Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 4.6e-100 367.9 181 100.0
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 1.7e-25 120.2 96 60.4
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 1.7e-25 120.2 113 55.8
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.7e-25 119.0 96 60.4
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.4e-24 117.1 96 60.4
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 1.9e-24 116.7 96 61.5
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 5.4e-24 115.2 96 60.4
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 7.0e-24 114.8 96 58.3
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 9.2e-24 114.4 96 60.4
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 9.2e-24 114.4 97 60.8
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.2e-23 114.0 90 62.2
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 1.2e-23 114.0 99 55.6
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.6e-23 113.6 96 60.4
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 2.1e-23 113.2 91 62.6
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 2.1e-23 113.2 91 62.6
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 2.1e-23 113.2 96 57.3
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.5e-23 112.5 96 59.4
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 3.5e-23 112.5 99 55.6
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.5e-23 112.5 96 57.3
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 3.5e-23 112.5 90 61.1
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 3.5e-23 112.5 96 57.3
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 4.6e-23 112.1 96 58.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 4.6e-23 112.1 97 62.9
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 6.0e-23 111.7 96 58.3
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 7.8e-23 111.3 96 59.4
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 7.8e-23 111.3 96 58.3
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.0e-22 110.9 96 57.3
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.0e-22 110.9 98 60.2
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.0e-22 110.9 96 56.2
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 1.3e-22 110.5 96 58.3
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 2.3e-22 109.8 90 60.0
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 2.3e-22 109.8 96 57.3
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 3.0e-22 109.4 96 56.2
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.9e-22 109.0 96 58.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 6.6e-22 108.2 104 56.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 6.6e-22 108.2 97 56.7
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 6.6e-22 108.2 97 58.8
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.6e-22 108.2 96 56.2
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.6e-22 108.2 96 56.2
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 8.6e-22 107.8 91 60.4
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 8.6e-22 107.8 91 60.4
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 8.6e-22 107.8 96 57.3
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 8.6e-22 107.8 97 58.8
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 1.1e-21 107.5 113 51.3
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 1.1e-21 107.5 96 57.3
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.1e-21 107.5 96 57.3
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 1.1e-21 107.5 96 57.3
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.1e-21 107.5 90 60.0
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.5e-21 107.1 104 56.7
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.5e-21 107.1 96 55.2
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 1.5e-21 107.1 96 54.2
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.9e-21 106.7 90 60.0
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.9e-21 106.7 90 60.0
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.9e-21 106.7 90 60.0
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.9e-21 106.7 90 60.0
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.5e-21 106.3 96 59.4
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 2.5e-21 106.3 101 57.4
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 3.3e-21 105.9 96 55.2
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 3.3e-21 105.9 96 55.2
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 4.3e-21 105.5 99 55.6
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 4.3e-21 105.5 95 56.8
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 4.3e-21 105.5 95 56.8
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 4.3e-21 105.5 90 60.0
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 4.3e-21 105.5 96 56.2
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 4.3e-21 105.5 101 57.4
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 4.3e-21 105.5 96 57.3
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.6e-21 105.1 90 60.0
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 5.6e-21 105.1 90 60.0
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.6e-21 105.1 97 56.7
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 7.3e-21 104.8 90 58.9
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 9.5e-21 104.4 90 58.9
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 9.5e-21 104.4 96 55.2
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 9.5e-21 104.4 90 58.9
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 9.5e-21 104.4 100 57.0
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 9.5e-21 104.4 92 56.5
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.6e-20 103.6 91 57.1
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.6e-20 103.6 96 55.2
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.1e-20 103.2 91 57.1
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 2.8e-20 102.8 96 56.2
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.8e-20 102.8 91 57.1
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.8e-20 102.8 91 57.1
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 2.8e-20 102.8 91 57.1
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 3.6e-20 102.4 96 53.1
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 3.6e-20 102.4 96 54.2
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 3.6e-20 102.4 147 42.2
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 4.7e-20 102.1 95 55.8
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 4.7e-20 102.1 99 56.6
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 6.2e-20 101.7 90 58.9
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 6.2e-20 101.7 94 54.3
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 6.2e-20 101.7 96 54.2
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.4e-19 100.5 98 54.1
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.8e-19 100.1 96 54.2
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 1.8e-19 100.1 94 52.1
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 2.3e-19 99.8 88 55.7
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 4.0e-19 99.0 100 52.0
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 5.2e-19 98.6 93 58.1
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 5.2e-19 98.6 96 53.1
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 6.8e-19 98.2 91 58.2
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 8.9e-19 97.8 95 53.7
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.2e-18 97.4 95 54.7
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 3.4e-18 95.9 88 54.5
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.1e-16 90.9 98 50.0
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.9e-16 90.1 96 52.1
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 2.4e-16 89.7 62 72.6
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 4.6e-15 85.5 61 67.2
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 6.6e-14 81.6 168 38.1
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.1e-13 80.9 61 62.3
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.9e-13 80.1 96 47.9
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.2e-12 77.4 118 42.4
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 6.8e-11 71.6 99 41.4
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 2.6e-10 69.7 59 50.8
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 4.4e-10 68.9 43 72.1
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 5.8e-10 68.6 65 50.8
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 2.2e-09 66.6 35 85.7
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.8e-09 65.9 91 44.0
SEGI_19605 Sequoiadendron giganteum HOM05D000878 ORTHO05D001408 1.1e-08 64.3 85 44.7
SEGI_02849 Sequoiadendron giganteum HOM05D000534 ORTHO05D000389 7.1e-08 61.6 86 43.0
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 9.3e-08 61.2 54 55.6
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 1.2e-07 60.8 91 40.7
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 3.5e-07 59.3 55 50.9
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.7e-06 57.0 96 37.5
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 5.1e-06 55.5 54 48.1


User provided reference genes

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