Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15047 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 2.1e-132 475.7 238 100.0
SEGI_09724 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 3.3e-37 159.5 262 43.5
SEGI_12851 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 5.8e-34 148.7 226 44.7
Ah.06g193140 Amaranthus hybridus HOM05D003200 ORTHO05D003574 1.5e-18 97.4 192 35.4
EL10Ac4g10333 Beta vulgaris HOM05D003200 ORTHO05D003574 3.4e-18 96.3 192 35.9
MBI06_g07796_MAGBIO Magnolia biondii HOM05D003200 ORTHO05D003574 3.4e-18 96.3 177 36.2
Lsat_1_v5_gn_1_68481 Lactuca sativa HOM05D003200 ORTHO05D003574 5.8e-18 95.5 189 37.0
Rhsim13G0227400 Rhododendron simsii HOM05D003200 ORTHO05D003574 7.6e-18 95.1 191 37.2
Hund21653 Selenicereus undatus HOM05D003200 ORTHO05D003574 1.7e-17 94.0 197 34.5
ATR0807G127 Amborella trichopoda HOM05D003200 ORTHO05D003574 2.9e-17 93.2 238 33.6
QL01p009941 Quercus lobata HOM05D003200 ORTHO05D003574 2.9e-17 93.2 172 39.0
Sc16g0011990 Simmondsia chinensis HOM05D003200 ORTHO05D003574 3.8e-17 92.8 197 34.5
TAR623G0555 Trochodendron aralioides HOM05D003200 ORTHO05D003574 3.8e-17 92.8 167 36.5
HanXRQChr11g0345461 Helianthus annuus HOM05D003200 ORTHO05D003574 4.9e-17 92.4 191 36.1
PSO339G4963 Papaver somniferum HOM05D003200 ORTHO05D003574 4.9e-17 92.4 176 38.1
Potri.001G011800 Populus trichocarpa HOM05D003200 ORTHO05D003574 6.4e-17 92.0 195 35.9
Lsat_1_v5_gn_6_49141 Lactuca sativa HOM05D003200 ORTHO05D003574 8.4e-17 91.7 233 33.5
Hma1.2p1_0505F.1_g168170 Hydrangea macrophylla HOM05D003200 ORTHO05D003574 1.1e-16 91.3 167 38.3
Dinv43936 Davidia involucrata HOM05D003200 ORTHO05D003574 1.4e-16 90.9 188 36.2
THA.LOC104811052 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 1.4e-16 90.9 206 35.9
TAR369G0274 Trochodendron aralioides HOM05D003200 ORTHO05D003574 1.4e-16 90.9 236 33.9
Glyma.10G294900 Glycine max HOM05D003200 ORTHO05D003574 1.9e-16 90.5 199 35.7
Glyma.20G244700 Glycine max HOM05D003200 ORTHO05D003574 1.9e-16 90.5 199 35.7
unitig_60.g25721 Utricularia gibba HOM05D003200 ORTHO05D003574 1.9e-16 90.5 170 38.8
Dinv36326 Davidia involucrata HOM05D003200 ORTHO05D003574 2.4e-16 90.1 174 36.8
Phvul.007G005200 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 2.4e-16 90.1 199 35.2
BolC3t13598H Brassica oleracea HOM05D003200 ORTHO05D003574 3.2e-16 89.7 202 36.1
Sc09g0000340 Simmondsia chinensis HOM05D003200 ORTHO05D003574 3.2e-16 89.7 194 33.5
VMungo0720G1305 Vigna mungo HOM05D003200 ORTHO05D003574 3.2e-16 89.7 199 35.7
TWI34G0579 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 4.2e-16 89.4 194 36.1
