Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 8.9e-218 760.0 387 100.0
SEGI_02198 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 6.2e-70 268.9 181 80.1
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 1.8e-53 214.2 406 37.2
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 4.5e-52 209.5 392 37.0
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 3.8e-51 206.5 394 36.5
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 5.0e-51 206.1 388 35.6
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 5.0e-51 206.1 393 36.1
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 2.5e-50 203.8 390 35.6
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 3.0e-48 196.8 399 35.3
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 6.7e-48 195.7 396 35.4
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 6.7e-48 195.7 396 34.3
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 2.6e-47 193.7 390 35.9
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 3.3e-47 193.4 376 35.6
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 2.2e-46 190.7 388 33.5
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 3.7e-46 189.9 391 32.5
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 8.2e-46 188.7 396 34.3
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.4e-45 188.0 395 33.9
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.8e-45 187.6 390 33.6
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 4.1e-45 186.4 393 33.6
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.0e-44 184.1 389 34.4
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 2.6e-44 183.7 389 34.7
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 5.9e-44 182.6 389 32.9
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.7e-43 181.0 396 34.3
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 2.2e-43 180.6 402 32.3
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.2e-43 180.6 388 34.8
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.8e-43 179.9 384 33.6
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.8e-43 179.9 384 33.6
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 3.8e-43 179.9 390 33.1
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 6.5e-43 179.1 390 32.3
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 8.5e-43 178.7 385 33.2
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 8.5e-43 178.7 384 33.1
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.4e-42 177.9 393 32.6
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.4e-42 177.9 390 33.1
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 1.4e-42 177.9 387 32.3
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 2.5e-42 177.2 383 30.5
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.5e-42 177.2 390 33.3
SEGI_11687 Sequoiadendron giganteum HOM05D003404 ORTHO05D000003 5.5e-42 176.0 110 79.1
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 7.2e-42 175.6 397 33.5
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.2e-41 174.9 400 32.5
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.2e-41 174.9 390 33.1
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 1.6e-41 174.5 388 32.2
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.1e-41 174.1 389 34.2
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 2.7e-41 173.7 398 32.9
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 3.6e-41 173.3 388 33.2
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 4.7e-41 172.9 387 31.8
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 6.1e-41 172.6 383 33.2
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 6.1e-41 172.6 383 33.2
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 8.0e-41 172.2 383 32.9
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.8e-40 171.0 396 32.6
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.8e-40 171.0 392 32.1
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 3.9e-40 169.9 388 33.8
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 5.2e-40 169.5 388 31.4
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 8.8e-40 168.7 390 31.3
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 1.1e-39 168.3 375 32.3
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.5e-39 167.9 388 32.5
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.5e-39 167.9 387 31.8
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.5e-39 167.9 385 34.0
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 2.0e-39 167.5 378 32.5
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.6e-39 167.2 388 33.5
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 4.4e-39 166.4 389 31.4
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 4.4e-39 166.4 397 30.5
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 4.4e-39 166.4 397 30.5
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 5.7e-39 166.0 394 31.5
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 7.4e-39 165.6 378 33.9
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 7.4e-39 165.6 397 31.2
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 9.7e-39 165.2 397 31.0
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 1.7e-38 164.5 390 30.8
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 2.2e-38 164.1 396 31.3
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 2.2e-38 164.1 394 31.0
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 6.3e-38 162.5 389 32.9
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 1.1e-37 161.8 389 32.9
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 1.8e-37 161.0 379 31.1
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 1.8e-37 161.0 392 30.4
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 1.8e-37 161.0 393 31.0
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 2.4e-37 160.6 393 31.3
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 3.1e-37 160.2 390 30.3
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 3.1e-37 160.2 400 32.5
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 4.1e-37 159.8 396 30.6
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 7.0e-37 159.1 388 32.2
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 7.0e-37 159.1 389 32.4
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 9.1e-37 158.7 397 30.5
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 3.5e-36 156.8 398 30.9
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.0e-35 155.2 389 31.1
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 1.7e-35 154.5 392 31.4
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 1.7e-35 154.5 389 30.8
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 2.2e-35 154.1 377 32.1
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 6.5e-35 152.5 390 31.5
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 1.9e-34 151.0 396 31.1
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 2.5e-34 150.6 389 30.3
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 2.5e-34 150.6 379 33.2
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 5.5e-34 149.4 390 31.3
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 9.4e-34 148.7 438 32.4
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 9.4e-34 148.7 378 31.7
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.7e-33 147.1 373 32.2
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 3.6e-33 146.7 394 29.9
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 3.0e-32 143.7 408 29.7
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 2.0e-31 141.0 394 29.7
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 3.4e-31 140.2 388 29.6
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 5.7e-31 139.4 376 29.3
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.4e-29 134.8 377 29.2
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 3.1e-29 133.7 384 30.7
SEGI_10643 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 3.5e-28 130.2 103 64.1
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 5.9e-28 129.4 371 27.5
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 9.4e-26 122.1 347 29.1
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 9.4e-26 122.1 172 39.5
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 1.8e-24 117.9 415 26.5
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 8.3e-22 109.0 292 29.1
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 1.4e-21 108.2 391 27.6
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 7.0e-21 105.9 384 24.7
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 5.9e-20 102.8 138 40.6
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.9e-18 97.8 155 37.4
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.3e-18 97.1 139 42.4
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.6e-17 94.7 158 35.4
SEGI_20214 Sequoiadendron giganteum HOM05D003289 ORTHO05D000003 1.0e-16 92.0 126 47.6
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 1.8e-16 91.3 390 25.6
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 2.6e-15 87.4 367 26.2
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.0e-12 77.8 251 31.9
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 1.0e-08 65.5 241 27.0
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 5.2e-08 63.2 106 38.7
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 5.8e-07 59.7 35 88.6


User provided reference genes

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