Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15152 Sequoiadendron giganteum HOM05D005830 ORTHO05D007212 1.6e-250 869.0 464 100.0
Hma1.2p1_0497F.1_g166530 Hydrangea macrophylla HOM05D005830 ORTHO05D007212 7.0e-60 235.7 458 37.3
Aqoxy7G03615 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 4.6e-59 233.0 467 36.4
Ciclev10008496m.g Citrus clementina HOM05D005830 ORTHO05D007212 1.0e-58 231.9 465 35.9
vmacro06159 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 3.0e-58 230.3 463 36.9
Cfa002293 Carpinus fangiana HOM05D005830 ORTHO05D007212 3.3e-57 226.9 466 36.7
TAR636G3280 Trochodendron aralioides HOM05D005830 ORTHO05D007212 9.5e-57 225.3 462 36.4
TWI63G1326 Tripterygium wilfordii HOM05D005830 ORTHO05D007212 1.6e-56 224.6 464 36.6
Atru.chr7.1975 Acer truncatum HOM05D005830 ORTHO05D007212 2.1e-56 224.2 460 35.0
Prupe.7G250400 Prunus persica HOM05D005830 ORTHO05D007212 2.1e-56 224.2 463 35.6
QL02p090253 Quercus lobata HOM05D005830 ORTHO05D007212 2.1e-56 224.2 463 36.1
Nitab4.5_0002267g0050 Nicotiana tabacum HOM05D005830 ORTHO05D007212 3.6e-56 223.4 467 34.9
Haze_25480 Corylus avellana HOM05D005830 ORTHO05D007212 4.7e-56 223.0 465 34.6
Eucgr.C00582 Eucalyptus grandis HOM05D005830 ORTHO05D007212 4.7e-56 223.0 466 35.6
Potri.006G063600 Populus trichocarpa HOM05D005830 ORTHO05D007212 4.7e-56 223.0 461 36.7
Nitab4.5_0000704g0010 Nicotiana tabacum HOM05D005830 ORTHO05D007212 8.0e-56 222.2 467 34.5
TAR625G0228 Trochodendron aralioides HOM05D005830 ORTHO05D007212 8.0e-56 222.2 461 36.0
CANSAT11G0221 Cannabis sativa HOM05D005830 ORTHO05D007212 1.4e-55 221.5 462 35.3
Potri.018G123400 Populus trichocarpa HOM05D005830 ORTHO05D007212 3.1e-55 220.3 458 36.2
FAN28G1643 Fragaria x ananassa HOM05D005830 ORTHO05D007212 4.0e-55 219.9 454 35.9
Lj9A701G52 Lonicera japonica HOM05D005830 ORTHO05D007212 4.0e-55 219.9 474 34.8
CiPaw.03G250100 Carya illinoinensis HOM05D005830 ORTHO05D007212 5.2e-55 219.5 462 34.6
ClCG06G011670 Citrullus lanatus HOM05D005830 ORTHO05D007212 5.2e-55 219.5 463 34.8
Manes.06G045500 Manihot esculenta HOM05D005830 ORTHO05D007212 8.9e-55 218.8 460 35.7
CiPaw.04G176400 Carya illinoinensis HOM05D005830 ORTHO05D007212 1.5e-54 218.0 462 35.5
FAN23G1789 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.5e-54 218.0 454 35.7
Gohir.D05G014900 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.5e-54 218.0 460 36.7
Sabra18G0105100 Salix brachista HOM05D005830 ORTHO05D007212 1.5e-54 218.0 459 35.7
Duzib150G0784 Durio zibethinus HOM05D005830 ORTHO05D007212 2.6e-54 217.2 467 36.8
Gorai.009G015000 Gossypium raimondii HOM05D005830 ORTHO05D007212 7.5e-54 215.7 461 37.1
Dinv41459 Davidia involucrata HOM05D005830 ORTHO05D007212 9.8e-54 215.3 469 35.4
arahy.Tifrunner.gnm1.ann1.N1L3G9 Arachis hypogaea HOM05D005830 ORTHO05D007212 2.2e-53 214.2 458 34.9
Dinv36464 Davidia involucrata HOM05D005830 ORTHO05D007212 2.2e-53 214.2 464 35.3