TAR633G1334 Trochodendron aralioides HOM05D003200 ORTHO05D003574 4.2e-16 89.4 164 37.2
Duzib170G0875 Durio zibethinus HOM05D003200 ORTHO05D003574 5.4e-16 89.0 167 37.7
ECA233G5951 Erigeron canadensis HOM05D003200 ORTHO05D003574 5.4e-16 89.0 257 29.2
Psat6g241840 Pisum sativum HOM05D003200 ORTHO05D003574 7.1e-16 88.6 192 37.5
Actinidia06863 Actinidia chinensis HOM05D003200 ORTHO05D003574 9.3e-16 88.2 199 36.2
CSS0033476 Camellia sinensis var. sinensis HOM05D003200 ORTHO05D003574 9.3e-16 88.2 197 36.0
CiPaw.14G129600 Carya illinoinensis HOM05D003200 ORTHO05D003574 9.3e-16 88.2 199 35.2
Thecc.09G216900 Theobroma cacao HOM05D003200 ORTHO05D003574 9.3e-16 88.2 192 37.0
Ciclev10015088m.g Citrus clementina HOM05D003200 ORTHO05D003574 1.2e-15 87.8 245 33.9
Nitab4.5_0005041g0060 Nicotiana tabacum HOM05D003200 ORTHO05D003574 1.2e-15 87.8 178 38.2
Actinidia06303 Actinidia chinensis HOM05D003200 ORTHO05D003574 1.6e-15 87.4 197 35.0
Ca_02880_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 1.6e-15 87.4 175 36.0
Lj1P478T20 Lonicera japonica HOM05D003200 ORTHO05D003574 1.6e-15 87.4 189 34.4
MD03G1014800 Malus domestica HOM05D003200 ORTHO05D003574 1.6e-15 87.4 187 34.2
Potri.003G214300 Populus trichocarpa HOM05D003200 ORTHO05D003574 1.6e-15 87.4 191 36.1
TWI60G0814 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 1.6e-15 87.4 196 36.2
A03p09700 Brassica napus HOM05D003200 ORTHO05D003574 2.1e-15 87.0 171 38.6
A10p19820 Brassica napus HOM05D003200 ORTHO05D003574 2.1e-15 87.0 176 38.1
BraA03t10286Z Brassica rapa HOM05D003200 ORTHO05D003574 2.1e-15 87.0 202 35.6
BraA10t44058Z Brassica rapa HOM05D003200 ORTHO05D003574 2.1e-15 87.0 176 38.1
Nitab4.5_0003436g0110 Nicotiana tabacum HOM05D003200 ORTHO05D003574 2.1e-15 87.0 178 38.2
SalBow7G0874 Salvia bowleyana HOM05D003200 ORTHO05D003574 2.1e-15 87.0 205 34.1
SalBow7G4053 Salvia bowleyana HOM05D003200 ORTHO05D003574 2.1e-15 87.0 205 34.1
BcaB01g04823 Brassica carinata HOM05D003200 ORTHO05D003574 2.7e-15 86.7 203 35.5
BNapus_Darmor_BZH_scaffold_38p01970 Brassica napus HOM05D003200 ORTHO05D003574 2.7e-15 86.7 183 36.1
COL.COLO4_10428 Corchorus olitorius HOM05D003200 ORTHO05D003574 2.7e-15 86.7 167 37.1
Dinv43495 Davidia involucrata HOM05D003200 ORTHO05D003574 2.7e-15 86.7 185 33.5
Gohir.A05G066600 Gossypium hirsutum HOM05D003200 ORTHO05D003574 2.7e-15 86.7 187 35.3
Gohir.D05G069100 Gossypium hirsutum HOM05D003200 ORTHO05D003574 2.7e-15 86.7 187 35.3
Gorai.009G070100 Gossypium raimondii HOM05D003200 ORTHO05D003574 2.7e-15 86.7 187 35.3
