Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 0.0e+00 2159.8 1054 100.0
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 0.0e+00 1523.8 990 77.8
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 0.0e+00 1077.0 1018 54.2
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.3e-308 1063.1 1014 53.6
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 3.5e-301 1038.5 1054 51.8
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.9e-299 1032.7 1045 51.4
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 3.7e-298 1028.5 1020 51.9
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 1.0e-295 1020.4 1018 52.1
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 1.4e-294 1016.5 1017 50.8
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 5.7e-291 1004.6 1043 50.2
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 8.2e-290 1000.7 1017 51.2
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 8.2e-290 1000.7 1011 51.6
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 8.2e-290 1000.7 1051 49.9
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 9.1e-289 997.3 992 51.2
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 7.7e-288 994.2 1014 51.6
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 5.0e-287 991.5 1021 51.0
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.4e-286 989.9 1021 50.9
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 7.9e-285 984.2 1049 49.0
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.7e-282 976.5 1021 50.3
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 3.7e-282 975.3 1020 50.2
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 3.7e-282 975.3 1017 49.5
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 8.2e-282 974.2 1016 49.7
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 2.4e-281 972.6 981 52.5
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 3.1e-281 972.2 994 51.2
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 6.9e-281 971.1 1017 50.4
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 1.5e-280 969.9 1022 49.7
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 4.5e-280 968.4 1017 50.5
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 1.0e-279 967.2 1011 51.1
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.7e-279 966.5 994 50.9
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 3.8e-279 965.3 1013 50.2
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 3.8e-279 965.3 1045 49.2
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 1.9e-278 963.0 1041 49.4
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 3.2e-278 962.2 1042 49.2
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 3.9e-276 955.3 1047 48.1
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 6.7e-276 954.5 1004 49.9
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 2.0e-275 953.0 1051 48.0
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 2.6e-275 952.6 992 50.0
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 3.8e-271 938.7 932 52.3
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 1.1e-270 937.2 943 52.4
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 3.3e-267 925.6 1002 49.3
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 2.8e-266 922.5 1020 48.0
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 1.1e-265 920.6 987 47.7
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 1.7e-263 913.3 1014 46.7
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 1.7e-263 913.3 992 49.2
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.2e-263 912.9 1037 48.1
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 3.4e-259 899.0 943 50.1
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 9.1e-257 891.0 1141 43.5
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 3.5e-256 889.0 948 49.5
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 1.6e-253 880.2 986 47.9
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 1.5e-251 873.6 1042 45.4
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 5.7e-251 871.7 946 49.2
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 2.2e-250 869.8 975 47.7
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 2.4e-249 866.3 881 51.1
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 4.1e-249 865.5 1055 45.1
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 2.5e-246 856.3 949 48.2
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 4.4e-243 845.5 954 47.1
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 2.8e-237 826.2 1018 43.8
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 8.9e-236 821.2 991 43.8
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.6e-232 810.4 998 45.8
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 4.9e-226 788.9 1014 43.9
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 2.4e-225 786.6 947 46.5
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 3.6e-221 772.7 825 50.4
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 1.9e-217 760.4 825 49.2
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.4e-212 744.2 856 46.7
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 4.6e-208 729.2 1100 40.8
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 1.1e-204 718.0 833 46.2
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 8.1e-197 691.8 748 50.0
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 7.9e-184 648.7 746 48.3
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 6.7e-183 645.6 737 46.8
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 5.7e-158 562.8 464 58.4
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 3.7e-149 533.5 412 61.2
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 1.0e-146 525.4 656 44.7
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 5.7e-134 483.0 525 49.3
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 3.3e-129 467.2 504 49.6
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 9.5e-105 386.0 523 42.4
QL07p038322 Quercus lobata HOM05D007235 ORTHO05D008985 3.2e-100 370.9 368 50.5
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.6e-96 358.6 383 52.5
MBI17_g48244_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.2e-91 342.4 364 49.2
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 1.7e-90 338.6 269 59.5
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 2.7e-83 314.7 480 39.8
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 6.2e-80 303.5 222 64.4
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 2.4e-71 275.0 238 56.7
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 7.1e-68 263.5 214 58.4
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 2.7e-67 261.5 204 60.3
COL.COLO4_29681 Corchorus olitorius HOM05D007235 ORTHO05D008985 3.3e-65 254.6 380 39.2
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.9e-60 238.8 198 59.6
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 3.4e-54 218.0 206 49.5
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 8.8e-42 176.8 128 64.1
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.0e-41 175.6 149 55.7
RcHm_v2.0_Chr3g0474631 Rosa chinensis HOM05D007235 ORTHO05D008985 4.0e-26 124.8 102 58.8
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 8.8e-26 123.6 891 22.7
MD14G1029500 Malus domestica HOM05D007235 ORTHO05D008985 3.5e-14 85.1 54 72.2
Cfa016638 Carpinus fangiana HOM05D007235 ORTHO05D008985 5.9e-14 84.3 83 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1996 Anthoceros agrestis HOM05D007235 ORTHO05D008985 1.2e-11 76.6 91 39.6


User provided reference genes

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