1 79 54.4
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 6.6e-15 85.1 79 54.4
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 6.6e-15 85.1 79 55.7
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 1.1e-14 84.3 79 53.2
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 1.1e-14 84.3 79 53.2
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 1.5e-14 84.0 77 54.5
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 5.6e-14 82.0 79 51.9
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 7.3e-14 81.6 69 58.0
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 9.6e-14 81.3 74 54.1
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 6.2e-13 78.6 79 50.6
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 6.2e-13 78.6 79 49.4
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 4.9e-10 68.9 70 42.9
SEGI_28044 Sequoiadendron giganteum HOM05D000356 ORTHO05D000265 6.7e-07 58.5 38 73.7


User provided reference genes

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