Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 9.0e-84 313.5 158 100.0
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 5.0e-50 201.4 126 74.6
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 8.5e-50 200.7 126 75.4
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.1e-49 200.3 126 75.4
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 2.5e-49 199.1 126 75.4
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 2.5e-49 199.1 126 73.0
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 4.2e-49 198.4 126 74.6
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.2e-49 198.4 126 74.6
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 4.2e-49 198.4 126 75.4
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 5.5e-49 198.0 126 74.6
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 7.2e-49 197.6 126 74.6
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 7.2e-49 197.6 126 75.4
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 7.2e-49 197.6 126 75.4
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 7.2e-49 197.6 126 75.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 7.2e-49 197.6 126 71.4
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 9.4e-49 197.2 132 69.7
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 9.4e-49 197.2 126 73.8
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 9.4e-49 197.2 126 73.0
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.2e-48 196.8 126 75.4
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.2e-48 196.8 126 73.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.6e-48 196.4 126 73.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.1e-48 196.1 126 74.6
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 2.1e-48 196.1 126 73.8
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.1e-48 196.1 126 72.2
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 3.6e-48 195.3 126 73.8
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 3.6e-48 195.3 127 74.0
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 4.7e-48 194.9 126 74.6
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.7e-48 194.9 126 72.2
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 4.7e-48 194.9 126 73.0
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 4.7e-48 194.9 126 72.2
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 8.0e-48 194.1 126 71.4
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 8.0e-48 194.1 126 71.4
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 8.0e-48 194.1 126 73.8
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.0e-47 193.7 126 73.0
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.0e-47 193.7 126 73.8
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.0e-47 193.7 128 74.2
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.4e-47 193.4 132 71.2
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.4e-47 193.4 126 72.2
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.4e-47 193.4 126 72.2
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.4e-47 193.4 126 71.4
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.8e-47 193.0 126 72.2
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 2.3e-47 192.6 126 74.6
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 2.3e-47 192.6 126 70.6
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 2.3e-47 192.6 126 73.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.0e-47 192.2 126 70.6
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 3.0e-47 192.2 126 71.4
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 3.0e-47 192.2 126 70.6
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 5.2e-47 191.4 126 72.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 5.2e-47 191.4 126 73.0
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 6.8e-47 191.0 126 70.6
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 6.8e-47 191.0 126 73.8
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 6.8e-47 191.0 132 70.5
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 8.8e-47 190.7 126 72.2
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 8.8e-47 190.7 126 73.0
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 8.8e-47 190.7 126 73.0
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 8.8e-47 190.7 126 70.6
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.2e-46 190.3 126 71.4
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.5e-46 189.9 126 71.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.6e-46 189.1 126 71.4
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 3.4e-46 188.7 126 69.0
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 4.4e-46 188.3 126 70.6
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 4.4e-46 188.3 126 70.6
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.4e-46 188.3 126 70.6
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 4.4e-46 188.3 126 70.6
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 5.7e-46 188.0 126 70.6
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 5.7e-46 188.0 126 69.8
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 5.7e-46 188.0 126 70.6
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 70.6
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 7.5e-46 187.6 127 72.4
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 7.5e-46 187.6 126 69.0
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.3e-45 186.8 126 71.4
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.7e-45 186.4 126 69.8
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.7e-45 186.4 126 69.0
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.7e-45 186.4 126 68.3
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.7e-45 186.4 126 72.2
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 3.7e-45 185.3 126 70.6
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 3.7e-45 185.3 126 71.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.8e-45 184.9 126 71.4
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.3e-45 184.5 126 69.8
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 8.3e-45 184.1 126 69.8
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.1e-44 183.7 126 69.8
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.1e-44 183.7 126 70.6
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 1.4e-44 183.3 126 69.0
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.4e-44 183.3 126 68.3
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.4e-44 183.3 126 73.0
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.6e-43 179.9 136 65.4
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 4.0e-39 165.2 117 65.0
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 3.7e-37 158.7 126 65.1
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 6.3e-37 157.9 126 69.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.8e-36 156.4 126 64.3
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.7e-34 149.8 99 66.7
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.7e-34 149.8 96 74.0
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.3e-29 133.7 253 34.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 3.7e-29 132.1 104 59.6
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.8e-28 129.8 126 52.4
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.2e-22 110.5 149 38.9
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.0e-22 109.8 73 69.9
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 2.2e-21 106.3 159 41.5
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 8.3e-21 104.4 129 44.2
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.3e-18 96.3 126 46.0
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.2e-16 90.5 153 40.5
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.6e-16 90.1 77 64.9
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 8.1e-16 87.8 137 40.9
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 3.1e-15 85.9 143 35.0
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 6.8e-15 84.7 55 78.2
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.6e-11 73.6 39 76.9


User provided reference genes

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