THA.LOC104799746 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 2.7e-15 86.7 201 35.3
BcaB08g36558 Brassica carinata HOM05D003200 ORTHO05D003574 3.5e-15 86.3 176 38.1
C09p56140 Brassica napus HOM05D003200 ORTHO05D003574 3.5e-15 86.3 176 38.1
BolC9t58481H Brassica oleracea HOM05D003200 ORTHO05D003574 3.5e-15 86.3 176 38.1
Lj5g0003842 Lotus japonicus HOM05D003200 ORTHO05D003574 3.5e-15 86.3 199 34.2
MD11G1016000 Malus domestica HOM05D003200 ORTHO05D003574 3.5e-15 86.3 187 34.8
unitig_0.g182 Utricularia gibba HOM05D003200 ORTHO05D003574 3.5e-15 86.3 122 44.3
MSTRG.18395 Avicennia marina HOM05D003200 ORTHO05D003574 4.6e-15 85.9 200 35.0
BolC2t06994H Brassica oleracea HOM05D003200 ORTHO05D003574 4.6e-15 85.9 177 35.6
Thhalv10013350m.g Eutrema salsugineum HOM05D003200 ORTHO05D003574 4.6e-15 85.9 175 37.7
Prupe.6G014100 Prunus persica HOM05D003200 ORTHO05D003574 4.6e-15 85.9 193 35.2
PGR102G1285 Punica granatum HOM05D003200 ORTHO05D003574 4.6e-15 85.9 200 33.5
Sabra01G0008800 Salix brachista HOM05D003200 ORTHO05D003574 4.6e-15 85.9 199 34.2
Aqoxy1G00122 Aquilegia oxysepala HOM05D003200 ORTHO05D003574 6.0e-15 85.5 197 34.0
CARHR192960 Cardamine hirsuta HOM05D003200 ORTHO05D003574 6.0e-15 85.5 172 37.8
Sp6g24480 Schrenkiella parvula HOM05D003200 ORTHO05D003574 6.0e-15 85.5 175 37.7
AL6G31430 Arabidopsis lyrata HOM05D003200 ORTHO05D003574 7.9e-15 85.1 172 37.2
AT5G19900 Arabidopsis thaliana HOM05D003200 ORTHO05D003574 7.9e-15 85.1 172 37.2
BcaC04g19396 Brassica carinata HOM05D003200 ORTHO05D003574 7.9e-15 85.1 176 37.5
A02p05900 Brassica napus HOM05D003200 ORTHO05D003574 7.9e-15 85.1 165 39.4
BraA02t05542Z Brassica rapa HOM05D003200 ORTHO05D003574 7.9e-15 85.1 165 39.4
Carub.0006s1827 Capsella rubella HOM05D003200 ORTHO05D003574 7.9e-15 85.1 172 37.2
CiPaw.13G170600 Carya illinoinensis HOM05D003200 ORTHO05D003574 7.9e-15 85.1 198 33.8
Eucgr.B03639 Eucalyptus grandis HOM05D003200 ORTHO05D003574 7.9e-15 85.1 192 35.9
Medtr1g116330 Medicago truncatula HOM05D003200 ORTHO05D003574 7.9e-15 85.1 192 35.9
C03p11280 Brassica napus HOM05D003200 ORTHO05D003574 1.0e-14 84.7 203 35.0
Lj2P674T26 Lonicera japonica HOM05D003200 ORTHO05D003574 1.0e-14 84.7 194 33.5
TAR636G3550 Trochodendron aralioides HOM05D003200 ORTHO05D003574 1.0e-14 84.7 171 36.3
Cc01_g03340 Coffea canephora HOM05D003200 ORTHO05D003574 1.3e-14 84.3 175 36.6
SGA_v2.0_scaffold8G04634 Striga asiatica HOM05D003200 ORTHO05D003574 1.3e-14 84.3 193 34.7
Cfa009640 Carpinus fangiana HOM05D003200 ORTHO05D003574 1.8e-14 84.0 187 35.8
Migut.D00540 Erythranthe guttata HOM05D003200 ORTHO05D003574 1.8e-14 84.0 177 36.7
