Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 0.0e+00 2583.5 1358 100.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 0.0e+00 1093.6 1363 48.4
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 2.3e-305 1052.7 1367 46.6
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 1.7e-295 1020.0 1360 45.0
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 1.8e-289 1000.0 1362 43.8
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 7.1e-286 988.0 1364 44.3
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 9.2e-286 987.6 1366 44.0
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 9.9e-280 967.6 1363 43.3
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 1.7e-279 966.8 1366 43.5
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 2.9e-279 966.1 1278 44.6
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 7.1e-278 961.4 1373 43.5
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 5.1e-276 955.3 1278 44.8
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 5.1e-276 955.3 1362 43.0
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 1.1e-273 947.6 1358 43.0
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 7.6e-272 941.4 1291 44.1
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 2.9e-271 939.5 1365 41.6
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 1.0e-268 931.0 1287 43.7
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 1.8e-268 930.2 1295 43.6
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 5.6e-267 925.2 1359 41.2
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 7.4e-267 924.9 1361 42.0
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 3.4e-264 916.0 1365 41.8
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 4.5e-264 915.6 1362 40.6
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 3.2e-262 909.4 1360 41.5
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 7.1e-262 908.3 1399 41.5
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 2.7e-261 906.4 1266 42.6
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 3.5e-261 906.0 1391 40.1
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 1.8e-260 903.7 1273 43.1
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 3.0e-260 902.9 1274 43.5
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 6.7e-260 901.7 1337 42.1
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 9.6e-259 897.9 1337 41.4
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 9.6e-259 897.9 1278 42.8
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 1.3e-258 897.5 1356 41.0
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 1.6e-258 897.1 1278 43.3
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.1e-257 894.4 1360 41.7
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 1.4e-257 894.0 1290 42.2
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 5.3e-257 892.1 1284 42.9
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 5.3e-257 892.1 1367 41.2
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 9.0e-257 891.3 1360 41.6
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 3.8e-255 885.9 1373 40.6
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 7.1e-254 881.7 1368 40.9
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 2.7e-253 879.8 1348 42.4
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 8.7e-252 874.8 1325 42.7
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 1.9e-251 873.6 1320 42.8
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 1.0e-247 861.3 1340 40.4
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 1.4e-246 857.4 1340 40.5
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 3.9e-244 849.4 1362 39.8
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 1.9e-243 847.0 1358 39.3
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 1.1e-241 841.3 1306 40.4
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 2.9e-239 833.2 1212 41.8
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 2.5e-238 830.1 1368 38.6
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 3.0e-236 823.2 1249 40.4
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 3.9e-236 822.8 1288 39.8
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 1.1e-235 821.2 1289 39.8
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 5.7e-235 818.9 1289 39.6
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 7.4e-235 818.5 1218 41.1
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 2.2e-231 807.0 1288 39.1
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 3.9e-228 796.2 1229 40.0
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 1.7e-226 790.8 1307 40.0
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 7.0e-225 785.4 1253 40.6
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 2.0e-224 783.9 1223 40.6
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 6.5e-223 778.9 1370 37.7
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 2.5e-222 776.9 1128 43.5
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 8.2e-218 761.9 1072 43.8
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 7.2e-214 748.8 1172 40.0
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 4.8e-210 736.1 1290 37.4
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 8.9e-204 715.3 1068 40.5
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 1.9e-198 697.6 1083 41.4
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 1.8e-196 691.0 1079 41.0
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 9.5e-190 668.7 1222 37.4
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 3.6e-189 666.8 1080 38.8
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 6.4e-178 629.4 780 46.2
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 2.3e-175 620.9 965 40.6
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 1.4e-172 611.7 1371 33.6
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 4.6e-168 596.7 780 44.5
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 1.0e-143 515.8 610 48.4
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 4.9e-138 496.9 824 38.3
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 2.3e-127 461.5 1440 29.4
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 1.5e-126 458.8 632 42.9
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 6.1e-120 436.8 539 46.6
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 6.3e-117 426.8 937 33.9
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 1.7e-74 285.8 616 33.9
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 2.1e-67 262.3 463 36.3
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 4.0e-63 248.1 337 44.8
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 2.3e-58 232.3 293 48.5
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 3.2e-52 211.8 302 45.0
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 3.1e-47 195.3 280 45.0
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 2.1e-43 182.6 162 59.3
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 7.9e-35 154.1 210 48.1
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 4.8e-32 144.8 189 42.3
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 1.6e-27 129.8 756 22.5
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 8.4e-21 107.5 112 52.7
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 2.7e-19 102.4 117 47.9
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 1.1e-17 97.1 165 42.4
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 6.3e-16 91.3 126 43.7
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 4.3e-09 68.6 116 40.5
Actinidia14287 Actinidia chinensis HOM05D065619 ORTHO05D037991 9.7e-09 67.4 90 40.0
HanXRQChr03g0089471 Helianthus annuus HOM05D007614 ORTHO05D009538 3.4e-06 58.9 318 23.3


User provided reference genes

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