Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15237 Sequoiadendron giganteum HOM05D004053 ORTHO05D005065 3.6e-269 931.0 475 100.0
TAR362G1031 Trochodendron aralioides HOM05D004053 ORTHO05D005065 1.0e-29 135.6 417 28.8
Nn4g26160 Nelumbo nucifera HOM05D004053 ORTHO05D005065 9.5e-28 129.0 392 29.3
Haze_04757 Corylus avellana HOM05D004053 ORTHO05D005065 2.6e-25 120.9 426 27.2
Duzib138G0912 Durio zibethinus HOM05D004053 ORTHO05D005065 3.4e-25 120.6 397 27.2
Manes.01G210500 Manihot esculenta HOM05D004053 ORTHO05D005065 3.4e-25 120.6 397 26.4
Gorai.008G005800 Gossypium raimondii HOM05D004053 ORTHO05D005065 5.8e-25 119.8 395 26.1
Gohir.D12G005800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 7.5e-25 119.4 395 26.3
Rhsim13G0022200 Rhododendron simsii HOM05D004053 ORTHO05D005065 7.5e-25 119.4 391 28.4
Potri.002G215800 Populus trichocarpa HOM05D004053 ORTHO05D005065 2.9e-24 117.5 436 27.3
Duzib133G0805 Durio zibethinus HOM05D004053 ORTHO05D005065 6.4e-24 116.3 390 27.7
Potri.014G138200 Populus trichocarpa HOM05D004053 ORTHO05D005065 1.1e-23 115.5 391 27.4
CSS0023044 Camellia sinensis var. sinensis HOM05D004053 ORTHO05D005065 1.4e-23 115.2 393 28.0
Gohir.A12G006400 Gossypium hirsutum HOM05D004053 ORTHO05D005065 1.4e-23 115.2 395 25.8
Atru.chr5.1352 Acer truncatum HOM05D004053 ORTHO05D005065 1.9e-23 114.8 420 25.7
Cfa006097 Carpinus fangiana HOM05D004053 ORTHO05D005065 1.2e-22 112.1 411 26.5
Thecc.01G284500 Theobroma cacao HOM05D004053 ORTHO05D005065 1.6e-22 111.7 472 24.8
Ciclev10020315m.g Citrus clementina HOM05D004053 ORTHO05D005065 2.0e-22 111.3 415 26.3
Nn1g02136 Nelumbo nucifera HOM05D004053 ORTHO05D005065 2.0e-22 111.3 358 27.4
Lalb_Chr21g0306591 Lupinus albus HOM05D004053 ORTHO05D005065 1.3e-21 108.6 444 26.8
vmacro02546 Vaccinium macrocarpon HOM05D004053 ORTHO05D005065 3.0e-21 107.5 392 28.1
Hma1.2p1_0257F.1_g103830 Hydrangea macrophylla HOM05D004053 ORTHO05D005065 3.9e-21 107.1 365 29.6
GSVIVG01011074001 Vitis vinifera HOM05D004053 ORTHO05D005065 3.9e-21 107.1 421 26.4
Aqoxy5G00541 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 1.1e-20 105.5 397 27.2
FAN24G1933 Fragaria x ananassa HOM05D004053 ORTHO05D005065 1.1e-20 105.5 411 25.8
FAN20G0349 Fragaria x ananassa HOM05D004053 ORTHO05D005065 1.5e-20 105.1 411 25.5
QL12p022856 Quercus lobata HOM05D004053 ORTHO05D005065 1.5e-20 105.1 409 26.4
FvH4_2g24050 Fragaria vesca HOM05D004053 ORTHO05D005065 2.5e-20 104.4 411 25.8
PSO832G4321 Papaver somniferum HOM05D004053 ORTHO05D005065 2.5e-20 104.4 394 26.4
Duzib211G0472 Durio zibethinus HOM05D004053 ORTHO05D005065 3.3e-20 104.0 397 26.2
Sabra14G0104300 Salix brachista HOM05D004053 ORTHO05D005065 4.3e-20 103.6 404 26.7
TPR.G32826 Trifolium pratense HOM05D004053 ORTHO05D005065 9.5e-20 102.4 386 26.7
Aqoxy2G03230 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 1.2e-19 102.1 404 25.7
CiPaw.07G095100 Carya illinoinensis HOM05D004053 ORTHO05D005065 1.2e-19 102.1 481 26.2
Actinidia24316 Actinidia chinensis HOM05D004053 ORTHO05D005065 1.6e-19 101.7 395 28.1
Zm00001eb417790 Zea mays HOM05D004053 ORTHO05D005065 2.1e-19 101.3 396 26.8
Prupe.8G245900 Prunus persica HOM05D004053 ORTHO05D005065 3.6e-19 100.5 415 25.3
FAN15G3549 Fragaria x ananassa HOM05D004053 ORTHO05D005065 4.7e-19 100.1 411 25.1
Cpa.g.sc9.119 Carica papaya HOM05D004053 ORTHO05D005065 6.2e-19 99.8 395 26.1
Nitab4.5_0008204g0020 Nicotiana tabacum HOM05D004053 ORTHO05D005065 6.2e-19 99.8 391 26.3