FvH4_1g02430 Fragaria vesca HOM05D005830 ORTHO05D007212 2.2e-53 214.2 457 35.2
FAN19G1317 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.2e-53 214.2 457 35.2
MBI14_g38128_MAGBIO Magnolia biondii HOM05D005830 ORTHO05D007212 2.2e-53 214.2 466 33.5
Nn8g39584 Nelumbo nucifera HOM05D005830 ORTHO05D007212 2.2e-53 214.2 462 35.1
RcHm_v2.0_Chr2g0087391 Rosa chinensis HOM05D005830 ORTHO05D007212 2.2e-53 214.2 462 35.3
Sc08g0006200 Simmondsia chinensis HOM05D005830 ORTHO05D007212 3.7e-53 213.4 466 34.1
Manes.14G117500 Manihot esculenta HOM05D005830 ORTHO05D007212 4.9e-53 213.0 460 35.0
Sed0009357 Sechium edule HOM05D005830 ORTHO05D007212 1.1e-52 211.8 461 33.6
CsaV3_1G027980 Cucumis sativus L. HOM05D005830 ORTHO05D007212 1.9e-52 211.1 464 32.8
Gohir.A05G013800 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.9e-52 211.1 461 37.3
AUR62013287 Chenopodium quinoa HOM05D005830 ORTHO05D007212 3.2e-52 210.3 471 34.2
Sabra06G0046300 Salix brachista HOM05D005830 ORTHO05D007212 3.2e-52 210.3 458 34.9
MELO3C010295.2 Cucumis melo HOM05D005830 ORTHO05D007212 4.1e-52 209.9 460 32.4
MD02G1021100 Malus domestica HOM05D005830 ORTHO05D007212 1.6e-51 208.0 460 34.1
Nn2g12145 Nelumbo nucifera HOM05D005830 ORTHO05D007212 2.7e-51 207.2 463 34.1
Cpa.g.sc46.60 Carica papaya HOM05D005830 ORTHO05D007212 7.8e-51 205.7 468 35.9
Peaxi162Scf00088g00106 Petunia axillaris HOM05D005830 ORTHO05D007212 1.3e-50 204.9 472 33.3
EL10Ac8g18756 Beta vulgaris HOM05D005830 ORTHO05D007212 1.1e-49 201.8 469 32.6
VMungo1215G0722 Vigna mungo HOM05D005830 ORTHO05D007212 1.1e-49 201.8 456 31.6
Ah.09g224370 Amaranthus hybridus HOM05D005830 ORTHO05D007212 1.5e-49 201.4 471 34.0
MD15G1164200 Malus domestica HOM05D005830 ORTHO05D007212 9.5e-49 198.7 456 34.2
Sopen07g003650 Solanum pennellii HOM05D005830 ORTHO05D007212 1.2e-48 198.4 431 32.7
Cc06_g07840 Coffea canephora HOM05D005830 ORTHO05D007212 2.1e-48 197.6 467 32.1
Solyc07g007660.1 Solanum lycopersicum HOM05D005830 ORTHO05D007212 3.6e-48 196.8 432 32.9
GSVIVG01012831001 Vitis vinifera HOM05D005830 ORTHO05D007212 4.7e-48 196.4 472 33.7
COL.COLO4_15558 Corchorus olitorius HOM05D005830 ORTHO05D007212 8.1e-48 195.7 459 33.8
Thecc.09G135000 Theobroma cacao HOM05D005830 ORTHO05D007212 1.1e-47 195.3 457 34.6
Lalb_Chr13g0301421 Lupinus albus HOM05D005830 ORTHO05D007212 1.8e-47 194.5 480 31.2
Phvul.003G170800 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 1.8e-47 194.5 456 30.7
Lsat_1_v5_gn_5_93541 Lactuca sativa HOM05D005830 ORTHO05D007212 3.1e-47 193.7 466 32.8
PGSC0003DMG400030680 Solanum tuberosum HOM05D005830 ORTHO05D007212 8.9e-47 192.2 431 32.5
HanXRQChr10g0314411 Helianthus annuus HOM05D005830 ORTHO05D007212 5.8e-46 189.5 468 33.3
PGR142G1093 Punica granatum HOM05D005830 ORTHO05D007212 5.8e-46 189.5 450 34.0
CAN.G1382.7 Capsicum annuum HOM05D005830 ORTHO05D007212 2.9e-45 187.2 509 30.6
