Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14927 Sequoiadendron giganteum HOM05D004452 ORTHO05D005358 4.1e-51 204.5 109 100.0
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 3.5e-10 68.6 53 66.0
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 3.5e-10 68.6 51 64.7
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 4.6e-10 68.2 50 64.0
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 4.6e-10 68.2 50 66.0
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 6.0e-10 67.8 48 66.7
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 1.3e-09 66.6 50 62.0
TAR625G1031 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.7e-09 66.2 51 62.7
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 3.0e-09 65.5 50 62.0
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 5.6e-08 61.2 52 53.8
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 7.3e-08 60.8 50 56.0
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 2.1e-07 59.3 50 54.0
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 2.1e-07 59.3 50 54.0
CANSAT11G0118 Cannabis sativa HOM05D004452 ORTHO05D005358 2.8e-07 58.9 47 57.4
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 2.8e-07 58.9 50 52.0
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 2.8e-07 58.9 57 50.9
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 3.6e-07 58.5 51 56.9
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 3.6e-07 58.5 50 52.0
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 6.2e-07 57.8 50 50.0
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 6.2e-07 57.8 50 50.0
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 6.2e-07 57.8 50 52.0
Dinv35952 Davidia involucrata HOM05D004452 ORTHO05D005358 8.0e-07 57.4 50 52.0
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.1e-06 57.0 50 50.0
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 1.1e-06 57.0 50 52.0
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 1.4e-06 56.6 50 50.0
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 1.4e-06 56.6 50 52.0
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 1.4e-06 56.6 49 55.1
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 1.8e-06 56.2 52 48.1
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 2.3e-06 55.8 50 52.0
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 2.3e-06 55.8 50 50.0
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 4.0e-06 55.1 50 50.0
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 6.8e-06 54.3 50 46.0
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 6.8e-06 54.3 50 50.0
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 8.9e-06 53.9 50 46.0


User provided reference genes

Program Settings