Lalb_Chr06g0163121 Lupinus albus HOM05D004053 ORTHO05D005065 8.0e-19 99.4 402 26.6
DCAR_012450 Daucus carota HOM05D004053 ORTHO05D005065 1.1e-18 99.0 421 25.4
Cc01_g19820 Coffea canephora HOM05D004053 ORTHO05D005065 1.4e-18 98.6 412 24.5
DCAR_005821 Daucus carota HOM05D004053 ORTHO05D005065 5.2e-18 96.7 390 26.2
Glyma.02G149700 Glycine max HOM05D004053 ORTHO05D005065 8.9e-18 95.9 391 27.4
FAN27G0975 Fragaria x ananassa HOM05D004053 ORTHO05D005065 1.2e-17 95.5 417 24.2
Peaxi162Scf00777g00211 Petunia axillaris HOM05D004053 ORTHO05D005065 1.5e-17 95.1 411 25.1
RcHm_v2.0_Chr6g0291821 Rosa chinensis HOM05D004053 ORTHO05D005065 3.4e-17 94.0 417 24.2
CiPaw.08G102900 Carya illinoinensis HOM05D004053 ORTHO05D005065 4.4e-17 93.6 388 25.0
MSTRG.21579 Avicennia marina HOM05D004053 ORTHO05D005065 5.8e-17 93.2 391 24.8
CANSAT25G0924 Cannabis sativa HOM05D004053 ORTHO05D005065 5.8e-17 93.2 416 25.7
Medtr1g089980 Medicago truncatula HOM05D004053 ORTHO05D005065 1.7e-16 91.7 390 24.9
Nitab4.5_0001323g0010 Nicotiana tabacum HOM05D004053 ORTHO05D005065 2.2e-16 91.3 424 24.8
Psat3g065760 Pisum sativum HOM05D004053 ORTHO05D005065 2.9e-16 90.9 388 25.3
Thhalv10028686m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 3.7e-16 90.5 416 23.3
Lj1C43T4 Lonicera japonica HOM05D004053 ORTHO05D005065 3.7e-16 90.5 483 24.6
SalBow6G4695 Salvia bowleyana HOM05D004053 ORTHO05D005065 4.9e-16 90.1 394 24.6
Phvul.007G169200 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 6.4e-16 89.7 227 32.6
ATR0665G655 Amborella trichopoda HOM05D004053 ORTHO05D005065 1.1e-15 89.0 405 26.2
ClCG07G000110 Citrullus lanatus HOM05D004053 ORTHO05D005065 1.4e-15 88.6 168 33.9
Oeu011173.1 Olea europaea HOM05D004053 ORTHO05D005065 2.4e-15 87.8 407 24.8
Os05g0143300 Oryza sativa ssp. japonica HOM05D004053 ORTHO05D005065 2.4e-15 87.8 400 25.2
Eucgr.K03405 Eucalyptus grandis HOM05D004053 ORTHO05D005065 3.2e-15 87.4 170 34.1
Sp6g02950 Schrenkiella parvula HOM05D004053 ORTHO05D005065 4.1e-15 87.0 415 23.4
Glyma.10G024200 Glycine max HOM05D004053 ORTHO05D005065 7.0e-15 86.3 391 24.0
MELO3C014420.2 Cucumis melo HOM05D004053 ORTHO05D005065 9.2e-15 85.9 169 32.5
CARHR251290 Cardamine hirsuta HOM05D004053 ORTHO05D005065 1.2e-14 85.5 436 24.3
Sc05g0005080 Simmondsia chinensis HOM05D004053 ORTHO05D005065 1.2e-14 85.5 393 27.5
Dinv11260 Davidia involucrata HOM05D004053 ORTHO05D005065 1.6e-14 85.1 346 28.0
CsaV3_6G036930 Cucumis sativus L. HOM05D004053 ORTHO05D005065 2.1e-14 84.7 167 31.7
Psat6g168840 Pisum sativum HOM05D004053 ORTHO05D005065 2.7e-14 84.3 392 23.5
VMungo0720G1290 Vigna mungo HOM05D004053 ORTHO05D005065 2.7e-14 84.3 226 33.6
MD11G1290800 Malus domestica HOM05D004053 ORTHO05D005065 3.5e-14 84.0 389 24.7
Solyc09g072990.3 Solanum lycopersicum HOM05D004053 ORTHO05D005065 3.5e-14 84.0 407 24.1
TWI14G1274 Tripterygium wilfordii HOM05D004053 ORTHO05D005065 3.5e-14 84.0 191 31.9
Lj2A1179G44 Lonicera japonica HOM05D004053 ORTHO05D005065 4.6e-14 83.6 394 26.4
PGR044G2575 Punica granatum HOM05D004053 ORTHO05D005065 4.6e-14 83.6 172 33.7
Migut.D00258 Erythranthe guttata HOM05D004053 ORTHO05D005065 6.0e-14 83.2 389 23.9
PGSC0003DMG400003799 Solanum tuberosum HOM05D004053 ORTHO05D005065 7.8e-14 82.8 408 23.8
Gohir.D11G124800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 1.0e-13 82.4 169 32.0
BraA03t12252Z Brassica rapa HOM05D004053 ORTHO05D005065 1.7e-13 81.6 414 23.4