Eucgr.B02607 Eucalyptus grandis HOM05D003200 ORTHO05D003574 1.8e-14 84.0 170 34.1
Lalb_Chr06g0164391 Lupinus albus HOM05D003200 ORTHO05D003574 1.8e-14 84.0 192 33.9
RcHm_v2.0_Chr5g0080701 Rosa chinensis HOM05D003200 ORTHO05D003574 1.8e-14 84.0 192 34.9
SalBow2G1492 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.8e-14 84.0 206 34.5
TWI32G0311 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 1.8e-14 84.0 196 35.2
PGR119G1170 Punica granatum HOM05D003200 ORTHO05D003574 2.3e-14 83.6 200 33.0
PGSC0003DMG400024057 Solanum tuberosum HOM05D003200 ORTHO05D003574 2.3e-14 83.6 172 36.6
SGA_v2.0_scaffold1G00760 Striga asiatica HOM05D003200 ORTHO05D003574 2.3e-14 83.6 193 35.2
Duzib150G1584 Durio zibethinus HOM05D003200 ORTHO05D003574 3.0e-14 83.2 172 37.2
ECA248G1666 Erigeron canadensis HOM05D003200 ORTHO05D003574 3.0e-14 83.2 178 37.1
FvH4_3g44330 Fragaria vesca HOM05D003200 ORTHO05D003574 3.0e-14 83.2 192 34.9
FAN11G2071 Fragaria x ananassa HOM05D003200 ORTHO05D003574 3.0e-14 83.2 192 34.9
FAN16G1057 Fragaria x ananassa HOM05D003200 ORTHO05D003574 3.0e-14 83.2 192 34.9
FAN21G1034 Fragaria x ananassa HOM05D003200 ORTHO05D003574 3.0e-14 83.2 192 34.9
FAN25G2592 Fragaria x ananassa HOM05D003200 ORTHO05D003574 3.0e-14 83.2 192 34.9
Nitab4.5_0001512g0020 Nicotiana tabacum HOM05D003200 ORTHO05D003574 3.0e-14 83.2 172 36.0
Nitab4.5_0003671g0060 Nicotiana tabacum HOM05D003200 ORTHO05D003574 3.0e-14 83.2 172 36.0
Peaxi162Scf00780g00043 Petunia axillaris HOM05D003200 ORTHO05D003574 3.0e-14 83.2 168 36.3
Sed0003084 Sechium edule HOM05D003200 ORTHO05D003574 3.0e-14 83.2 196 33.7
Sed0009987 Sechium edule HOM05D003200 ORTHO05D003574 3.0e-14 83.2 224 31.7
CAN.G511.12 Capsicum annuum HOM05D003200 ORTHO05D003574 3.9e-14 82.8 172 36.0
Ca_11388_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 3.9e-14 82.8 192 35.4
Atru.chr3.2140 Acer truncatum HOM05D003200 ORTHO05D003574 5.1e-14 82.4 187 35.8
TPR.G10419 Trifolium pratense HOM05D003200 ORTHO05D003574 5.1e-14 82.4 192 35.4
SalBow2G0964 Salvia bowleyana HOM05D003200 ORTHO05D003574 6.7e-14 82.0 164 35.4
SalBow2G2949 Salvia bowleyana HOM05D003200 ORTHO05D003574 6.7e-14 82.0 209 33.0
MSTRG.17558 Avicennia marina HOM05D003200 ORTHO05D003574 8.7e-14 81.6 199 34.2
CsaV3_4G023710 Cucumis sativus L. HOM05D003200 ORTHO05D003574 8.7e-14 81.6 196 33.2
Gohir.D08G088300 Gossypium hirsutum HOM05D003200 ORTHO05D003574 8.7e-14 81.6 185 35.1
Gorai.004G092700 Gossypium raimondii HOM05D003200 ORTHO05D003574 8.7e-14 81.6 185 35.1
Atru.chr3.2127 Acer truncatum HOM05D003200 ORTHO05D003574 1.1e-13 81.3 187 35.8