Glyma.17G109300 Glycine max HOM05D005830 ORTHO05D007212 3.7e-45 186.8 460 31.5
ATR0800G042 Amborella trichopoda HOM05D005830 ORTHO05D007212 4.9e-45 186.4 454 32.8
DCAR_020892 Daucus carota HOM05D005830 ORTHO05D007212 9.2e-44 182.2 456 30.5
Rhsim03G0252000 Rhododendron simsii HOM05D005830 ORTHO05D007212 4.6e-43 179.9 336 37.8
vmacro05164 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 1.3e-42 178.3 453 33.3
Ca_21656_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 5.1e-42 176.4 464 30.2
Rhsim07G0159800 Rhododendron simsii HOM05D005830 ORTHO05D007212 1.1e-41 175.3 452 32.3
HanXRQChr12g0356861 Helianthus annuus HOM05D005830 ORTHO05D007212 1.9e-41 174.5 475 30.9
Dinv05006 Davidia involucrata HOM05D005830 ORTHO05D007212 9.5e-41 172.2 453 31.1
Ciclev10010445m.g Citrus clementina HOM05D005830 ORTHO05D007212 6.2e-40 169.5 459 29.8
QL02p021141 Quercus lobata HOM05D005830 ORTHO05D007212 8.1e-40 169.1 460 31.3
Lj4g0000922 Lotus japonicus HOM05D005830 ORTHO05D007212 1.2e-38 165.2 456 30.3
TPR.G956 Trifolium pratense HOM05D005830 ORTHO05D007212 2.6e-38 164.1 452 29.4
CiPaw.08G009900 Carya illinoinensis HOM05D005830 ORTHO05D007212 7.6e-38 162.5 472 31.1
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 7.6e-38 162.5 356 32.3
Sabra06G0201100 Salix brachista HOM05D005830 ORTHO05D007212 7.6e-38 162.5 470 29.6
Medtr4g115690 Medicago truncatula HOM05D005830 ORTHO05D007212 2.9e-37 160.6 386 30.3
Gohir.D05G058400 Gossypium hirsutum HOM05D005830 ORTHO05D007212 6.4e-37 159.5 461 31.0
Psat4g036280 Pisum sativum HOM05D005830 ORTHO05D007212 1.1e-36 158.7 455 28.1
Gorai.009G059500 Gossypium raimondii HOM05D005830 ORTHO05D007212 1.9e-36 157.9 461 30.8
Thecc.09G021700 Theobroma cacao HOM05D005830 ORTHO05D007212 2.4e-36 157.5 453 32.7
Potri.006G256900 Populus trichocarpa HOM05D005830 ORTHO05D007212 5.4e-36 156.4 459 29.8
Prupe.1G483400 Prunus persica HOM05D005830 ORTHO05D007212 7.1e-36 156.0 465 30.5
MSTRG.10652 Avicennia marina HOM05D005830 ORTHO05D007212 9.2e-36 155.6 416 29.6
Lalb_Chr11g0063651 Lupinus albus HOM05D005830 ORTHO05D007212 1.7e-34 151.4 464 30.8
SalBow1G4219 Salvia bowleyana HOM05D005830 ORTHO05D007212 1.7e-34 151.4 393 29.3
Aqoxy4G01850 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 2.3e-34 151.0 304 36.8
CiPaw.07G225200 Carya illinoinensis HOM05D005830 ORTHO05D007212 6.6e-34 149.4 472 30.3
COL.COLO4_18887 Corchorus olitorius HOM05D005830 ORTHO05D007212 8.6e-34 149.1 454 31.1
AUR62011200 Chenopodium quinoa HOM05D005830 ORTHO05D007212 4.3e-33 146.7 240 38.8
RcHm_v2.0_Chr6g0297551 Rosa chinensis HOM05D005830 ORTHO05D007212 1.2e-32 145.2 459 30.3
EL10Ac2g04187 Beta vulgaris HOM05D005830 ORTHO05D007212 1.6e-32 144.8 359 29.0
VMungo1309G0557 Vigna mungo HOM05D005830 ORTHO05D007212 3.6e-32 143.7 466 28.5
Sc06g0000560 Simmondsia chinensis HOM05D005830 ORTHO05D007212 4.7e-32 143.3 375 29.1