Sed0017907 Sechium edule HOM05D004053 ORTHO05D005065 1.7e-13 81.6 167 30.5
arahy.Tifrunner.gnm1.ann1.V8R19R Arachis hypogaea HOM05D004053 ORTHO05D005065 2.3e-13 81.3 177 29.9
SGA_v2.0_scaffold1G00444 Striga asiatica HOM05D004053 ORTHO05D005065 2.3e-13 81.3 390 22.8
C03p37430 Brassica napus HOM05D004053 ORTHO05D005065 3.0e-13 80.9 413 23.2
BolC3t16035H Brassica oleracea HOM05D004053 ORTHO05D005065 3.0e-13 80.9 413 23.2
Gorai.007G133800 Gossypium raimondii HOM05D004053 ORTHO05D005065 3.0e-13 80.9 169 31.4
Sopen09g028800 Solanum pennellii HOM05D004053 ORTHO05D005065 3.0e-13 80.9 406 23.2
A03p30730 Brassica napus HOM05D004053 ORTHO05D005065 3.9e-13 80.5 414 23.4
THA.LOC104801216 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 3.9e-13 80.5 396 23.5
AagrBONN_evm.TU.Sc2ySwM_117.315 Anthoceros agrestis HOM05D049954 ORTHO05D005065 6.6e-13 79.7 180 35.0
AT4G02920 Arabidopsis thaliana HOM05D004053 ORTHO05D005065 6.6e-13 79.7 395 23.8
arahy.Tifrunner.gnm1.ann1.K8THJN Arachis hypogaea HOM05D004053 ORTHO05D005065 6.6e-13 79.7 177 29.9
CDE11G0853 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 8.6e-13 79.3 187 29.9
Aa31LG5G2500 Aethionema arabicum HOM05D004053 ORTHO05D005065 1.1e-12 79.0 422 23.9
Carub.0006s3417 Capsella rubella HOM05D004053 ORTHO05D005065 1.1e-12 79.0 395 23.8
Lj5g0001920 Lotus japonicus HOM05D004053 ORTHO05D005065 2.5e-12 77.8 168 31.5
Oeu041712.1 Olea europaea HOM05D004053 ORTHO05D005065 2.5e-12 77.8 179 32.4
Ca_10403_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 3.3e-12 77.4 287 28.2
CDE05G2296 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 4.3e-12 77.0 187 29.9
AL6G50010 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 7.3e-12 76.3 459 22.7
Phvul.001G148300 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 1.6e-11 75.1 171 34.5
MD03G1269800 Malus domestica HOM05D004053 ORTHO05D005065 6.2e-11 73.2 424 22.6
arahy.Tifrunner.gnm1.ann1.U9BU7H Arachis hypogaea HOM05D004053 ORTHO05D005065 1.8e-10 71.6 261 24.9
Ca_08561_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 2.3e-10 71.2 179 30.2
Ca_08595_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 2.3e-10 71.2 179 30.2
Gohir.A11G120100 Gossypium hirsutum HOM05D004053 ORTHO05D005065 5.2e-10 70.1 169 29.6
THA.LOC104815946 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 6.8e-10 69.7 392 22.2
Glyma.19G153300 Glycine max HOM05D004053 ORTHO05D005065 2.0e-09 68.2 170 31.2
BcaB01g02487 Brassica carinata HOM05D004053 ORTHO05D005065 2.6e-09 67.8 176 29.5
Glyma.03G150700 Glycine max HOM05D004053 ORTHO05D005065 2.6e-09 67.8 170 30.0
Mapoly0009s0096 Marchantia polymorpha HOM05D049954 ORTHO05D005065 3.4e-09 67.4 123 35.0
ECA248G2902 Erigeron canadensis HOM05D004053 ORTHO05D005065 4.4e-09 67.0 192 28.1
HanXRQChr02g0046661 Helianthus annuus HOM05D004053 ORTHO05D005065 2.2e-08 64.7 193 26.9
EL10Ac7g17207 Beta vulgaris HOM05D004053 ORTHO05D005065 3.7e-08 63.9 165 29.1
BcaC01g06723 Brassica carinata HOM05D004053 ORTHO05D005065 1.1e-07 62.4 171 28.7
PSO541G4889 Papaver somniferum HOM05D004053 ORTHO05D005065 1.9e-07 61.6 171 30.4
AUR62033710 Chenopodium quinoa HOM05D004053 ORTHO05D005065 3.2e-07 60.8 178 29.8
AUR62036816 Chenopodium quinoa HOM05D004053 ORTHO05D005065 4.1e-07 60.5 178 29.8
PSO675G9209 Papaver somniferum HOM05D004053 ORTHO05D005065 2.1e-06 58.2 182 29.1


User provided reference genes

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