Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 4.4e-270 934.1 490 100.0
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 8.4e-213 743.8 386 100.0
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.3e-194 683.3 457 77.0
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.5e-180 636.0 469 68.7
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 2.8e-99 366.7 458 43.2
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 2.6e-97 360.1 463 42.5
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 7.6e-97 358.6 480 42.3
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 4.9e-96 355.9 439 41.5
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 2.7e-94 350.1 438 43.8
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 8.7e-93 345.1 481 40.3
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.5e-92 344.4 482 40.5
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 1.5e-92 344.4 467 40.0
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.9e-92 344.0 467 41.5
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.6e-92 342.4 440 42.5
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.3e-91 341.3 481 40.1
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.6e-91 340.9 454 41.9
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 2.1e-91 340.5 495 40.6
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 3.6e-91 339.7 454 40.5
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 6.2e-91 339.0 456 41.2
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.4e-90 337.8 444 41.7
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 3.1e-90 336.7 454 40.5
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 5.3e-90 335.9 454 40.3
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 9.0e-90 335.1 482 39.6
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 1.2e-89 334.7 443 40.0
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 2.6e-89 333.6 477 40.3
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.4e-89 333.2 445 40.4
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 4.5e-89 332.8 446 40.6
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 4.5e-89 332.8 464 40.3
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 5.8e-89 332.4 445 40.0
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 5.8e-89 332.4 439 41.5
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 9.9e-89 331.6 439 41.0
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 1.3e-88 331.3 448 41.1
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.2e-88 330.5 439 41.7
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.9e-88 330.1 446 40.6
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 3.8e-88 329.7 446 40.4
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 4.9e-88 329.3 482 39.8
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 4.9e-88 329.3 482 40.2
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 4.9e-88 329.3 447 41.4
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 6.4e-88 328.9 479 39.0
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 8.4e-88 328.6 441 42.0
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 8.4e-88 328.6 443 40.9
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.4e-87 327.8 468 39.3
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.4e-87 327.0 451 41.2
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 3.2e-87 326.6 465 40.0
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 4.2e-87 326.2 440 40.2
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 5.5e-87 325.9 439 39.9
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 7.1e-87 325.5 464 39.4
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.6e-86 324.3 440 41.4
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.6e-86 324.3 477 40.0
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 2.1e-86 323.9 446 39.7
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.5e-86 323.2 440 40.2
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 3.5e-86 323.2 440 40.0
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 4.6e-86 322.8 460 38.7
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 6.0e-86 322.4 444 40.3
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 7.9e-86 322.0 449 39.2
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 1.8e-85 320.9 498 38.2
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 5.1e-85 319.3 484 38.2
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 1.1e-84 318.2 449 39.4
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.5e-84 317.8 475 38.9
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 4.3e-84 316.2 458 40.4
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 4.3e-84 316.2 483 39.3
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 9.6e-84 315.1 449 39.9
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 1.3e-83 314.7 404 41.6
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 1.6e-83 314.3 484 37.2
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 1.6e-83 314.3 480 40.0
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.6e-83 314.3 440 39.8
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 2.1e-83 313.9 443 38.1
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 2.1e-83 313.9 506 37.2
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.8e-83 313.5 405 41.5
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 3.7e-83 313.2 480 38.5
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 3.7e-83 313.2 449 37.9
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 8.1e-83 312.0 404 40.3
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.8e-82 310.8 480 38.3
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 3.1e-82 310.1 407 41.0
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 6.9e-82 308.9 480 38.1
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 2.0e-81 307.4 480 37.7
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 4.5e-81 306.2 480 37.9
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 4.5e-81 306.2 480 37.9
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 1.0e-80 305.1 449 39.2
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 1.0e-80 305.1 406 39.2
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 1.3e-80 304.7 499 37.1
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.9e-80 303.5 411 38.9
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 6.5e-80 302.4 405 39.0
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 5.5e-79 299.3 472 37.7
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 9.3e-79 298.5 406 38.4
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 2.7e-78 297.0 454 37.2
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.8e-77 294.3 420 39.0
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.8e-77 294.3 406 37.9
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 3.3e-76 290.0 400 39.2
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 7.4e-76 288.9 529 34.2
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 2.8e-75 287.0 411 38.7
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 1.1e-74 285.0 538 34.9
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 1.8e-74 284.3 405 39.0
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 5.9e-73 279.3 451 37.0
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 2.9e-72 276.9 405 36.8
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 3.2e-71 273.5 407 35.9
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 9.3e-71 271.9 376 39.6
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 2.5e-68 263.8 444 33.8
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 4.8e-67 259.6 447 36.2
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 6.3e-67 259.2 460 35.9
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 8.2e-67 258.8 369 41.2
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.4e-66 257.3 447 35.6
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 6.9e-66 255.8 354 39.8
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 9.0e-66 255.4 318 45.9
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 2.9e-64 250.4 380 38.9
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 2.9e-64 250.4 380 38.9
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 5.0e-64 249.6 332 40.7
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 5.0e-64 249.6 473 35.1
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 8.5e-64 248.8 367 40.1
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 8.5e-64 248.8 354 40.7
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 1.9e-63 247.7 361 39.1
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 3.6e-62 243.4 411 35.3
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 6.1e-62 242.7 439 32.8
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.9e-62 242.3 127 100.0
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 2.3e-61 240.7 268 47.0
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 8.8e-61 238.8 361 37.1
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 4.8e-59 233.0 456 34.9
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 3.4e-57 226.9 374 36.6
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 1.0e-53 215.3 311 40.2
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 5.1e-53 213.0 435 34.7
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 3.1e-50 203.8 291 37.8
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 1.0e-48 198.7 246 45.1
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 9.7e-44 182.2 384 31.8
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.7e-43 180.3 403 33.0
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 1.9e-31 141.4 332 30.4
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 2.8e-22 110.9 157 39.5
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.0e-16 92.4 153 37.9
SEGI_03720 Sequoiadendron giganteum HOM05D005756 ORTHO05D386902 6.6e-08 63.2 66 54.5


User provided reference genes

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