Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15030 Sequoiadendron giganteum HOM05D002570 ORTHO05D002689 2.9e-77 292.0 163 100.0
Pp3c4_16391 Physcomitrium patens HOM05D002570 ORTHO05D002689 1.4e-10 70.5 66 47.0
Mapoly0080s0018 Marchantia polymorpha HOM05D006086 ORTHO05D007396 4.0e-10 68.9 72 47.2
THA.LOC104804738 Tarenaya hassleriana HOM05D002570 ORTHO05D002689 3.2e-07 59.3 62 46.8
HanXRQChr02g0033781 Helianthus annuus HOM05D002570 ORTHO05D002689 9.2e-07 57.8 66 39.4
Thhalv10003296m.g Eutrema salsugineum HOM05D002570 ORTHO05D002689 1.2e-06 57.4 79 40.5
Manes.04G097900 Manihot esculenta HOM05D002570 ORTHO05D002689 1.2e-06 57.4 70 42.9
Sp2g07930 Schrenkiella parvula HOM05D002570 ORTHO05D002689 1.2e-06 57.4 79 41.8
BcaB07g30593 Brassica carinata HOM05D002570 ORTHO05D002689 1.6e-06 57.0 78 39.7
DCAR_012810 Daucus carota HOM05D002570 ORTHO05D002689 1.6e-06 57.0 72 41.7
Sabra03G0137200 Salix brachista HOM05D002570 ORTHO05D002689 1.6e-06 57.0 86 38.4
Manes.15G028500 Manihot esculenta HOM05D006086 ORTHO05D007396 2.1e-06 56.6 64 42.2
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 2.1e-06 56.6 77 37.7
THA.LOC104812588 Tarenaya hassleriana HOM05D002570 ORTHO05D002689 2.1e-06 56.6 53 50.9
Zm00001eb400620 Zea mays HOM05D002570 ORTHO05D002689 2.1e-06 56.6 65 44.6
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 2.7e-06 56.2 68 39.7
arahy.Tifrunner.gnm1.ann1.GC569L Arachis hypogaea HOM05D006086 ORTHO05D007396 3.5e-06 55.8 64 43.8
arahy.Tifrunner.gnm1.ann1.I5363L Arachis hypogaea HOM05D006086 ORTHO05D007396 3.5e-06 55.8 64 43.8
arahy.Tifrunner.gnm1.ann1.NA8V5S Arachis hypogaea HOM05D006086 ORTHO05D007396 3.5e-06 55.8 64 40.6
A06p48010 Brassica napus HOM05D002570 ORTHO05D002689 3.5e-06 55.8 79 40.5
C07p25720 Brassica napus HOM05D002570 ORTHO05D002689 3.5e-06 55.8 79 41.8
BraA06t27671Z Brassica rapa HOM05D002570 ORTHO05D002689 3.5e-06 55.8 79 40.5
Gohir.D11G232700 Gossypium hirsutum HOM05D006086 ORTHO05D007396 3.5e-06 55.8 67 41.8
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 3.5e-06 55.8 57 42.1
BcaC06g34677 Brassica carinata HOM05D002570 ORTHO05D002689 4.6e-06 55.5 79 40.5
BolC7t43091H Brassica oleracea HOM05D002570 ORTHO05D002689 4.6e-06 55.5 79 40.5
Carub.0008s0556 Capsella rubella HOM05D002570 ORTHO05D002689 4.6e-06 55.5 65 44.6
Potri.008G152200 Populus trichocarpa HOM05D006086 ORTHO05D007396 4.6e-06 55.5 63 41.3
GSVIVG01017965001 Vitis vinifera HOM05D006086 ORTHO05D007396 4.6e-06 55.5 64 42.2
CARHR180760 Cardamine hirsuta HOM05D002570 ORTHO05D002689 6.0e-06 55.1 65 44.6
Aa31LG9G13240 Aethionema arabicum HOM05D002570 ORTHO05D002689 7.8e-06 54.7 73 42.5
Gorai.003G066200 Gossypium raimondii HOM05D006086 ORTHO05D007396 7.8e-06 54.7 67 41.8
HanXRQChr04g0099961 Helianthus annuus HOM05D002570 ORTHO05D002689 7.8e-06 54.7 58 41.4
Potri.003G187500 Populus trichocarpa HOM05D002570 ORTHO05D002689 7.8e-06 54.7 75 40.0
HPP92_012494 Vanilla planifolia HOM05D002570 ORTHO05D002689 7.8e-06 54.7 71 39.4


User provided reference genes

Program Settings