Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 3.1e-206 721.5 346 100.0
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 4.7e-125 451.8 324 63.6
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 2.0e-123 446.4 308 65.6
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 9.7e-123 444.1 319 63.6
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.4e-121 440.3 319 63.3
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 9.1e-121 437.6 319 64.6
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.2e-120 437.2 289 68.2
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.5e-120 436.8 313 63.9
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 2.6e-120 436.0 291 68.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 4.5e-120 435.3 317 63.7
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 7.7e-120 434.5 317 63.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.0e-119 434.1 317 63.4
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 1.7e-119 433.3 285 67.4
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.7e-119 433.3 289 67.8
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 2.2e-119 433.0 325 64.0
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.9e-119 432.6 312 64.4
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 8.5e-119 431.0 296 65.5
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.1e-118 430.6 299 66.2
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.5e-118 429.5 317 63.1
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 2.5e-118 429.5 312 64.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 3.2e-118 429.1 323 61.3
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 3.2e-118 429.1 289 67.1
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 7.2e-118 427.9 301 64.8
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.2e-117 427.2 325 62.8
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 2.1e-117 426.4 333 59.2
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 3.6e-117 425.6 302 64.2
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 3.6e-117 425.6 288 66.0
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 4.7e-117 425.2 288 67.0
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 6.1e-117 424.9 299 64.9
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 8.0e-117 424.5 287 67.6
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 2.3e-116 422.9 334 61.1
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 2.3e-116 422.9 315 63.8
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.9e-116 422.2 295 64.7
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 3.9e-116 422.2 284 67.6
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 5.2e-116 421.8 287 65.5
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 6.7e-116 421.4 317 63.1
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 8.8e-116 421.0 328 61.0
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 8.8e-116 421.0 295 65.4
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 8.8e-116 421.0 306 63.7
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.1e-115 420.6 286 66.1
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.5e-115 420.2 306 62.7
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 4.4e-115 418.7 291 65.6
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 4.4e-115 418.7 288 65.6
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 5.7e-115 418.3 293 64.8
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 7.4e-115 417.9 324 60.2
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 7.4e-115 417.9 311 63.7
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 9.7e-115 417.5 294 65.3
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.3e-114 417.2 308 63.6
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 2.2e-114 416.4 327 60.2
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 2.2e-114 416.4 311 61.4
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 6.3e-114 414.8 294 65.0
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 1.4e-113 413.7 295 66.1
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 1.8e-113 413.3 295 66.4
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 1.8e-113 413.3 294 66.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 2.4e-113 412.9 296 64.5
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 3.1e-113 412.5 312 58.7
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.1e-113 412.5 299 62.9
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 4.1e-113 412.1 334 57.8
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 5.3e-113 411.8 294 66.3
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 5.3e-113 411.8 329 60.5
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 7.0e-113 411.4 295 65.1
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 9.1e-113 411.0 334 57.5
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.2e-112 410.6 284 66.5
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.2e-112 410.6 317 60.3
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.6e-112 410.2 314 62.1
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 1.6e-112 410.2 289 62.6
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.6e-112 410.2 291 64.9
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.6e-112 409.5 299 64.9
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 4.5e-112 408.7 295 64.7
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.3e-111 407.1 304 62.8
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.3e-111 407.1 304 62.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 1.3e-111 407.1 304 62.2
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.7e-111 406.8 334 57.5
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.5e-110 402.9 324 59.9
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 3.6e-109 399.1 310 61.3
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 3.6e-109 399.1 296 62.8
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 8.0e-109 397.9 290 62.8
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 5.2e-108 395.2 328 57.0
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.2e-107 394.0 313 60.7
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 2.0e-107 393.3 286 62.6
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.3e-106 390.6 293 61.8
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 5.3e-105 385.2 271 64.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 9.1e-105 384.4 295 60.0
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 6.1e-101 371.7 252 65.9
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.4e-100 370.5 324 56.2
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 3.0e-100 369.4 320 56.9
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 3.4e-99 365.9 248 64.1
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 7.5e-99 364.8 284 60.2
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 3.7e-98 362.5 283 58.7
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 2.4e-97 359.8 278 60.8
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.7e-95 353.6 298 58.1
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 2.5e-94 349.7 247 65.2
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 9.5e-94 347.8 298 54.4
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.6e-93 347.1 245 64.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 7.8e-88 328.2 296 55.1
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 5.2e-84 315.5 227 64.8
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 2.7e-80 303.1 299 50.2
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 4.0e-76 289.3 194 65.5
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 1.9e-62 243.8 156 69.2
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 3.6e-45 186.4 115 68.7
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 8.1e-45 185.3 288 39.9
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.1e-44 184.9 108 74.1
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 2.4e-44 183.7 143 59.4
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.3e-39 167.9 105 72.4
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 8.7e-39 165.2 124 62.9
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.3e-31 141.4 112 58.0
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 8.4e-26 122.1 156 41.7
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.8e-23 114.4 125 48.0
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.3e-21 108.2 86 60.5
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.2e-16 91.7 137 38.7
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-12 78.2 54 64.8
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 7.2e-09 65.9 42 69.0
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 2.7e-08 63.9 43 65.1
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.4e-07 61.6 50 52.0
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.3e-07 60.8 42 61.9


User provided reference genes

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