Phvul.009G091500 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 6.2e-32 142.9 466 28.1
Lj1g0023135 Lotus japonicus HOM05D005830 ORTHO05D007212 8.1e-32 142.5 459 30.5
Actinidia14593 Actinidia chinensis HOM05D000485 ORTHO05D000341 1.4e-31 141.7 413 27.6
Glyma.04G065400 Glycine max HOM05D005830 ORTHO05D007212 1.8e-31 141.4 412 28.9
Migut.K00413 Erythranthe guttata HOM05D005830 ORTHO05D007212 6.9e-31 139.4 461 28.0
Medtr3g106630 Medicago truncatula HOM05D005830 ORTHO05D007212 6.9e-31 139.4 460 29.1
Cfa013122 Carpinus fangiana HOM05D005830 ORTHO05D007212 7.6e-30 136.0 457 27.8
MD15G1128100 Malus domestica HOM05D005830 ORTHO05D007212 7.6e-30 136.0 469 28.8
Manes.16G124200 Manihot esculenta HOM05D002641 ORTHO05D001537 2.9e-29 134.0 465 26.0
Oeu052743.1 Olea europaea HOM05D005830 ORTHO05D007212 3.8e-29 133.7 468 27.1
Ah.16g104630 Amaranthus hybridus HOM05D000524 ORTHO05D000381 4.9e-29 133.3 354 30.2
FAN15G2262 Fragaria x ananassa HOM05D005830 ORTHO05D007212 6.4e-29 132.9 460 28.3
FAN20G1042 Fragaria x ananassa HOM05D005830 ORTHO05D007212 6.4e-29 132.9 461 28.4
TPR.G3136 Trifolium pratense HOM05D005830 ORTHO05D007212 8.4e-29 132.5 459 27.5
FAN27G1157 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.4e-28 131.0 472 27.5
FvH4_2g28800 Fragaria vesca HOM05D005830 ORTHO05D007212 4.2e-28 130.2 472 27.5
Oeu056965.1 Olea europaea HOM05D005830 ORTHO05D007212 1.2e-27 128.6 431 26.5
Psat5g029840 Pisum sativum HOM05D005830 ORTHO05D007212 2.7e-27 127.5 460 26.7
FAN24G0474 Fragaria x ananassa HOM05D005830 ORTHO05D007212 4.6e-27 126.7 472 27.5
Ca_15753_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 6.0e-27 126.3 457 26.5
Eucgr.C02754 Eucalyptus grandis HOM05D005830 ORTHO05D007212 6.6e-26 122.9 457 27.4
arahy.Tifrunner.gnm1.ann1.TZG1XT Arachis hypogaea HOM05D000451 ORTHO05D000351 3.3e-25 120.6 426 26.5
AUR62012424 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.3e-24 118.6 389 25.7
unitig_0.g2712 Utricularia gibba HOM05D005830 ORTHO05D007212 1.4e-23 115.2 409 25.2
FAN26G3009 Fragaria x ananassa HOM05D005830 ORTHO05D007212 3.4e-22 110.5 230 34.3
HPP92_010549 Vanilla planifolia HOM05D005830 ORTHO05D007212 5.8e-22 109.8 366 27.3
Actinidia26367 Actinidia chinensis HOM05D005830 ORTHO05D007212 8.1e-16 89.4 462 26.4
AUR62031547 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.2e-14 85.5 321 24.3
HPP92_027271 Vanilla planifolia HOM05D005830 ORTHO05D007212 3.8e-13 80.5 238 26.1
Medtr4g014150 Medicago truncatula HOM05D005830 ORTHO05D007212 6.4e-13 79.7 215 28.4
Glyma.01G070700 Glycine max HOM05D002723 ORTHO05D003240 5.1e-10 70.1 118 31.4
Lj7P437T13 Lonicera japonica HOM05D005830 ORTHO05D007212 2.1e-08 64.7 179 29.1
Glyma.06G066550 Glycine max HOM05D005830 ORTHO05D007212 8.2e-08 62.8 119 36.1
Glyma.16G087650 Glycine max HOM05D005830 ORTHO05D007212 1.4e-07 62.0 234 25.2


User provided reference genes

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