CDE02G1896 Ceratophyllum demersum HOM05D003200 ORTHO05D003574 1.1e-13 81.3 154 38.3
AUR62000043 Chenopodium quinoa HOM05D003200 ORTHO05D003574 1.1e-13 81.3 182 34.1
ClCG02G023720 Citrullus lanatus HOM05D003200 ORTHO05D003574 1.1e-13 81.3 198 32.8
MELO3C014647.2 Cucumis melo HOM05D003200 ORTHO05D003574 1.1e-13 81.3 198 32.3
Medtr2g061360 Medicago truncatula HOM05D003200 ORTHO05D003574 1.1e-13 81.3 209 33.5
MELO3C014649.2 Cucumis melo HOM05D003200 ORTHO05D003574 1.5e-13 80.9 195 32.3
CsaV3_4G023690 Cucumis sativus L. HOM05D003200 ORTHO05D003574 1.5e-13 80.9 195 32.3
Manes.03G089900 Manihot esculenta HOM05D003200 ORTHO05D003574 1.5e-13 80.9 199 35.7
unitig_26.g10121 Utricularia gibba HOM05D003200 ORTHO05D003574 1.5e-13 80.9 171 36.3
GSVIVG01025369001 Vitis vinifera HOM05D003200 ORTHO05D003574 1.9e-13 80.5 187 33.2
DCAR_001996 Daucus carota HOM05D003200 ORTHO05D003574 2.5e-13 80.1 169 35.5
Manes.15G103800 Manihot esculenta HOM05D003200 ORTHO05D003574 2.5e-13 80.1 199 35.2
Lj9P622T4 Lonicera japonica HOM05D003200 ORTHO05D003574 3.3e-13 79.7 114 39.5
Aa31LG1G13220 Aethionema arabicum HOM05D003200 ORTHO05D003574 4.3e-13 79.3 166 37.3
Lalb_Chr21g0307561 Lupinus albus HOM05D003200 ORTHO05D003574 4.3e-13 79.3 186 34.4
Rhsim01G0186500 Rhododendron simsii HOM05D003200 ORTHO05D003574 4.3e-13 79.3 180 36.1
Sopen01g010160 Solanum pennellii HOM05D003200 ORTHO05D003574 4.3e-13 79.3 172 35.5
Oeu043308.3 Olea europaea HOM05D003200 ORTHO05D003574 5.6e-13 79.0 202 32.7
HanXRQChr02g0056651 Helianthus annuus HOM05D003200 ORTHO05D003574 1.3e-12 77.8 120 40.0
Lalb_Chr02g0144231 Lupinus albus HOM05D003200 ORTHO05D003574 1.3e-12 77.8 201 33.3
Medtr2g061290 Medicago truncatula HOM05D003200 ORTHO05D003574 1.3e-12 77.8 196 33.7
Glyma.15G268900 Glycine max HOM05D003200 ORTHO05D003574 2.1e-12 77.0 170 33.5
CsaV3_7G031440 Cucumis sativus L. HOM05D003200 ORTHO05D003574 2.8e-12 76.6 171 33.3
AUR62019213 Chenopodium quinoa HOM05D003200 ORTHO05D003574 3.7e-12 76.3 165 37.0
ClCG09G003790 Citrullus lanatus HOM05D003200 ORTHO05D003574 3.7e-12 76.3 176 34.1
MELO3C023513.2 Cucumis melo HOM05D003200 ORTHO05D003574 3.7e-12 76.3 171 33.3
Zm00001eb190550 Zea mays HOM05D003200 ORTHO05D003574 1.1e-11 74.7 201 31.3
ATR0564G514 Amborella trichopoda HOM05D003200 ORTHO05D003574 1.4e-11 74.3 206 35.4
Glyma.08G157300 Glycine max HOM05D003200 ORTHO05D003574 2.4e-11 73.6 166 34.3
SEGI_19228 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 4.0e-11 72.8 177 35.0
Oeu058542.1 Olea europaea HOM05D003200 ORTHO05D003574 5.3e-11 72.4 182 35.7
Os02g0832600 Oryza sativa ssp. japonica HOM05D003200 ORTHO05D003574 6.9e-11 72.0 198 29.8
Zm00001eb104430 Zea mays HOM05D003200 ORTHO05D003574 9.0e-11 71.6 168 35.1
Peaxi162Scf01316g00014 Petunia axillaris HOM05D003200 ORTHO05D003574 1.5e-10 70.9 186 31.2
HPP92_005025 Vanilla planifolia HOM05D003200 ORTHO05D003574 2.0e-10 70.5 174 33.9
Phvul.005G040500 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 2.6e-10 70.1 155 34.8
DCAR_024992 Daucus carota HOM05D003200 ORTHO05D003574 4.5e-10 69.3 203 32.0
A03p28210 Brassica napus HOM05D003200 ORTHO05D003574 1.0e-09 68.2 246 30.9
Nitab4.5_0004824g0020 Nicotiana tabacum HOM05D003200 ORTHO05D003574 1.0e-09 68.2 189 30.7
PGSC0003DMG400028980 Solanum tuberosum HOM05D003200 ORTHO05D003574 1.3e-09 67.8 222 28.8
VMungo1080G1115 Vigna mungo HOM05D003200 ORTHO05D003574 2.9e-09 66.6 155 33.5
CDE04G0125 Ceratophyllum demersum HOM05D003200 ORTHO05D003574 4.9e-09 65.9 133 36.1
Os09g0553700 Oryza sativa ssp. japonica HOM05D003200 ORTHO05D003574 8.4e-09 65.1 197 29.9
Zm00001eb320760 Zea mays HOM05D003200 ORTHO05D003574 8.4e-09 65.1 162 33.3
Sopen01g033370 Solanum pennellii HOM05D003200 ORTHO05D003574 1.4e-08 64.3 222 28.4
HPP92_008488 Vanilla planifolia HOM05D003200 ORTHO05D003574 2.5e-08 63.5 183 31.7
Nn4g23231 Nelumbo nucifera HOM05D032514 ORTHO05D003574 3.2e-08 63.2 228 29.8
Solyc01g073770.2 Solanum lycopersicum HOM05D003200 ORTHO05D003574 3.2e-08 63.2 222 27.9
Cpa.g.sc189.8 Carica papaya HOM05D003200 ORTHO05D003574 5.5e-08 62.4 204 29.9
Gohir.A08G078400 Gossypium hirsutum HOM05D003200 ORTHO05D003574 1.2e-07 61.2 172 32.0
BcaB01g02851 Brassica carinata HOM05D003200 ORTHO05D003574 1.6e-07 60.8 244 29.1
BraA03t12029Z Brassica rapa HOM05D003200 ORTHO05D003574 1.6e-07 60.8 246 28.0
Sabra03G0160000 Salix brachista HOM05D003200 ORTHO05D003574 1.6e-07 60.8 190 31.1
Nn1g04523 Nelumbo nucifera HOM05D032514 ORTHO05D003574 2.7e-07 60.1 229 28.8
Pp3c6_26320 Physcomitrium patens HOM05D003200 ORTHO05D003574 6.0e-07 58.9 70 44.3
CAN.G129.43 Capsicum annuum HOM05D003200 ORTHO05D003574 7.9e-07 58.5 118 33.9
AagrBONN_evm.TU.Sc2ySwM_344.4268 Anthoceros agrestis HOM05D003200 ORTHO05D003574 1.3e-06 57.8 139 31.7
CBR_g19975 Chara braunii HOM05D003200 ORTHO05D003574 6.7e-06 55.5 89 36.0
Thhalv10029262m.g Eutrema salsugineum HOM05D003200 ORTHO05D003574 6.7e-06 55.5 163 31.9
Pp3c11_8960 Physcomitrium patens HOM05D003200 ORTHO05D003574 6.7e-06 55.5 188 29.8
Pp3c14_10980 Physcomitrium patens HOM05D003200 ORTHO05D003574 8.7e-06 55.1 166 32.5


User provided reference genes

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